RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 LST1O00453 97 aa12.33□□□□□ -0.44
FOXA1-205ENST00000557418 KRTAP13-2Q52LG2 175 aa12.33□□□□□ -0.44
FOXA1-205ENST00000557418 Q8N377 158 aa12.32□□□□□ -0.44
FOXA1-205ENST00000557418 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
FOXA1-205ENST00000557418 DEFB105AQ8NG35 78 aa12.31□□□□□ -0.44
FOXA1-205ENST00000557418 A0A1W2PPM0 123 aa12.3□□□□□ -0.44
FOXA1-205ENST00000557418 SNCGO76070 127 aa12.3□□□□□ -0.44
FOXA1-205ENST00000557418 TCL1BO95988 128 aa12.3□□□□□ -0.44
FOXA1-205ENST00000557418 RNF213Q63HN8 5207 aa12.29□□□□□ -0.44
FOXA1-205ENST00000557418 TRACP01848 142 aa12.29□□□□□ -0.44
FOXA1-205ENST00000557418 SMIM29Q86T20 159 aa12.29□□□□□ -0.44
FOXA1-205ENST00000557418 LYRM7Q5U5X0 104 aa12.27□□□□□ -0.45
FOXA1-205ENST00000557418 C3orf22Q8N5N4 141 aa12.27□□□□□ -0.45
FOXA1-205ENST00000557418 LINC00304Q8N9R0 145 aa12.26□□□□□ -0.45
FOXA1-205ENST00000557418 ATXN8Q156A1 80 aa12.25□□□□□ -0.45
FOXA1-205ENST00000557418 OCIAD2Q56VL3 154 aa12.25□□□□□ -0.45
FOXA1-205ENST00000557418 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
FOXA1-205ENST00000557418 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
FOXA1-205ENST00000557418 DNAL4O96015 105 aa12.23□□□□□ -0.45
FOXA1-205ENST00000557418 FABP2P12104 132 aa12.23□□□□□ -0.45
FOXA1-205ENST00000557418 ORMDL1Q9P0S3 153 aa12.21□□□□□ -0.45
FOXA1-205ENST00000557418 LAMTOR3Q9UHA4 124 aa12.21□□□□□ -0.45
FOXA1-205ENST00000557418 IGLV9-49A0A0B4J1Y8 123 aa12.2□□□□□ -0.46
FOXA1-205ENST00000557418 MOBPQ13875 183 aa12.18□□□□□ -0.46
FOXA1-205ENST00000557418 GHRHP01286 108 aa12.16□□□□□ -0.46
FOXA1-205ENST00000557418 SPCS1Q9Y6A9 102 aa12.16□□□□□ -0.46
FOXA1-205ENST00000557418 H3BQ85 93 aa12.15□□□□□ -0.46
FOXA1-205ENST00000557418 SSBP3-AS1Q7Z2R9 100 aa12.15□□□□□ -0.46
FOXA1-205ENST00000557418 Q8NBF4 154 aa12.15□□□□□ -0.46
FOXA1-205ENST00000557418 C9orf153Q5TBE3 101 aa12.14□□□□□ -0.47
FOXA1-205ENST00000557418 SPAG11AQ6PDA7 123 aa12.14□□□□□ -0.47
FOXA1-205ENST00000557418 RETNLBQ9BQ08 111 aa12.14□□□□□ -0.47
FOXA1-205ENST00000557418 H3BMG7 143 aa12.13□□□□□ -0.47
FOXA1-205ENST00000557418 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
FOXA1-205ENST00000557418 IGLV8-61A0A075B6I0 122 aa12.12□□□□□ -0.47
FOXA1-205ENST00000557418 BAALC-AS2P0C853 105 aa12.12□□□□□ -0.47
FOXA1-205ENST00000557418 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
FOXA1-205ENST00000557418 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
FOXA1-205ENST00000557418 C9JAW5 83 aa12.1□□□□□ -0.47
FOXA1-205ENST00000557418 K7EP34 96 aa12.1□□□□□ -0.47
FOXA1-205ENST00000557418 UBE2V1Q13404 147 aa12.1□□□□□ -0.47
FOXA1-205ENST00000557418 F8WEM9 126 aa12.09□□□□□ -0.47
FOXA1-205ENST00000557418 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
FOXA1-205ENST00000557418 A0A0G2JQZ4 141 aa12.05□□□□□ -0.48
FOXA1-205ENST00000557418 Q6JHZ5 121 aa12.03□□□□□ -0.48
FOXA1-205ENST00000557418 IGFL1Q6UW32 110 aa12.03□□□□□ -0.48
FOXA1-205ENST00000557418 MTURNQ8N3F0 131 aa12.03□□□□□ -0.48
FOXA1-205ENST00000557418 ANKRD29Q8N6D5 301 aa12.03□□□□□ -0.48
FOXA1-205ENST00000557418 H3BT86 120 aa12.02□□□□□ -0.49
FOXA1-205ENST00000557418 PRO0461Q9UI25 63 aa12.02□□□□□ -0.49
FOXA1-205ENST00000557418 GTF2H5Q6ZYL4 71 aa12.01□□□□□ -0.49
FOXA1-205ENST00000557418 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
FOXA1-205ENST00000557418 CDIP1Q9H305 208 aa12□□□□□ -0.49
FOXA1-205ENST00000557418 SPINK1P00995 79 aa11.99□□□□□ -0.49
FOXA1-205ENST00000557418 A0A1B0GV72 72 aa11.98□□□□□ -0.49
FOXA1-205ENST00000557418 TPRXLQ17RH7 258 aa11.98□□□□□ -0.49
FOXA1-205ENST00000557418 CD164Q04900 197 aa11.97□□□□□ -0.49
FOXA1-205ENST00000557418 OBSCN-AS1Q96MR7 158 aa11.95□□□□□ -0.5
FOXA1-205ENST00000557418 A0A1B0GV90 55 aa11.94□□□□□ -0.5
FOXA1-205ENST00000557418 HRCT1Q6UXD1 115 aa11.94□□□□□ -0.5
FOXA1-205ENST00000557418 FP248Q71RG6 208 aaPredicted RBP11.94□□□□□ -0.5
FOXA1-205ENST00000557418 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
FOXA1-205ENST00000557418 RPS29P62273 56 aaKnown RBP11.93□□□□□ -0.5
FOXA1-205ENST00000557418 RBM3P98179 157 aaKnown RBP11.93□□□□□ -0.5
FOXA1-205ENST00000557418 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
FOXA1-205ENST00000557418 MUC2Q02817 5179 aa11.91□□□□□ -0.5
FOXA1-205ENST00000557418 A0A1W2PNM2 257 aa11.9□□□□□ -0.5
FOXA1-205ENST00000557418 Q6Q795 121 aa11.9□□□□□ -0.5
FOXA1-205ENST00000557418 TRBV7-7A0A0K0K1E9 115 aa11.87□□□□□ -0.51
FOXA1-205ENST00000557418 A0A0U1RQV1 116 aa11.87□□□□□ -0.51
FOXA1-205ENST00000557418 F8W1H4 67 aa11.87□□□□□ -0.51
FOXA1-205ENST00000557418 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
FOXA1-205ENST00000557418 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
FOXA1-205ENST00000557418 Q5XG85 94 aa11.86□□□□□ -0.51
FOXA1-205ENST00000557418 LOC110117498A0A087WWA1 95 aa11.85□□□□□ -0.51
FOXA1-205ENST00000557418 C14orf132Q9NPU4 83 aa11.85□□□□□ -0.51
FOXA1-205ENST00000557418 Q6ZQT0 140 aa11.84□□□□□ -0.51
FOXA1-205ENST00000557418 MUC17Q685J3 4493 aa11.83□□□□□ -0.52
FOXA1-205ENST00000557418 CCKP06307 115 aa11.83□□□□□ -0.52
FOXA1-205ENST00000557418 LIMD2Q9BT23 127 aa11.83□□□□□ -0.52
FOXA1-205ENST00000557418 KRTAP13-3Q3SY46 172 aa11.81□□□□□ -0.52
FOXA1-205ENST00000557418 PDE6GP18545 87 aa11.79□□□□□ -0.52
FOXA1-205ENST00000557418 A0A087WSZ3 146 aa11.77□□□□□ -0.53
FOXA1-205ENST00000557418 ASB16-AS1Q495Z4 193 aa11.76□□□□□ -0.53
FOXA1-205ENST00000557418 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
FOXA1-205ENST00000557418 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
FOXA1-205ENST00000557418 C1orf195Q5TG92 126 aa11.73□□□□□ -0.53
FOXA1-205ENST00000557418 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.53
FOXA1-205ENST00000557418 SS18L2Q9UHA2 77 aa11.71□□□□□ -0.53
FOXA1-205ENST00000557418 A0A1B0GW54 56 aa11.69□□□□□ -0.54
FOXA1-205ENST00000557418 SEC61BP60468 96 aaKnown RBP11.66□□□□□ -0.54
FOXA1-205ENST00000557418 Q96NJ1 140 aa11.66□□□□□ -0.54
FOXA1-205ENST00000557418 FAT4Q6V0I7 4981 aa11.62□□□□□ -0.55
FOXA1-205ENST00000557418 LINC00472Q9H8W2 130 aa11.62□□□□□ -0.55
FOXA1-205ENST00000557418 XP32Q5T750 250 aa11.58□□□□□ -0.56
FOXA1-205ENST00000557418 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
FOXA1-205ENST00000557418 DEFB116Q30KQ4 102 aa11.53□□□□□ -0.56
FOXA1-205ENST00000557418 C9orf92A6NGG3 77 aa11.51□□□□□ -0.57
FOXA1-205ENST00000557418 NREPQ16612 68 aa11.51□□□□□ -0.57
FOXA1-205ENST00000557418 KRTAP4-1Q9BYQ7 146 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms