RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 KRTAP21-3Q3LHN1 58 aa4.19□□□□□ -1.74
AP4E1-203ENST00000560508 FRYLO94915 3013 aa4.19□□□□□ -1.74
AP4E1-203ENST00000560508 PRUNE2Q8WUY3 3088 aa4.18□□□□□ -1.74
AP4E1-203ENST00000560508 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
AP4E1-203ENST00000560508 Q6ZSA8 131 aa4.17□□□□□ -1.74
AP4E1-203ENST00000560508 Q5W150 140 aa4.17□□□□□ -1.74
AP4E1-203ENST00000560508 LCA10Q71F78 164 aa4.17□□□□□ -1.74
AP4E1-203ENST00000560508 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
AP4E1-203ENST00000560508 LINC01558Q9Y6Z2 57 aa4.17□□□□□ -1.74
AP4E1-203ENST00000560508 Q5XG85 94 aa4.16□□□□□ -1.74
AP4E1-203ENST00000560508 ACANP16112 2415 aa4.16□□□□□ -1.74
AP4E1-203ENST00000560508 MUC3AQ02505 3323 aa4.16□□□□□ -1.74
AP4E1-203ENST00000560508 EPG5Q9HCE0 2579 aa4.16□□□□□ -1.74
AP4E1-203ENST00000560508 A0A0D9SG42 100 aa4.15□□□□□ -1.75
AP4E1-203ENST00000560508 KRTAP10-1P60331 282 aa4.14□□□□□ -1.75
AP4E1-203ENST00000560508 S4R3F8 94 aa4.14□□□□□ -1.75
AP4E1-203ENST00000560508 FRYQ5TBA9 3013 aa4.14□□□□□ -1.75
AP4E1-203ENST00000560508 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
AP4E1-203ENST00000560508 KRTAP10-2P60368 255 aa4.13□□□□□ -1.75
AP4E1-203ENST00000560508 LCE6AA0A183 80 aa4.13□□□□□ -1.75
AP4E1-203ENST00000560508 A0A1B0GU33 70 aa4.13□□□□□ -1.75
AP4E1-203ENST00000560508 Q6ZR54 194 aa4.12□□□□□ -1.75
AP4E1-203ENST00000560508 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
AP4E1-203ENST00000560508 PRRC2CQ9Y520 2896 aaKnown RBP4.11□□□□□ -1.75
AP4E1-203ENST00000560508 DMDP11532 3685 aa4.1□□□□□ -1.75
AP4E1-203ENST00000560508 Q5VSD8 79 aa4.1□□□□□ -1.75
AP4E1-203ENST00000560508 PANO1I0J062 215 aa4.1□□□□□ -1.75
AP4E1-203ENST00000560508 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
AP4E1-203ENST00000560508 FLNAP21333 2647 aaKnown RBP4.1□□□□□ -1.75
AP4E1-203ENST00000560508 Q5VV11 94 aa4.1□□□□□ -1.75
AP4E1-203ENST00000560508 DMAC1Q96GE9 116 aa4.1□□□□□ -1.75
AP4E1-203ENST00000560508 FREM2Q5SZK8 3169 aa4.09□□□□□ -1.75
AP4E1-203ENST00000560508 H3BS24 57 aa4.09□□□□□ -1.75
AP4E1-203ENST00000560508 AKAP13Q12802 2813 aa4.09□□□□□ -1.75
AP4E1-203ENST00000560508 VPS13AQ96RL7 3174 aa4.09□□□□□ -1.75
AP4E1-203ENST00000560508 SPENQ96T58 3664 aaKnown RBP4.08□□□□□ -1.76
AP4E1-203ENST00000560508 NBEAQ8NFP9 2946 aa4.08□□□□□ -1.76
AP4E1-203ENST00000560508 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
AP4E1-203ENST00000560508 SETD2Q9BYW2 2564 aaPredicted RBP4.07□□□□□ -1.76
AP4E1-203ENST00000560508 SPINK7P58062 85 aa4.07□□□□□ -1.76
AP4E1-203ENST00000560508 ITPR3Q14573 2671 aa4.07□□□□□ -1.76
AP4E1-203ENST00000560508 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
AP4E1-203ENST00000560508 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
AP4E1-203ENST00000560508 CELSR3Q9NYQ7 3312 aa4.06□□□□□ -1.76
AP4E1-203ENST00000560508 WDFY4Q6ZS81 3184 aa4.06□□□□□ -1.76
AP4E1-203ENST00000560508 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
AP4E1-203ENST00000560508 FLNBO75369 2602 aaKnown RBP4.05□□□□□ -1.76
AP4E1-203ENST00000560508 MGAQ8IWI9 3026 aa4.05□□□□□ -1.76
AP4E1-203ENST00000560508 ZNF292O60281 2723 aa4.05□□□□□ -1.76
AP4E1-203ENST00000560508 OXTP01178 125 aa4.05□□□□□ -1.76
AP4E1-203ENST00000560508 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
AP4E1-203ENST00000560508 KRTAP11-1Q8IUC1 163 aa4.04□□□□□ -1.76
AP4E1-203ENST00000560508 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
AP4E1-203ENST00000560508 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
AP4E1-203ENST00000560508 A0A087X002 238 aa4.03□□□□□ -1.76
AP4E1-203ENST00000560508 TNRC18O15417 2968 aaPredicted RBP4.03□□□□□ -1.76
AP4E1-203ENST00000560508 COL6A3P12111 3177 aa4.02□□□□□ -1.77
AP4E1-203ENST00000560508 KMT2BQ9UMN6 2715 aaPredicted RBP4.01□□□□□ -1.77
AP4E1-203ENST00000560508 CFAP47Q6ZTR5 3102 aa4.01□□□□□ -1.77
AP4E1-203ENST00000560508 KRTAP13-1Q8IUC0 172 aa4.01□□□□□ -1.77
AP4E1-203ENST00000560508 H1FX-AS1Q4G0G2 97 aa4□□□□□ -1.77
AP4E1-203ENST00000560508 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
AP4E1-203ENST00000560508 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
AP4E1-203ENST00000560508 M0R2T5 61 aa3.99□□□□□ -1.77
AP4E1-203ENST00000560508 DSPP15924 2871 aaKnown RBP3.98□□□□□ -1.77
AP4E1-203ENST00000560508 ZFHX4Q86UP3 3567 aa3.98□□□□□ -1.77
AP4E1-203ENST00000560508 HECTD1Q9ULT8 2610 aa3.97□□□□□ -1.77
AP4E1-203ENST00000560508 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
AP4E1-203ENST00000560508 LOC400499M0QZD8 3231 aa3.96□□□□□ -1.78
AP4E1-203ENST00000560508 R4GN34 69 aa3.95□□□□□ -1.78
AP4E1-203ENST00000560508 ROMO1P60602 79 aa3.94□□□□□ -1.78
AP4E1-203ENST00000560508 RPL37P61927 97 aaKnown RBP3.94□□□□□ -1.78
AP4E1-203ENST00000560508 CFAP46Q8IYW2 2715 aa3.94□□□□□ -1.78
AP4E1-203ENST00000560508 HELZ2Q9BYK8 2649 aaKnown RBP3.94□□□□□ -1.78
AP4E1-203ENST00000560508 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
AP4E1-203ENST00000560508 USP24Q9UPU5 2620 aa3.94□□□□□ -1.78
AP4E1-203ENST00000560508 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
AP4E1-203ENST00000560508 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
AP4E1-203ENST00000560508 ASPMQ8IZT6 3477 aa3.9□□□□□ -1.78
AP4E1-203ENST00000560508 MGAM2Q2M2H8 2515 aa3.9□□□□□ -1.78
AP4E1-203ENST00000560508 LRBAP50851 2863 aa3.9□□□□□ -1.79
AP4E1-203ENST00000560508 M0QZ58 72 aa3.9□□□□□ -1.79
AP4E1-203ENST00000560508 KALRNO60229 2985 aa3.9□□□□□ -1.79
AP4E1-203ENST00000560508 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
AP4E1-203ENST00000560508 ATRQ13535 2644 aa3.9□□□□□ -1.79
AP4E1-203ENST00000560508 SMG1Q96Q15 3661 aaKnown RBP3.89□□□□□ -1.79
AP4E1-203ENST00000560508 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
AP4E1-203ENST00000560508 CHD6Q8TD26 2715 aa3.89□□□□□ -1.79
AP4E1-203ENST00000560508 BOD1L1Q8NFC6 3051 aa3.89□□□□□ -1.79
AP4E1-203ENST00000560508 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
AP4E1-203ENST00000560508 DCHS2Q6V1P9 2916 aa3.88□□□□□ -1.79
AP4E1-203ENST00000560508 DMXL1Q9Y485 3027 aa3.88□□□□□ -1.79
AP4E1-203ENST00000560508 IGSF10Q6WRI0 2623 aa3.88□□□□□ -1.79
AP4E1-203ENST00000560508 TEX15Q9BXT5 2789 aa3.87□□□□□ -1.79
AP4E1-203ENST00000560508 ZZEF1O43149 2961 aa3.84□□□□□ -1.79
AP4E1-203ENST00000560508 DCHS1Q96JQ0 3298 aa3.84□□□□□ -1.8
AP4E1-203ENST00000560508 A8MUU9 505 aa3.83□□□□□ -1.8
AP4E1-203ENST00000560508 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
AP4E1-203ENST00000560508 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
AP4E1-203ENST00000560508 BSNQ9UPA5 3926 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms