RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 Q6ZQY7 126 aa13.05□□□□□ -0.32
CDKN3-208ENST00000555837 LRP2P98164 4655 aa13.04□□□□□ -0.32
CDKN3-208ENST00000555837 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
CDKN3-208ENST00000555837 Q8N377 158 aa13.04□□□□□ -0.32
CDKN3-208ENST00000555837 SMIM29Q86T20 159 aa13.02□□□□□ -0.33
CDKN3-208ENST00000555837 CDIP1Q9H305 208 aa13.02□□□□□ -0.33
CDKN3-208ENST00000555837 A0A1B0GX51 115 aa13.01□□□□□ -0.33
CDKN3-208ENST00000555837 FXYD2P54710 66 aa13□□□□□ -0.33
CDKN3-208ENST00000555837 COX6CP09669 75 aa12.98□□□□□ -0.33
CDKN3-208ENST00000555837 Q6JHZ5 121 aa12.98□□□□□ -0.33
CDKN3-208ENST00000555837 SNHG12Q9BXW3 62 aa12.98□□□□□ -0.33
CDKN3-208ENST00000555837 UBR4Q5T4S7 5183 aa12.97□□□□□ -0.33
CDKN3-208ENST00000555837 SMIM6P0DI80 62 aa12.95□□□□□ -0.34
CDKN3-208ENST00000555837 HRCT1Q6UXD1 115 aa12.95□□□□□ -0.34
CDKN3-208ENST00000555837 PSMB2P49721 201 aa12.93□□□□□ -0.34
CDKN3-208ENST00000555837 H3BQ85 93 aa12.92□□□□□ -0.34
CDKN3-208ENST00000555837 Q5XG85 94 aa12.92□□□□□ -0.34
CDKN3-208ENST00000555837 TCL1BO95988 128 aa12.9□□□□□ -0.34
CDKN3-208ENST00000555837 DNAL4O96015 105 aa12.9□□□□□ -0.34
CDKN3-208ENST00000555837 IGLV8-61A0A075B6I0 122 aa12.89□□□□□ -0.35
CDKN3-208ENST00000555837 CLEC2BQ92478 149 aa12.88□□□□□ -0.35
CDKN3-208ENST00000555837 M0R143 59 aa12.87□□□□□ -0.35
CDKN3-208ENST00000555837 TRIAP1O43715 76 aa12.87□□□□□ -0.35
CDKN3-208ENST00000555837 LPAP08519 4548 aa12.87□□□□□ -0.35
CDKN3-208ENST00000555837 KRTAP13-3Q3SY46 172 aa12.83□□□□□ -0.36
CDKN3-208ENST00000555837 FAM218AQ96MZ4 157 aa12.83□□□□□ -0.36
CDKN3-208ENST00000555837 TSTD3H0UI37 97 aa12.81□□□□□ -0.36
CDKN3-208ENST00000555837 K7ERJ3 54 aa12.81□□□□□ -0.36
CDKN3-208ENST00000555837 NDUFV3P56181 108 aaKnown RBP12.8□□□□□ -0.36
CDKN3-208ENST00000555837 SCGB1C2P0DMR2 95 aa12.79□□□□□ -0.36
CDKN3-208ENST00000555837 FABP2P12104 132 aa12.79□□□□□ -0.36
CDKN3-208ENST00000555837 IGFL1Q6UW32 110 aa12.79□□□□□ -0.36
CDKN3-208ENST00000555837 ORMDL1Q9P0S3 153 aa12.79□□□□□ -0.36
CDKN3-208ENST00000555837 A0A0U1RQV1 116 aa12.76□□□□□ -0.37
CDKN3-208ENST00000555837 TMEM256-PLSCR3K7ERE1 68 aa12.76□□□□□ -0.37
CDKN3-208ENST00000555837 TRBV7-7A0A0K0K1E9 115 aa12.75□□□□□ -0.37
CDKN3-208ENST00000555837 H3BMG7 143 aa12.74□□□□□ -0.37
CDKN3-208ENST00000555837 ASB16-AS1Q495Z4 193 aa12.74□□□□□ -0.37
CDKN3-208ENST00000555837 A0A0G2JQZ4 141 aa12.73□□□□□ -0.37
CDKN3-208ENST00000555837 SS18L2Q9UHA2 77 aa12.73□□□□□ -0.37
CDKN3-208ENST00000555837 SEC61BP60468 96 aaKnown RBP12.72□□□□□ -0.37
CDKN3-208ENST00000555837 H3BUT2 72 aa12.71□□□□□ -0.37
CDKN3-208ENST00000555837 TRACP01848 142 aa12.71□□□□□ -0.37
CDKN3-208ENST00000555837 C1orf195Q5TG92 126 aa12.71□□□□□ -0.37
CDKN3-208ENST00000555837 Q6Q795 121 aa12.71□□□□□ -0.37
CDKN3-208ENST00000555837 TEN1Q86WV5 123 aa12.71□□□□□ -0.37
CDKN3-208ENST00000555837 LYRM7Q5U5X0 104 aa12.66□□□□□ -0.38
CDKN3-208ENST00000555837 LST1O00453 97 aa12.65□□□□□ -0.38
CDKN3-208ENST00000555837 UBE2V1Q13404 147 aa12.65□□□□□ -0.38
CDKN3-208ENST00000555837 LOC105371267A0A1B0GV96 52 aa12.64□□□□□ -0.39
CDKN3-208ENST00000555837 XP32Q5T750 250 aa12.64□□□□□ -0.39
CDKN3-208ENST00000555837 RNF213Q63HN8 5207 aa12.64□□□□□ -0.39
CDKN3-208ENST00000555837 ANKRD29Q8N6D5 301 aa12.63□□□□□ -0.39
CDKN3-208ENST00000555837 ATXN8Q156A1 80 aa12.59□□□□□ -0.39
CDKN3-208ENST00000555837 C9orf92A6NGG3 77 aa12.57□□□□□ -0.4
CDKN3-208ENST00000555837 TRBV7-4A0A0J9YYF1 115 aa12.55□□□□□ -0.4
CDKN3-208ENST00000555837 C21orf62-AS1Q17RA5 79 aa12.54□□□□□ -0.4
CDKN3-208ENST00000555837 A0A087WSZ3 146 aa12.53□□□□□ -0.4
CDKN3-208ENST00000555837 RBM3P98179 157 aaKnown RBP12.53□□□□□ -0.4
CDKN3-208ENST00000555837 DSCR8Q96T75 97 aa12.53□□□□□ -0.4
CDKN3-208ENST00000555837 TRBV20-1A0A075B6N2 111 aa12.52□□□□□ -0.41
CDKN3-208ENST00000555837 BAALC-AS2P0C853 105 aa12.52□□□□□ -0.41
CDKN3-208ENST00000555837 BATFQ16520 125 aa12.52□□□□□ -0.41
CDKN3-208ENST00000555837 CCKP06307 115 aa12.48□□□□□ -0.41
CDKN3-208ENST00000555837 A0A1W2PNM2 257 aa12.47□□□□□ -0.41
CDKN3-208ENST00000555837 JMJD7-PLA2G4BH0Y9G9 81 aa12.47□□□□□ -0.41
CDKN3-208ENST00000555837 A0A1B0GV72 72 aa12.45□□□□□ -0.42
CDKN3-208ENST00000555837 C9JAW5 83 aa12.44□□□□□ -0.42
CDKN3-208ENST00000555837 NAA38Q9BRA0 125 aaKnown RBP12.43□□□□□ -0.42
CDKN3-208ENST00000555837 MUC17Q685J3 4493 aa12.43□□□□□ -0.42
CDKN3-208ENST00000555837 PDE6GP18545 87 aa12.41□□□□□ -0.42
CDKN3-208ENST00000555837 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
CDKN3-208ENST00000555837 RPL37P61927 97 aaKnown RBP12.39□□□□□ -0.43
CDKN3-208ENST00000555837 VPS25Q9BRG1 176 aa12.39□□□□□ -0.43
CDKN3-208ENST00000555837 MUC2Q02817 5179 aa12.39□□□□□ -0.43
CDKN3-208ENST00000555837 A0A1B0GW54 56 aa12.38□□□□□ -0.43
CDKN3-208ENST00000555837 PCOTHQ58A44 107 aa12.36□□□□□ -0.43
CDKN3-208ENST00000555837 OBSCN-AS1Q96MR7 158 aa12.36□□□□□ -0.43
CDKN3-208ENST00000555837 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
CDKN3-208ENST00000555837 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
CDKN3-208ENST00000555837 IGKV4-1P06312 121 aa12.32□□□□□ -0.44
CDKN3-208ENST00000555837 Q96NJ1 140 aa12.32□□□□□ -0.44
CDKN3-208ENST00000555837 LOC110117498A0A087WWA1 95 aa12.3□□□□□ -0.44
CDKN3-208ENST00000555837 TAX1BP3O14907 124 aa12.3□□□□□ -0.44
CDKN3-208ENST00000555837 ATP11AUNQ6ZP68 121 aa12.3□□□□□ -0.44
CDKN3-208ENST00000555837 Q75L30 129 aa12.3□□□□□ -0.44
CDKN3-208ENST00000555837 H3BT86 120 aa12.28□□□□□ -0.44
CDKN3-208ENST00000555837 J3KT08 172 aa12.27□□□□□ -0.45
CDKN3-208ENST00000555837 LINC00472Q9H8W2 130 aa12.27□□□□□ -0.45
CDKN3-208ENST00000555837 COL5A1-AS1Q5SY13 56 aa12.26□□□□□ -0.45
CDKN3-208ENST00000555837 LINC00313P59037 77 aa12.25□□□□□ -0.45
CDKN3-208ENST00000555837 Q6ZQT0 140 aa12.24□□□□□ -0.45
CDKN3-208ENST00000555837 C20orf166-AS1Q96NR2 134 aa12.19□□□□□ -0.46
CDKN3-208ENST00000555837 KRTAP4-1Q9BYQ7 146 aa12.19□□□□□ -0.46
CDKN3-208ENST00000555837 C14orf132Q9NPU4 83 aa12.19□□□□□ -0.46
CDKN3-208ENST00000555837 SPCS1Q9Y6A9 102 aa12.19□□□□□ -0.46
CDKN3-208ENST00000555837 NDUFB1O75438 58 aa12.18□□□□□ -0.46
CDKN3-208ENST00000555837 C8orf87E5RJ46 101 aa12.17□□□□□ -0.46
CDKN3-208ENST00000555837 DSCR10P59022 87 aa12.16□□□□□ -0.46
CDKN3-208ENST00000555837 DEFB116Q30KQ4 102 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms