RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
SLIRP-209ENST00000557342 H3BUT2 72 aa7.15□□□□□ -1.26
SLIRP-209ENST00000557342 TRIAP1O43715 76 aa7.15□□□□□ -1.26
SLIRP-209ENST00000557342 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
SLIRP-209ENST00000557342 PSMB2P49721 201 aa7.14□□□□□ -1.27
SLIRP-209ENST00000557342 LYRM7Q5U5X0 104 aa7.14□□□□□ -1.27
SLIRP-209ENST00000557342 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
SLIRP-209ENST00000557342 NAA38Q9BRA0 125 aaKnown RBP7.14□□□□□ -1.27
SLIRP-209ENST00000557342 hADV29S1A0JD25 119 aa7.13□□□□□ -1.27
SLIRP-209ENST00000557342 COX6CP09669 75 aa7.13□□□□□ -1.27
SLIRP-209ENST00000557342 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-209ENST00000557342 FP248Q71RG6 208 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-209ENST00000557342 LRP2P98164 4655 aa7.13□□□□□ -1.27
SLIRP-209ENST00000557342 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
SLIRP-209ENST00000557342 FABP2P12104 132 aa7.11□□□□□ -1.27
SLIRP-209ENST00000557342 LPAP08519 4548 aa7.1□□□□□ -1.27
SLIRP-209ENST00000557342 H0YGX0 51 aa7.1□□□□□ -1.27
SLIRP-209ENST00000557342 SNCGO76070 127 aa7.1□□□□□ -1.27
SLIRP-209ENST00000557342 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
SLIRP-209ENST00000557342 Q8N377 158 aa7.1□□□□□ -1.27
SLIRP-209ENST00000557342 SCGB1C2P0DMR2 95 aa7.09□□□□□ -1.27
SLIRP-209ENST00000557342 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
SLIRP-209ENST00000557342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-209ENST00000557342 Q6ZQY7 126 aa7.09□□□□□ -1.27
SLIRP-209ENST00000557342 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
SLIRP-209ENST00000557342 TRBV20-1A0A075B6N2 111 aa7.08□□□□□ -1.28
SLIRP-209ENST00000557342 CD164Q04900 197 aa7.08□□□□□ -1.28
SLIRP-209ENST00000557342 F8WEM9 126 aa7.07□□□□□ -1.28
SLIRP-209ENST00000557342 PPDPFLQ8WWR9 84 aa7.07□□□□□ -1.28
SLIRP-209ENST00000557342 SPCS1Q9Y6A9 102 aa7.07□□□□□ -1.28
SLIRP-209ENST00000557342 A0A1B0GV90 55 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 A0A1B0GX51 115 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 K7EP34 96 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 LST1O00453 97 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 TCL1BO95988 128 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 CLEC2BQ92478 149 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
SLIRP-209ENST00000557342 ATXN8Q156A1 80 aa7.05□□□□□ -1.28
SLIRP-209ENST00000557342 FAM218AQ96MZ4 157 aa7.05□□□□□ -1.28
SLIRP-209ENST00000557342 TRACP01848 142 aa7.04□□□□□ -1.28
SLIRP-209ENST00000557342 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
SLIRP-209ENST00000557342 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
SLIRP-209ENST00000557342 GHRHP01286 108 aa7.02□□□□□ -1.29
SLIRP-209ENST00000557342 Q6JHZ5 121 aa7.02□□□□□ -1.29
SLIRP-209ENST00000557342 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
SLIRP-209ENST00000557342 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
SLIRP-209ENST00000557342 H3BMG7 143 aa7□□□□□ -1.29
SLIRP-209ENST00000557342 DNAL4O96015 105 aa7□□□□□ -1.29
SLIRP-209ENST00000557342 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
SLIRP-209ENST00000557342 Q5XG85 94 aa7□□□□□ -1.29
SLIRP-209ENST00000557342 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
SLIRP-209ENST00000557342 A0A0G2JQZ4 141 aa6.97□□□□□ -1.29
SLIRP-209ENST00000557342 C9JAW5 83 aa6.96□□□□□ -1.3
SLIRP-209ENST00000557342 H3BQ85 93 aa6.96□□□□□ -1.3
SLIRP-209ENST00000557342 IGFL1Q6UW32 110 aa6.96□□□□□ -1.3
SLIRP-209ENST00000557342 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
SLIRP-209ENST00000557342 PRO0461Q9UI25 63 aa6.96□□□□□ -1.3
SLIRP-209ENST00000557342 H3BT86 120 aa6.95□□□□□ -1.3
SLIRP-209ENST00000557342 NDUFV3P56181 108 aaKnown RBP6.94□□□□□ -1.3
SLIRP-209ENST00000557342 TRBV7-7A0A0K0K1E9 115 aa6.93□□□□□ -1.3
SLIRP-209ENST00000557342 F8W1H4 67 aa6.93□□□□□ -1.3
SLIRP-209ENST00000557342 LCE2BO14633 110 aa6.93□□□□□ -1.3
SLIRP-209ENST00000557342 BAALC-AS2P0C853 105 aa6.92□□□□□ -1.3
SLIRP-209ENST00000557342 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
SLIRP-209ENST00000557342 MTURNQ8N3F0 131 aa6.92□□□□□ -1.3
SLIRP-209ENST00000557342 TMEM256-PLSCR3K7ERE1 68 aa6.91□□□□□ -1.3
SLIRP-209ENST00000557342 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-209ENST00000557342 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
SLIRP-209ENST00000557342 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
SLIRP-209ENST00000557342 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
SLIRP-209ENST00000557342 Q6Q795 121 aa6.89□□□□□ -1.31
SLIRP-209ENST00000557342 A0A0U1RQV1 116 aa6.88□□□□□ -1.31
SLIRP-209ENST00000557342 XP32Q5T750 250 aa6.88□□□□□ -1.31
SLIRP-209ENST00000557342 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
SLIRP-209ENST00000557342 SS18L2Q9UHA2 77 aa6.87□□□□□ -1.31
SLIRP-209ENST00000557342 C9orf92A6NGG3 77 aa6.86□□□□□ -1.31
SLIRP-209ENST00000557342 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
SLIRP-209ENST00000557342 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
SLIRP-209ENST00000557342 JMJD7-PLA2G4BH0Y9G9 81 aa6.83□□□□□ -1.32
SLIRP-209ENST00000557342 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
SLIRP-209ENST00000557342 A0A087WSZ3 146 aa6.81□□□□□ -1.32
SLIRP-209ENST00000557342 TRBV7-4A0A0J9YYF1 115 aa6.79□□□□□ -1.32
SLIRP-209ENST00000557342 A0A1B0GV72 72 aa6.79□□□□□ -1.32
SLIRP-209ENST00000557342 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
SLIRP-209ENST00000557342 RBM3P98179 157 aaKnown RBP6.79□□□□□ -1.32
SLIRP-209ENST00000557342 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
SLIRP-209ENST00000557342 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
SLIRP-209ENST00000557342 DSCR8Q96T75 97 aa6.77□□□□□ -1.33
SLIRP-209ENST00000557342 CCKP06307 115 aa6.76□□□□□ -1.33
SLIRP-209ENST00000557342 PDE6GP18545 87 aa6.76□□□□□ -1.33
SLIRP-209ENST00000557342 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
SLIRP-209ENST00000557342 MUC2Q02817 5179 aa6.74□□□□□ -1.33
SLIRP-209ENST00000557342 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
SLIRP-209ENST00000557342 PCOTHQ58A44 107 aa6.74□□□□□ -1.33
SLIRP-209ENST00000557342 Q6ZQT0 140 aa6.74□□□□□ -1.33
SLIRP-209ENST00000557342 Q96NJ1 140 aa6.73□□□□□ -1.33
SLIRP-209ENST00000557342 KRTAP9-2Q9BYQ4 174 aa6.73□□□□□ -1.33
SLIRP-209ENST00000557342 VPS25Q9BRG1 176 aa6.72□□□□□ -1.33
SLIRP-209ENST00000557342 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms