RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PSMB2P49721 201 aa15.02■□□□□ -0
NME3-209ENST00000566600 PPDPFLQ8WWR9 84 aa15.02■□□□□ -0
NME3-209ENST00000566600 A0A1B0GX51 115 aa15.01□□□□□ -0.01
NME3-209ENST00000566600 RPS29P62273 56 aaKnown RBP15.01□□□□□ -0.01
NME3-209ENST00000566600 COX6CP09669 75 aa15□□□□□ -0.01
NME3-209ENST00000566600 OCIAD2Q56VL3 154 aa15□□□□□ -0.01
NME3-209ENST00000566600 FAM218AQ96MZ4 157 aa14.99□□□□□ -0.01
NME3-209ENST00000566600 F8WEM9 126 aa14.98□□□□□ -0.01
NME3-209ENST00000566600 GHRHP01286 108 aa14.95□□□□□ -0.02
NME3-209ENST00000566600 RETNLBQ9BQ08 111 aa14.94□□□□□ -0.02
NME3-209ENST00000566600 CD164Q04900 197 aa14.92□□□□□ -0.02
NME3-209ENST00000566600 SNHG12Q9BXW3 62 aa14.92□□□□□ -0.02
NME3-209ENST00000566600 CLEC2BQ92478 149 aa14.9□□□□□ -0.02
NME3-209ENST00000566600 DNAL4O96015 105 aa14.87□□□□□ -0.03
NME3-209ENST00000566600 Q6JHZ5 121 aa14.87□□□□□ -0.03
NME3-209ENST00000566600 LIMD2Q9BT23 127 aa14.87□□□□□ -0.03
NME3-209ENST00000566600 IGLV8-61A0A075B6I0 122 aa14.86□□□□□ -0.03
NME3-209ENST00000566600 SCGB1C2P0DMR2 95 aa14.86□□□□□ -0.03
NME3-209ENST00000566600 HRCT1Q6UXD1 115 aa14.86□□□□□ -0.03
NME3-209ENST00000566600 FP248Q71RG6 208 aaPredicted RBP14.86□□□□□ -0.03
NME3-209ENST00000566600 IGLV7-46A0A075B6I9 117 aa14.83□□□□□ -0.04
NME3-209ENST00000566600 H3BQ85 93 aa14.82□□□□□ -0.04
NME3-209ENST00000566600 ORMDL1Q9P0S3 153 aa14.8□□□□□ -0.04
NME3-209ENST00000566600 LRP2P98164 4655 aa14.79□□□□□ -0.04
NME3-209ENST00000566600 NDUFV3P56181 108 aaKnown RBP14.79□□□□□ -0.04
NME3-209ENST00000566600 A0A0G2JQZ4 141 aa14.78□□□□□ -0.04
NME3-209ENST00000566600 FABP2P12104 132 aa14.78□□□□□ -0.04
NME3-209ENST00000566600 TRACP01848 142 aa14.77□□□□□ -0.05
NME3-209ENST00000566600 BATFQ16520 125 aa14.77□□□□□ -0.05
NME3-209ENST00000566600 LST1O00453 97 aa14.76□□□□□ -0.05
NME3-209ENST00000566600 IGFL1Q6UW32 110 aa14.76□□□□□ -0.05
NME3-209ENST00000566600 Q5XG85 94 aa14.75□□□□□ -0.05
NME3-209ENST00000566600 TPRXLQ17RH7 258 aa14.74□□□□□ -0.05
NME3-209ENST00000566600 H3BUT2 72 aa14.73□□□□□ -0.05
NME3-209ENST00000566600 TMEM256-PLSCR3K7ERE1 68 aa14.73□□□□□ -0.05
NME3-209ENST00000566600 H3BMG7 143 aa14.7□□□□□ -0.06
NME3-209ENST00000566600 LPAP08519 4548 aa14.69□□□□□ -0.06
NME3-209ENST00000566600 TCL1BO95988 128 aa14.68□□□□□ -0.06
NME3-209ENST00000566600 LYRM7Q5U5X0 104 aa14.68□□□□□ -0.06
NME3-209ENST00000566600 NAA38Q9BRA0 125 aaKnown RBP14.68□□□□□ -0.06
NME3-209ENST00000566600 ATXN8Q156A1 80 aa14.66□□□□□ -0.06
NME3-209ENST00000566600 TRBV7-7A0A0K0K1E9 115 aa14.65□□□□□ -0.06
NME3-209ENST00000566600 UBE2V1Q13404 147 aa14.64□□□□□ -0.07
NME3-209ENST00000566600 CDIP1Q9H305 208 aa14.64□□□□□ -0.07
NME3-209ENST00000566600 Q6Q795 121 aa14.61□□□□□ -0.07
NME3-209ENST00000566600 UBR4Q5T4S7 5183 aa14.61□□□□□ -0.07
NME3-209ENST00000566600 KRTAP13-3Q3SY46 172 aa14.6□□□□□ -0.07
NME3-209ENST00000566600 TEN1Q86WV5 123 aa14.6□□□□□ -0.07
NME3-209ENST00000566600 TRBV20-1A0A075B6N2 111 aa14.58□□□□□ -0.08
NME3-209ENST00000566600 C9orf118A6NHY6 69 aa14.58□□□□□ -0.08
NME3-209ENST00000566600 BAALC-AS2P0C853 105 aa14.58□□□□□ -0.08
NME3-209ENST00000566600 C1orf195Q5TG92 126 aa14.58□□□□□ -0.08
NME3-209ENST00000566600 ASB16-AS1Q495Z4 193 aa14.57□□□□□ -0.08
NME3-209ENST00000566600 ANKRD29Q8N6D5 301 aa14.56□□□□□ -0.08
NME3-209ENST00000566600 TAX1BP3O14907 124 aa14.55□□□□□ -0.08
NME3-209ENST00000566600 SS18L2Q9UHA2 77 aa14.53□□□□□ -0.08
NME3-209ENST00000566600 A0A1B0GV72 72 aa14.51□□□□□ -0.09
NME3-209ENST00000566600 A0A1W2PPM0 123 aa14.49□□□□□ -0.09
NME3-209ENST00000566600 RBM3P98179 157 aaKnown RBP14.48□□□□□ -0.09
NME3-209ENST00000566600 A0A1W2PNM2 257 aa14.47□□□□□ -0.09
NME3-209ENST00000566600 COL5A1-AS1Q5SY13 56 aa14.46□□□□□ -0.09
NME3-209ENST00000566600 TRBV7-4A0A0J9YYF1 115 aa14.45□□□□□ -0.1
NME3-209ENST00000566600 DSCR8Q96T75 97 aa14.45□□□□□ -0.1
NME3-209ENST00000566600 A0A087WSZ3 146 aa14.44□□□□□ -0.1
NME3-209ENST00000566600 C9JAW5 83 aa14.42□□□□□ -0.1
NME3-209ENST00000566600 CCKP06307 115 aa14.42□□□□□ -0.1
NME3-209ENST00000566600 JMJD7-PLA2G4BH0Y9G9 81 aa14.41□□□□□ -0.1
NME3-209ENST00000566600 PCP4L1A6NKN8 68 aa14.39□□□□□ -0.11
NME3-209ENST00000566600 C9orf92A6NGG3 77 aa14.36□□□□□ -0.11
NME3-209ENST00000566600 XP32Q5T750 250 aa14.35□□□□□ -0.11
NME3-209ENST00000566600 VPS25Q9BRG1 176 aa14.33□□□□□ -0.12
NME3-209ENST00000566600 SPCS1Q9Y6A9 102 aa14.33□□□□□ -0.12
NME3-209ENST00000566600 H3BT86 120 aa14.32□□□□□ -0.12
NME3-209ENST00000566600 C21orf62-AS1Q17RA5 79 aa14.31□□□□□ -0.12
NME3-209ENST00000566600 PDE6GP18545 87 aa14.3□□□□□ -0.12
NME3-209ENST00000566600 SEC61BP60468 96 aaKnown RBP14.29□□□□□ -0.12
NME3-209ENST00000566600 LOC110117498A0A087WWA1 95 aa14.28□□□□□ -0.12
NME3-209ENST00000566600 Q96NJ1 140 aa14.27□□□□□ -0.13
NME3-209ENST00000566600 OBSCN-AS1Q96MR7 158 aa14.26□□□□□ -0.13
NME3-209ENST00000566600 Q6ZQT0 140 aa14.25□□□□□ -0.13
NME3-209ENST00000566600 RNF213Q63HN8 5207 aa14.25□□□□□ -0.13
NME3-209ENST00000566600 A0A1B0GW54 56 aa14.23□□□□□ -0.13
NME3-209ENST00000566600 MTURNQ8N3F0 131 aa14.22□□□□□ -0.13
NME3-209ENST00000566600 C14orf132Q9NPU4 83 aa14.22□□□□□ -0.13
NME3-209ENST00000566600 MUC17Q685J3 4493 aa14.19□□□□□ -0.14
NME3-209ENST00000566600 SIGMAR1Q99720 223 aa14.18□□□□□ -0.14
NME3-209ENST00000566600 LINC00472Q9H8W2 130 aa14.18□□□□□ -0.14
NME3-209ENST00000566600 K7EP34 96 aa14.17□□□□□ -0.14
NME3-209ENST00000566600 IGKV4-1P06312 121 aa14.17□□□□□ -0.14
NME3-209ENST00000566600 GTF2H5Q6ZYL4 71 aa14.11□□□□□ -0.15
NME3-209ENST00000566600 RPL37P61927 97 aaKnown RBP14.1□□□□□ -0.15
NME3-209ENST00000566600 DEFB116Q30KQ4 102 aa14.09□□□□□ -0.15
NME3-209ENST00000566600 J3KT08 172 aa14.07□□□□□ -0.16
NME3-209ENST00000566600 SMCPP49901 116 aaPredicted RBP14.07□□□□□ -0.16
NME3-209ENST00000566600 A0A0U1RQV1 116 aa14.06□□□□□ -0.16
NME3-209ENST00000566600 PRO0461Q9UI25 63 aa14.06□□□□□ -0.16
NME3-209ENST00000566600 PCOTHQ58A44 107 aa14.05□□□□□ -0.16
NME3-209ENST00000566600 MUC2Q02817 5179 aa14.04□□□□□ -0.16
NME3-209ENST00000566600 LINC00313P59037 77 aa14.02□□□□□ -0.17
NME3-209ENST00000566600 DSCR10P59022 87 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms