RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PCNTO95613 3336 aa1.18□□□□□ -2.22
MTHFD1-212ENST00000555858 ASCC3Q8N3C0 2202 aaKnown RBP1.18□□□□□ -2.22
MTHFD1-212ENST00000555858 CEP350Q5VT06 3117 aa1.18□□□□□ -2.22
MTHFD1-212ENST00000555858 WNK2Q9Y3S1 2297 aa1.17□□□□□ -2.22
MTHFD1-212ENST00000555858 NAV3Q8IVL0 2385 aa1.17□□□□□ -2.22
MTHFD1-212ENST00000555858 STATHP02808 62 aa1.17□□□□□ -2.22
MTHFD1-212ENST00000555858 DEFB119Q8N690 84 aa1.17□□□□□ -2.22
MTHFD1-212ENST00000555858 NOP10Q9NPE3 64 aaKnown RBP1.17□□□□□ -2.22
MTHFD1-212ENST00000555858 PRO0255Q9UI72 69 aa1.17□□□□□ -2.22
MTHFD1-212ENST00000555858 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
MTHFD1-212ENST00000555858 H3BUX3 64 aa1.16□□□□□ -2.22
MTHFD1-212ENST00000555858 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
MTHFD1-212ENST00000555858 DEFB105AQ8NG35 78 aa1.16□□□□□ -2.22
MTHFD1-212ENST00000555858 PRLHP81277 87 aa1.15□□□□□ -2.23
MTHFD1-212ENST00000555858 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.23
MTHFD1-212ENST00000555858 APLNQ9ULZ1 77 aa1.15□□□□□ -2.23
MTHFD1-212ENST00000555858 S4R3F8 94 aa1.15□□□□□ -2.23
MTHFD1-212ENST00000555858 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.23
MTHFD1-212ENST00000555858 PIEZO2Q9H5I5 2752 aa1.14□□□□□ -2.23
MTHFD1-212ENST00000555858 COL6A6A6NMZ7 2263 aa1.14□□□□□ -2.23
MTHFD1-212ENST00000555858 HTTP42858 3142 aa1.14□□□□□ -2.23
MTHFD1-212ENST00000555858 IGF2RP11717 2491 aa1.13□□□□□ -2.23
MTHFD1-212ENST00000555858 BRCA2P51587 3418 aa1.13□□□□□ -2.23
MTHFD1-212ENST00000555858 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
MTHFD1-212ENST00000555858 CENPFP49454 3210 aa1.13□□□□□ -2.23
MTHFD1-212ENST00000555858 OTOGLQ3ZCN5 2332 aa1.12□□□□□ -2.23
MTHFD1-212ENST00000555858 PCNX1Q96RV3 2341 aa1.12□□□□□ -2.23
MTHFD1-212ENST00000555858 TNRC18O15417 2968 aaPredicted RBP1.12□□□□□ -2.23
MTHFD1-212ENST00000555858 APELAP0DMC3 54 aa1.12□□□□□ -2.23
MTHFD1-212ENST00000555858 LAMA2P24043 3122 aaKnown RBP1.12□□□□□ -2.23
MTHFD1-212ENST00000555858 KRTAP21-3Q3LHN1 58 aa1.11□□□□□ -2.23
MTHFD1-212ENST00000555858 RHPN1-AS1Q9BWJ2 59 aa1.11□□□□□ -2.23
MTHFD1-212ENST00000555858 MKI67P46013 3256 aaKnown RBP1.1□□□□□ -2.23
MTHFD1-212ENST00000555858 REV3LO60673 3130 aa1.1□□□□□ -2.23
MTHFD1-212ENST00000555858 DNAH12Q6ZR08 3092 aa1.1□□□□□ -2.23
MTHFD1-212ENST00000555858 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
MTHFD1-212ENST00000555858 PTPRZ1P23471 2315 aaPredicted RBP1.09□□□□□ -2.23
MTHFD1-212ENST00000555858 RANBP2P49792 3224 aaKnown RBP1.09□□□□□ -2.23
MTHFD1-212ENST00000555858 SPINK1P00995 79 aa1.09□□□□□ -2.23
MTHFD1-212ENST00000555858 FBN1P35555 2871 aaKnown RBP1.09□□□□□ -2.24
MTHFD1-212ENST00000555858 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.24
MTHFD1-212ENST00000555858 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 WDR87Q6ZQQ6 2873 aa1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 SZT2Q5T011 3432 aa1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 PRUNE2Q8WUY3 3088 aa1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 LAMA3Q16787 3333 aa1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 TRANK1O15050 2925 aa1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 EYSQ5T1H1 3165 aa1.08□□□□□ -2.24
MTHFD1-212ENST00000555858 A0A0C4DFX4 3053 aa1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 SPTBN1Q01082 2364 aaKnown RBP1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 CEP290O15078 2479 aa1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 M0QZ58 72 aa1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 DEFB1P60022 68 aa1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 DEFB110Q30KQ9 67 aa1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 CDH23Q9H251 3354 aa1.07□□□□□ -2.24
MTHFD1-212ENST00000555858 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
MTHFD1-212ENST00000555858 AKAP6Q13023 2319 aa1.06□□□□□ -2.24
MTHFD1-212ENST00000555858 MUC3AQ02505 3323 aa1.06□□□□□ -2.24
MTHFD1-212ENST00000555858 TRIOO75962 3097 aa1.06□□□□□ -2.24
MTHFD1-212ENST00000555858 RP1L1Q8IWN7 2480 aaPredicted RBP1.06□□□□□ -2.24
MTHFD1-212ENST00000555858 CHD9Q3L8U1 2897 aa1.06□□□□□ -2.24
MTHFD1-212ENST00000555858 CHD7Q9P2D1 2997 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 CACNA1HO95180 2353 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 COL6A3P12111 3177 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 UNC80Q8N2C7 3258 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 VCANP13611 3396 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 ROS1P08922 2347 aa1.05□□□□□ -2.24
MTHFD1-212ENST00000555858 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
MTHFD1-212ENST00000555858 DMDP11532 3685 aa1.04□□□□□ -2.24
MTHFD1-212ENST00000555858 A0A0D9SG42 100 aa1.04□□□□□ -2.24
MTHFD1-212ENST00000555858 Q9Y3F1 56 aa1.04□□□□□ -2.24
MTHFD1-212ENST00000555858 MUC6Q6W4X9 2439 aa1.04□□□□□ -2.24
MTHFD1-212ENST00000555858 C5orf42Q9H799 3197 aa1.03□□□□□ -2.24
MTHFD1-212ENST00000555858 NCOR1O75376 2440 aa1.03□□□□□ -2.24
MTHFD1-212ENST00000555858 SPTA1P02549 2419 aa1.03□□□□□ -2.24
MTHFD1-212ENST00000555858 HTN1P15515 57 aa1.03□□□□□ -2.24
MTHFD1-212ENST00000555858 DEFB108BQ8NET1 73 aa1.03□□□□□ -2.24
MTHFD1-212ENST00000555858 BDP1A6H8Y1 2624 aa1.03□□□□□ -2.24
MTHFD1-212ENST00000555858 ACACAQ13085 2346 aa1.03□□□□□ -2.25
MTHFD1-212ENST00000555858 CSPG4Q6UVK1 2322 aa1.03□□□□□ -2.25
MTHFD1-212ENST00000555858 SPTBN2O15020 2390 aa1.02□□□□□ -2.25
MTHFD1-212ENST00000555858 FRYLO94915 3013 aa1.02□□□□□ -2.25
MTHFD1-212ENST00000555858 F8P00451 2351 aa1.02□□□□□ -2.25
MTHFD1-212ENST00000555858 VPS13AQ96RL7 3174 aa1.02□□□□□ -2.25
MTHFD1-212ENST00000555858 XIRP2A4UGR9 3374 aa1.02□□□□□ -2.25
MTHFD1-212ENST00000555858 ABCA2Q9BZC7 2435 aa1.01□□□□□ -2.25
MTHFD1-212ENST00000555858 KRTAP5-7Q6L8G8 165 aa1.01□□□□□ -2.25
MTHFD1-212ENST00000555858 DEFB124Q8NES8 71 aa1.01□□□□□ -2.25
MTHFD1-212ENST00000555858 MYO15AQ9UKN7 3530 aa1.01□□□□□ -2.25
MTHFD1-212ENST00000555858 WDFY4Q6ZS81 3184 aa1.01□□□□□ -2.25
MTHFD1-212ENST00000555858 DNAH14Q0VDD8 3507 aa1□□□□□ -2.25
MTHFD1-212ENST00000555858 TTC28Q96AY4 2481 aa1□□□□□ -2.25
MTHFD1-212ENST00000555858 C2CD3Q4AC94 2353 aa1□□□□□ -2.25
MTHFD1-212ENST00000555858 WDFY3Q8IZQ1 3526 aa1□□□□□ -2.25
MTHFD1-212ENST00000555858 DSPP15924 2871 aaKnown RBP1□□□□□ -2.25
MTHFD1-212ENST00000555858 LAMA1P25391 3075 aa1□□□□□ -2.25
MTHFD1-212ENST00000555858 USP34Q70CQ2 3546 aa0.99□□□□□ -2.25
MTHFD1-212ENST00000555858 DMXL1Q9Y485 3027 aa0.99□□□□□ -2.25
MTHFD1-212ENST00000555858 GVINP1Q7Z2Y8 2422 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms