RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
SLC38A6-220ENST00000556938 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
SLC38A6-220ENST00000556938 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
SLC38A6-220ENST00000556938 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
SLC38A6-220ENST00000556938 FOXD1Q16676 465 aa22.16■■□□□ 1.14
SLC38A6-220ENST00000556938 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
SLC38A6-220ENST00000556938 MSH5O43196 834 aa20.79■□□□□ 0.92
SLC38A6-220ENST00000556938 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
SLC38A6-220ENST00000556938 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
SLC38A6-220ENST00000556938 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
SLC38A6-220ENST00000556938 ADRA2BP18089 450 aa20.36■□□□□ 0.85
SLC38A6-220ENST00000556938 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
SLC38A6-220ENST00000556938 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
SLC38A6-220ENST00000556938 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
SLC38A6-220ENST00000556938 CACNB1Q02641 598 aaPredicted RBP18.11■□□□□ 0.49
SLC38A6-220ENST00000556938 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
SLC38A6-220ENST00000556938 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
SLC38A6-220ENST00000556938 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
SLC38A6-220ENST00000556938 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
SLC38A6-220ENST00000556938 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
SLC38A6-220ENST00000556938 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
SLC38A6-220ENST00000556938 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
SLC38A6-220ENST00000556938 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
SLC38A6-220ENST00000556938 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
SLC38A6-220ENST00000556938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
SLC38A6-220ENST00000556938 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
SLC38A6-220ENST00000556938 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
SLC38A6-220ENST00000556938 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
SLC38A6-220ENST00000556938 CAPN15O75808 1086 aa16.51■□□□□ 0.23
SLC38A6-220ENST00000556938 DSG3P32926 999 aa16.51■□□□□ 0.23
SLC38A6-220ENST00000556938 KCNA4P22459 653 aa16.41■□□□□ 0.22
SLC38A6-220ENST00000556938 POTEHQ6S545 545 aa16.37■□□□□ 0.21
SLC38A6-220ENST00000556938 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
SLC38A6-220ENST00000556938 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
SLC38A6-220ENST00000556938 ABCB7O75027 752 aa16.14■□□□□ 0.17
SLC38A6-220ENST00000556938 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
SLC38A6-220ENST00000556938 APLP2Q06481 763 aa16.03■□□□□ 0.16
SLC38A6-220ENST00000556938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
SLC38A6-220ENST00000556938 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
SLC38A6-220ENST00000556938 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
SLC38A6-220ENST00000556938 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
SLC38A6-220ENST00000556938 POLA2Q14181 598 aa15.65■□□□□ 0.1
SLC38A6-220ENST00000556938 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
SLC38A6-220ENST00000556938 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
SLC38A6-220ENST00000556938 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
SLC38A6-220ENST00000556938 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
SLC38A6-220ENST00000556938 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
SLC38A6-220ENST00000556938 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
SLC38A6-220ENST00000556938 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
SLC38A6-220ENST00000556938 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
SLC38A6-220ENST00000556938 REM2Q8IYK8 340 aaPredicted RBP15.17■□□□□ 0.02
SLC38A6-220ENST00000556938 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
SLC38A6-220ENST00000556938 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
SLC38A6-220ENST00000556938 ZBTB22O15209 634 aa15.11■□□□□ 0.01
SLC38A6-220ENST00000556938 PITPNM1O00562 1244 aa15.03■□□□□ -0
SLC38A6-220ENST00000556938 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
SLC38A6-220ENST00000556938 HAX1O00165 279 aa14.94□□□□□ -0.02
SLC38A6-220ENST00000556938 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
SLC38A6-220ENST00000556938 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
SLC38A6-220ENST00000556938 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
SLC38A6-220ENST00000556938 EVX2Q03828 476 aa14.8□□□□□ -0.04
SLC38A6-220ENST00000556938 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
SLC38A6-220ENST00000556938 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
SLC38A6-220ENST00000556938 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
SLC38A6-220ENST00000556938 FBLN2P98095 1184 aa14.71□□□□□ -0.05
SLC38A6-220ENST00000556938 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
SLC38A6-220ENST00000556938 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
SLC38A6-220ENST00000556938 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
SLC38A6-220ENST00000556938 SPDYE1Q8NFV5 336 aaPredicted RBP14.58□□□□□ -0.08
SLC38A6-220ENST00000556938 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
SLC38A6-220ENST00000556938 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
SLC38A6-220ENST00000556938 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
SLC38A6-220ENST00000556938 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
SLC38A6-220ENST00000556938 GABBR2O75899 941 aa14.38□□□□□ -0.11
SLC38A6-220ENST00000556938 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
SLC38A6-220ENST00000556938 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
SLC38A6-220ENST00000556938 LHX8Q68G74 356 aa14.22□□□□□ -0.13
SLC38A6-220ENST00000556938 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
SLC38A6-220ENST00000556938 POTEIP0CG38 1075 aa14.12□□□□□ -0.15
SLC38A6-220ENST00000556938 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
SLC38A6-220ENST00000556938 CLCN6P51797 869 aa13.9□□□□□ -0.18
SLC38A6-220ENST00000556938 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
SLC38A6-220ENST00000556938 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
SLC38A6-220ENST00000556938 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
SLC38A6-220ENST00000556938 DCBLD2Q96PD2 775 aa13.88□□□□□ -0.19
SLC38A6-220ENST00000556938 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
SLC38A6-220ENST00000556938 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
SLC38A6-220ENST00000556938 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
SLC38A6-220ENST00000556938 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
SLC38A6-220ENST00000556938 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
SLC38A6-220ENST00000556938 OTUD5Q96G74 571 aa13.64□□□□□ -0.23
SLC38A6-220ENST00000556938 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
SLC38A6-220ENST00000556938 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
SLC38A6-220ENST00000556938 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
SLC38A6-220ENST00000556938 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
SLC38A6-220ENST00000556938 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
SLC38A6-220ENST00000556938 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
SLC38A6-220ENST00000556938 ASTLQ6HA08 431 aaPredicted RBP13.43□□□□□ -0.26
SLC38A6-220ENST00000556938 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SLC38A6-220ENST00000556938 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms