RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 OTOGQ6ZRI0 2925 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 CMC2Q9NRP2 79 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 SPTA1P02549 2419 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 LYSTQ99698 3801 aa0.55□□□□□ -2.32
SLC38A6-220ENST00000556938 PDE4DIPQ5VU43 2346 aa0.54□□□□□ -2.32
SLC38A6-220ENST00000556938 ABCA5Q8WWZ7 1642 aa0.54□□□□□ -2.32
SLC38A6-220ENST00000556938 PLNP26678 52 aa0.54□□□□□ -2.32
SLC38A6-220ENST00000556938 DEFB109BQ30KR1 87 aa0.54□□□□□ -2.32
SLC38A6-220ENST00000556938 SMR3AQ99954 134 aa0.54□□□□□ -2.32
SLC38A6-220ENST00000556938 HUWE1Q7Z6Z7 4374 aaKnown RBP0.54□□□□□ -2.32
SLC38A6-220ENST00000556938 ABCC8Q09428 1581 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 NRXN3Q9Y4C0 1643 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 ABCA2Q9BZC7 2435 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 H0YGX0 51 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 DEFB130BP0DP73 79 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 DEFB130AP0DP74 79 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 PRRC2CQ9Y520 2896 aaKnown RBP0.53□□□□□ -2.32
SLC38A6-220ENST00000556938 KIAA0586Q9BVV6 1533 aa0.53□□□□□ -2.33
SLC38A6-220ENST00000556938 KMT2AQ03164 3969 aa0.53□□□□□ -2.33
SLC38A6-220ENST00000556938 NCOR1O75376 2440 aa0.52□□□□□ -2.33
SLC38A6-220ENST00000556938 IAPPP10997 89 aa0.52□□□□□ -2.33
SLC38A6-220ENST00000556938 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
SLC38A6-220ENST00000556938 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
SLC38A6-220ENST00000556938 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 LINC01546A6NGU7 62 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 PRH1P02810 166 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 MINOS1Q5TGZ0 78 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 AKAP13Q12802 2813 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
SLC38A6-220ENST00000556938 IGF2RP11717 2491 aa0.5□□□□□ -2.33
SLC38A6-220ENST00000556938 SMIM27A0A1W2PRY6 76 aa0.5□□□□□ -2.33
SLC38A6-220ENST00000556938 TNXBP22105 4242 aa0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 RPS27P42677 84 aaKnown RBP0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 RPS27LQ71UM5 84 aaKnown RBP0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 LINC00308Q8TCZ7 52 aa0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 TMEM167BQ9NRX6 74 aa0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 ABRACLQ9P1F3 81 aa0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
SLC38A6-220ENST00000556938 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
SLC38A6-220ENST00000556938 HECTD1Q9ULT8 2610 aa0.48□□□□□ -2.33
SLC38A6-220ENST00000556938 CDC42BPAQ5VT25 1732 aa0.48□□□□□ -2.33
SLC38A6-220ENST00000556938 TOMM5Q8N4H5 51 aa0.48□□□□□ -2.33
SLC38A6-220ENST00000556938 C6orf48Q9UBA6 75 aa0.48□□□□□ -2.33
SLC38A6-220ENST00000556938 PCNX1Q96RV3 2341 aa0.48□□□□□ -2.33
SLC38A6-220ENST00000556938 CELSR1Q9NYQ6 3014 aa0.47□□□□□ -2.33
SLC38A6-220ENST00000556938 SPINK1P00995 79 aa0.47□□□□□ -2.33
SLC38A6-220ENST00000556938 IQGAP2Q13576 1575 aa0.47□□□□□ -2.33
SLC38A6-220ENST00000556938 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
SLC38A6-220ENST00000556938 WT1-ASQ06250 92 aa0.46□□□□□ -2.34
SLC38A6-220ENST00000556938 TNRC18O15417 2968 aaPredicted RBP0.45□□□□□ -2.34
SLC38A6-220ENST00000556938 U3KQA8 63 aa0.45□□□□□ -2.34
SLC38A6-220ENST00000556938 SETXQ7Z333 2677 aaKnown RBP0.44□□□□□ -2.34
SLC38A6-220ENST00000556938 TOP2AP11388 1531 aaKnown RBP0.44□□□□□ -2.34
SLC38A6-220ENST00000556938 PTPN13Q12923 2485 aa0.44□□□□□ -2.34
SLC38A6-220ENST00000556938 IQGAP1P46940 1657 aa0.44□□□□□ -2.34
SLC38A6-220ENST00000556938 LMO7Q8WWI1 1683 aa0.44□□□□□ -2.34
SLC38A6-220ENST00000556938 S4R3F8 94 aa0.44□□□□□ -2.34
SLC38A6-220ENST00000556938 LPAP08519 4548 aa0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 USP24Q9UPU5 2620 aa0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 EP300Q09472 2414 aaPredicted RBP0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 DDX60Q8IY21 1712 aaKnown RBP0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 CEP290O15078 2479 aa0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 UBR5O95071 2799 aaPredicted RBP0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 CREBBPQ92793 2442 aa0.43□□□□□ -2.34
SLC38A6-220ENST00000556938 A0A0C4DFX4 3053 aa0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 MYCBP2O75592 4640 aa0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 TIMM8BQ9Y5J9 83 aaPredicted RBP0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 FAM208AQ9UK61 1670 aaKnown RBP0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 PKD1L2Q7Z442 2459 aa0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
SLC38A6-220ENST00000556938 SRRM2Q9UQ35 2752 aaKnown RBP0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 M0R2T5 61 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 PRM1P04553 51 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 PRLHP81277 87 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 TFF3Q07654 80 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 WNK1Q9H4A3 2382 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 HECTD4Q9Y4D8 3996 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 PKD1P98161 4303 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 NF1P21359 2839 aa0.41□□□□□ -2.34
SLC38A6-220ENST00000556938 NBASA2RRP1 2371 aa0.4□□□□□ -2.34
SLC38A6-220ENST00000556938 PDZD2O15018 2839 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 NFAT5O94916 1531 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 H3BUA1 57 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 DEFB135Q30KP9 77 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 SMIM2Q9BVW6 85 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 DNAH3Q8TD57 4116 aa0.4□□□□□ -2.35
SLC38A6-220ENST00000556938 KIF21BO75037 1637 aa0.39□□□□□ -2.35
SLC38A6-220ENST00000556938 ZZEF1O43149 2961 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms