RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 DEFB133Q30KQ1 61 aa2.33□□□□□ -2.04
CHD9-206ENST00000562791 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
CHD9-206ENST00000562791 R4GN34 69 aa2.33□□□□□ -2.04
CHD9-206ENST00000562791 ZFHX2Q9C0A1 2572 aaPredicted RBP2.32□□□□□ -2.04
CHD9-206ENST00000562791 COL6A6A6NMZ7 2263 aa2.32□□□□□ -2.04
CHD9-206ENST00000562791 INE1O15225 51 aa2.32□□□□□ -2.04
CHD9-206ENST00000562791 LY6EQ16553 131 aa2.32□□□□□ -2.04
CHD9-206ENST00000562791 TPRP12270 2363 aaKnown RBP2.31□□□□□ -2.04
CHD9-206ENST00000562791 DEFB119Q8N690 84 aa2.31□□□□□ -2.04
CHD9-206ENST00000562791 CACNA1EQ15878 2313 aa2.31□□□□□ -2.04
CHD9-206ENST00000562791 HIVEP2P31629 2446 aa2.3□□□□□ -2.04
CHD9-206ENST00000562791 RPL37P61927 97 aaKnown RBP2.3□□□□□ -2.04
CHD9-206ENST00000562791 SETXQ7Z333 2677 aaKnown RBP2.3□□□□□ -2.04
CHD9-206ENST00000562791 LYNX1P0DP58 116 aa2.29□□□□□ -2.04
CHD9-206ENST00000562791 Q6ZRN7 208 aaPredicted RBP2.29□□□□□ -2.04
CHD9-206ENST00000562791 MAST4O15021 2626 aa2.29□□□□□ -2.04
CHD9-206ENST00000562791 DEFB130BP0DP73 79 aa2.28□□□□□ -2.04
CHD9-206ENST00000562791 DEFB130AP0DP74 79 aa2.28□□□□□ -2.04
CHD9-206ENST00000562791 C10orf99Q6UWK7 81 aa2.28□□□□□ -2.04
CHD9-206ENST00000562791 IGF2RP11717 2491 aa2.28□□□□□ -2.04
CHD9-206ENST00000562791 CHD7Q9P2D1 2997 aa2.28□□□□□ -2.05
CHD9-206ENST00000562791 GOLGB1Q14789 3259 aaKnown RBP2.27□□□□□ -2.05
CHD9-206ENST00000562791 NOP10Q9NPE3 64 aaKnown RBP2.27□□□□□ -2.05
CHD9-206ENST00000562791 ZFHX4Q86UP3 3567 aa2.26□□□□□ -2.05
CHD9-206ENST00000562791 CENPFP49454 3210 aa2.26□□□□□ -2.05
CHD9-206ENST00000562791 K7EIL1 84 aa2.25□□□□□ -2.05
CHD9-206ENST00000562791 C10orf95Q9H7T3 257 aa2.25□□□□□ -2.05
CHD9-206ENST00000562791 PRO0255Q9UI72 69 aa2.25□□□□□ -2.05
CHD9-206ENST00000562791 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
CHD9-206ENST00000562791 SPTBN2O15020 2390 aa2.24□□□□□ -2.05
CHD9-206ENST00000562791 LELP1Q5T871 98 aa2.23□□□□□ -2.05
CHD9-206ENST00000562791 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
CHD9-206ENST00000562791 FLG2Q5D862 2391 aaPredicted RBP2.23□□□□□ -2.05
CHD9-206ENST00000562791 USP9XQ93008 2570 aaPredicted RBP2.22□□□□□ -2.05
CHD9-206ENST00000562791 ZDBF2Q9HCK1 2354 aa2.22□□□□□ -2.05
CHD9-206ENST00000562791 BRD3OSQ6XYD6 125 aa2.22□□□□□ -2.05
CHD9-206ENST00000562791 U3KQA8 63 aa2.22□□□□□ -2.05
CHD9-206ENST00000562791 CFAP54Q96N23 3096 aa2.22□□□□□ -2.05
CHD9-206ENST00000562791 ACACAQ13085 2346 aa2.22□□□□□ -2.05
CHD9-206ENST00000562791 PCNX1Q96RV3 2341 aa2.21□□□□□ -2.06
CHD9-206ENST00000562791 PRLHP81277 87 aa2.2□□□□□ -2.06
CHD9-206ENST00000562791 DEFB136Q30KP8 78 aa2.2□□□□□ -2.06
CHD9-206ENST00000562791 UBE2DNLQ8IWF7 75 aa2.2□□□□□ -2.06
CHD9-206ENST00000562791 AKAP6Q13023 2319 aa2.2□□□□□ -2.06
CHD9-206ENST00000562791 TNRC18O15417 2968 aaPredicted RBP2.2□□□□□ -2.06
CHD9-206ENST00000562791 ZZEF1O43149 2961 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 NBEAQ8NFP9 2946 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 PKDREJQ9NTG1 2253 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 DEFB103AP81534 67 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 FBN3Q75N90 2809 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 SPTA1P02549 2419 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 UTRNP46939 3433 aa2.19□□□□□ -2.06
CHD9-206ENST00000562791 VPS13AQ96RL7 3174 aa2.18□□□□□ -2.06
CHD9-206ENST00000562791 CEP250Q9BV73 2442 aa2.18□□□□□ -2.06
CHD9-206ENST00000562791 FAM186AA6NE01 2351 aa2.17□□□□□ -2.06
CHD9-206ENST00000562791 PTPN13Q12923 2485 aa2.17□□□□□ -2.06
CHD9-206ENST00000562791 OTOGQ6ZRI0 2925 aa2.17□□□□□ -2.06
CHD9-206ENST00000562791 TENM2Q9NT68 2774 aa2.17□□□□□ -2.06
CHD9-206ENST00000562791 MAP1BP46821 2468 aaKnown RBP2.15□□□□□ -2.06
CHD9-206ENST00000562791 GPR179Q6PRD1 2367 aa2.15□□□□□ -2.06
CHD9-206ENST00000562791 TEP1Q99973 2627 aaKnown RBP2.15□□□□□ -2.06
CHD9-206ENST00000562791 SPINK1P00995 79 aa2.15□□□□□ -2.07
CHD9-206ENST00000562791 PTPRZ1P23471 2315 aaPredicted RBP2.15□□□□□ -2.07
CHD9-206ENST00000562791 CHD6Q8TD26 2715 aa2.15□□□□□ -2.07
CHD9-206ENST00000562791 PIEZO2Q9H5I5 2752 aa2.15□□□□□ -2.07
CHD9-206ENST00000562791 APC2O95996 2303 aa2.14□□□□□ -2.07
CHD9-206ENST00000562791 ASH1LQ9NR48 2969 aaKnown RBP2.14□□□□□ -2.07
CHD9-206ENST00000562791 RANBP2P49792 3224 aaKnown RBP2.14□□□□□ -2.07
CHD9-206ENST00000562791 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
CHD9-206ENST00000562791 S4R3F8 94 aa2.14□□□□□ -2.07
CHD9-206ENST00000562791 NAV2Q8IVL1 2488 aa2.14□□□□□ -2.07
CHD9-206ENST00000562791 PRUNE2Q8WUY3 3088 aa2.14□□□□□ -2.07
CHD9-206ENST00000562791 FLNBO75369 2602 aaKnown RBP2.13□□□□□ -2.07
CHD9-206ENST00000562791 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
CHD9-206ENST00000562791 SPTBN4Q9H254 2564 aa2.13□□□□□ -2.07
CHD9-206ENST00000562791 SZT2Q5T011 3432 aa2.13□□□□□ -2.07
CHD9-206ENST00000562791 A0A096LPF7 62 aa2.12□□□□□ -2.07
CHD9-206ENST00000562791 LAMA2P24043 3122 aaKnown RBP2.12□□□□□ -2.07
CHD9-206ENST00000562791 CFAP47Q6ZTR5 3102 aa2.12□□□□□ -2.07
CHD9-206ENST00000562791 FRYLO94915 3013 aa2.11□□□□□ -2.07
CHD9-206ENST00000562791 MKI67P46013 3256 aaKnown RBP2.11□□□□□ -2.07
CHD9-206ENST00000562791 GVINP1Q7Z2Y8 2422 aa2.11□□□□□ -2.07
CHD9-206ENST00000562791 ANKRD11Q6UB99 2663 aaPredicted RBP2.11□□□□□ -2.07
CHD9-206ENST00000562791 C2CD3Q4AC94 2353 aa2.1□□□□□ -2.07
CHD9-206ENST00000562791 SPTBN5Q9NRC6 3674 aaKnown RBP2.1□□□□□ -2.07
CHD9-206ENST00000562791 H3BNG1 76 aa2.1□□□□□ -2.07
CHD9-206ENST00000562791 BDP1A6H8Y1 2624 aa2.1□□□□□ -2.07
CHD9-206ENST00000562791 ABCA2Q9BZC7 2435 aa2.1□□□□□ -2.07
CHD9-206ENST00000562791 FN1P02751 2386 aaKnown RBP2.09□□□□□ -2.07
CHD9-206ENST00000562791 KRTAP13-2Q52LG2 175 aa2.09□□□□□ -2.07
CHD9-206ENST00000562791 MYO18BQ8IUG5 2567 aa2.09□□□□□ -2.07
CHD9-206ENST00000562791 WDFY4Q6ZS81 3184 aa2.08□□□□□ -2.08
CHD9-206ENST00000562791 CELSR2Q9HCU4 2923 aa2.08□□□□□ -2.08
CHD9-206ENST00000562791 LINC01556Q5JQF7 62 aa2.08□□□□□ -2.08
CHD9-206ENST00000562791 APLNQ9ULZ1 77 aa2.08□□□□□ -2.08
CHD9-206ENST00000562791 FASNP49327 2511 aaKnown RBP2.08□□□□□ -2.08
CHD9-206ENST00000562791 CACNA1HO95180 2353 aa2.07□□□□□ -2.08
CHD9-206ENST00000562791 NCOR1O75376 2440 aa2.07□□□□□ -2.08
CHD9-206ENST00000562791 DOPEY1Q5JWR5 2465 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms