RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 KRTAP13-3Q3SY46 172 aa11.62□□□□□ -0.55
TPM1-232ENST00000561425 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
TPM1-232ENST00000561425 C9orf153Q5TBE3 101 aa11.61□□□□□ -0.55
TPM1-232ENST00000561425 SLC25A20O43772 301 aa11.6□□□□□ -0.55
TPM1-232ENST00000561425 TRIAP1O43715 76 aa11.58□□□□□ -0.56
TPM1-232ENST00000561425 LINC01547P58512 204 aaPredicted RBP11.58□□□□□ -0.56
TPM1-232ENST00000561425 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
TPM1-232ENST00000561425 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
TPM1-232ENST00000561425 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
TPM1-232ENST00000561425 COX6CP09669 75 aa11.57□□□□□ -0.56
TPM1-232ENST00000561425 H0YGX0 51 aa11.56□□□□□ -0.56
TPM1-232ENST00000561425 SMIM29Q86T20 159 aa11.56□□□□□ -0.56
TPM1-232ENST00000561425 COL5A1-AS1Q5SY13 56 aa11.55□□□□□ -0.56
TPM1-232ENST00000561425 SCGB1C2P0DMR2 95 aa11.53□□□□□ -0.56
TPM1-232ENST00000561425 NAA38Q9BRA0 125 aaKnown RBP11.53□□□□□ -0.56
TPM1-232ENST00000561425 LINC00575Q6W349 94 aa11.52□□□□□ -0.57
TPM1-232ENST00000561425 DEFB105AQ8NG35 78 aa11.52□□□□□ -0.57
TPM1-232ENST00000561425 TAX1BP3O14907 124 aa11.51□□□□□ -0.57
TPM1-232ENST00000561425 SNCGO76070 127 aa11.51□□□□□ -0.57
TPM1-232ENST00000561425 CD164Q04900 197 aa11.51□□□□□ -0.57
TPM1-232ENST00000561425 hADV29S1A0JD25 119 aa11.5□□□□□ -0.57
TPM1-232ENST00000561425 C9orf118A6NHY6 69 aa11.49□□□□□ -0.57
TPM1-232ENST00000561425 H3BUT2 72 aa11.49□□□□□ -0.57
TPM1-232ENST00000561425 LYRM7Q5U5X0 104 aa11.49□□□□□ -0.57
TPM1-232ENST00000561425 CLEC2BQ92478 149 aa11.48□□□□□ -0.57
TPM1-232ENST00000561425 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
TPM1-232ENST00000561425 A0A1B0GX51 115 aa11.46□□□□□ -0.57
TPM1-232ENST00000561425 ASB16-AS1Q495Z4 193 aa11.46□□□□□ -0.57
TPM1-232ENST00000561425 FAM218AQ96MZ4 157 aa11.46□□□□□ -0.57
TPM1-232ENST00000561425 LIMD2Q9BT23 127 aa11.46□□□□□ -0.57
TPM1-232ENST00000561425 Q5XG85 94 aa11.45□□□□□ -0.58
TPM1-232ENST00000561425 HRCT1Q6UXD1 115 aa11.43□□□□□ -0.58
TPM1-232ENST00000561425 DNAL4O96015 105 aa11.42□□□□□ -0.58
TPM1-232ENST00000561425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.42□□□□□ -0.58
TPM1-232ENST00000561425 Q6ZQY7 126 aa11.42□□□□□ -0.58
TPM1-232ENST00000561425 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
TPM1-232ENST00000561425 FABP2P12104 132 aa11.41□□□□□ -0.58
TPM1-232ENST00000561425 XP32Q5T750 250 aa11.41□□□□□ -0.58
TPM1-232ENST00000561425 LST1O00453 97 aa11.4□□□□□ -0.58
TPM1-232ENST00000561425 ATXN8Q156A1 80 aa11.39□□□□□ -0.59
TPM1-232ENST00000561425 TRBV20-1A0A075B6N2 111 aa11.38□□□□□ -0.59
TPM1-232ENST00000561425 TCL1BO95988 128 aa11.38□□□□□ -0.59
TPM1-232ENST00000561425 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
TPM1-232ENST00000561425 TRACP01848 142 aa11.37□□□□□ -0.59
TPM1-232ENST00000561425 FAT4Q6V0I7 4981 aa11.36□□□□□ -0.59
TPM1-232ENST00000561425 A0A0G2JQZ4 141 aa11.36□□□□□ -0.59
TPM1-232ENST00000561425 SEC61BP60468 96 aaKnown RBP11.36□□□□□ -0.59
TPM1-232ENST00000561425 OCIAD2Q56VL3 154 aa11.36□□□□□ -0.59
TPM1-232ENST00000561425 GHRHP01286 108 aa11.35□□□□□ -0.59
TPM1-232ENST00000561425 IGLV8-61A0A075B6I0 122 aa11.34□□□□□ -0.59
TPM1-232ENST00000561425 PPDPFLQ8WWR9 84 aa11.33□□□□□ -0.6
TPM1-232ENST00000561425 KRTAP4-1Q9BYQ7 146 aa11.33□□□□□ -0.6
TPM1-232ENST00000561425 ORMDL1Q9P0S3 153 aa11.33□□□□□ -0.6
TPM1-232ENST00000561425 SPCS1Q9Y6A9 102 aa11.33□□□□□ -0.6
TPM1-232ENST00000561425 H3BQ85 93 aa11.31□□□□□ -0.6
TPM1-232ENST00000561425 C1orf195Q5TG92 126 aa11.31□□□□□ -0.6
TPM1-232ENST00000561425 F8WEM9 126 aa11.27□□□□□ -0.61
TPM1-232ENST00000561425 Q6JHZ5 121 aa11.27□□□□□ -0.61
TPM1-232ENST00000561425 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
TPM1-232ENST00000561425 C9JAW5 83 aa11.25□□□□□ -0.61
TPM1-232ENST00000561425 H3BMG7 143 aa11.25□□□□□ -0.61
TPM1-232ENST00000561425 K7EP34 96 aa11.25□□□□□ -0.61
TPM1-232ENST00000561425 IGFL1Q6UW32 110 aa11.24□□□□□ -0.61
TPM1-232ENST00000561425 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
TPM1-232ENST00000561425 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
TPM1-232ENST00000561425 C9orf92A6NGG3 77 aa11.21□□□□□ -0.61
TPM1-232ENST00000561425 NDUFV3P56181 108 aaKnown RBP11.21□□□□□ -0.61
TPM1-232ENST00000561425 TRBV7-7A0A0K0K1E9 115 aa11.2□□□□□ -0.62
TPM1-232ENST00000561425 UBE2V1Q13404 147 aa11.2□□□□□ -0.62
TPM1-232ENST00000561425 MTURNQ8N3F0 131 aa11.18□□□□□ -0.62
TPM1-232ENST00000561425 H3BT86 120 aa11.17□□□□□ -0.62
TPM1-232ENST00000561425 ANKRD29Q8N6D5 301 aa11.16□□□□□ -0.62
TPM1-232ENST00000561425 PCOTHQ58A44 107 aa11.14□□□□□ -0.63
TPM1-232ENST00000561425 A0A1B0GV72 72 aa11.13□□□□□ -0.63
TPM1-232ENST00000561425 A0A1B0GV90 55 aa11.12□□□□□ -0.63
TPM1-232ENST00000561425 Q6Q795 121 aa11.12□□□□□ -0.63
TPM1-232ENST00000561425 JMJD7-PLA2G4BH0Y9G9 81 aa11.08□□□□□ -0.64
TPM1-232ENST00000561425 RPL37P61927 97 aaKnown RBP11.08□□□□□ -0.64
TPM1-232ENST00000561425 PRO0461Q9UI25 63 aa11.08□□□□□ -0.64
TPM1-232ENST00000561425 RBM3P98179 157 aaKnown RBP11.07□□□□□ -0.64
TPM1-232ENST00000561425 KRTAP19-2Q3LHN2 52 aa11.07□□□□□ -0.64
TPM1-232ENST00000561425 LCE2CQ5TA81 110 aa11.07□□□□□ -0.64
TPM1-232ENST00000561425 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
TPM1-232ENST00000561425 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
TPM1-232ENST00000561425 F8W1H4 67 aa11.04□□□□□ -0.64
TPM1-232ENST00000561425 TEN1Q86WV5 123 aa11.04□□□□□ -0.64
TPM1-232ENST00000561425 TRBV7-4A0A0J9YYF1 115 aa11□□□□□ -0.65
TPM1-232ENST00000561425 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
TPM1-232ENST00000561425 SS18L2Q9UHA2 77 aa10.99□□□□□ -0.65
TPM1-232ENST00000561425 KRTAP9-2Q9BYQ4 174 aa10.98□□□□□ -0.65
TPM1-232ENST00000561425 C14orf132Q9NPU4 83 aa10.98□□□□□ -0.65
TPM1-232ENST00000561425 CCKP06307 115 aa10.96□□□□□ -0.65
TPM1-232ENST00000561425 PDE6GP18545 87 aa10.96□□□□□ -0.65
TPM1-232ENST00000561425 VPS25Q9BRG1 176 aa10.96□□□□□ -0.65
TPM1-232ENST00000561425 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
TPM1-232ENST00000561425 A0A1W2PNM2 257 aa10.95□□□□□ -0.66
TPM1-232ENST00000561425 Q96NJ1 140 aa10.94□□□□□ -0.66
TPM1-232ENST00000561425 A0A087WSZ3 146 aa10.93□□□□□ -0.66
TPM1-232ENST00000561425 C21orf62-AS1Q17RA5 79 aa10.93□□□□□ -0.66
TPM1-232ENST00000561425 Q6ZQT0 140 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms