RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DOPEY2Q9Y3R5 2298 aa0.33□□□□□ -2.36
SRP54-204ENST00000553923 SNRPGP15A8MWD9 76 aa0.33□□□□□ -2.36
SRP54-204ENST00000553923 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
SRP54-204ENST00000553923 CMC2Q9NRP2 79 aa0.33□□□□□ -2.36
SRP54-204ENST00000553923 PREX2Q70Z35 1606 aa0.33□□□□□ -2.36
SRP54-204ENST00000553923 TPRP12270 2363 aaKnown RBP0.33□□□□□ -2.36
SRP54-204ENST00000553923 PTPRZ1P23471 2315 aaPredicted RBP0.32□□□□□ -2.36
SRP54-204ENST00000553923 H3BUA1 57 aa0.32□□□□□ -2.36
SRP54-204ENST00000553923 ITSN2Q9NZM3 1697 aa0.32□□□□□ -2.36
SRP54-204ENST00000553923 SMIM27A0A1W2PRY6 76 aa0.31□□□□□ -2.36
SRP54-204ENST00000553923 EFCAB6Q5THR3 1501 aa0.31□□□□□ -2.36
SRP54-204ENST00000553923 SYCP2Q9BX26 1530 aa0.31□□□□□ -2.36
SRP54-204ENST00000553923 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
SRP54-204ENST00000553923 FANCD2Q9BXW9 1451 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 CLASP1Q7Z460 1538 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 H3BNG1 76 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 KMT2DO14686 5537 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 KAAG1Q9UBP8 84 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 KIF1AQ12756 1690 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 LY75O60449 1722 aa0.3□□□□□ -2.36
SRP54-204ENST00000553923 AGLP35573 1532 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 PKDREJQ9NTG1 2253 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 MAST1Q9Y2H9 1570 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 WFDC10BQ8IUB3 73 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 F8P00451 2351 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 SPTBN1Q01082 2364 aaKnown RBP0.29□□□□□ -2.36
SRP54-204ENST00000553923 VWFP04275 2813 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 TRANK1O15050 2925 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 REV3LO60673 3130 aa0.29□□□□□ -2.36
SRP54-204ENST00000553923 CROCC2H7BZ55 1655 aa0.28□□□□□ -2.36
SRP54-204ENST00000553923 TFF3Q07654 80 aa0.28□□□□□ -2.36
SRP54-204ENST00000553923 AKAP6Q13023 2319 aa0.28□□□□□ -2.36
SRP54-204ENST00000553923 MROH2AA6NES4 1674 aa0.27□□□□□ -2.37
SRP54-204ENST00000553923 SPRR2DP22532 72 aa0.27□□□□□ -2.37
SRP54-204ENST00000553923 TNXBP22105 4242 aa0.27□□□□□ -2.37
SRP54-204ENST00000553923 ADCY10Q96PN6 1610 aa0.27□□□□□ -2.37
SRP54-204ENST00000553923 UNC79Q9P2D8 2635 aa0.26□□□□□ -2.37
SRP54-204ENST00000553923 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
SRP54-204ENST00000553923 TOMM5Q8N4H5 51 aa0.26□□□□□ -2.37
SRP54-204ENST00000553923 NOP10Q9NPE3 64 aaKnown RBP0.26□□□□□ -2.37
SRP54-204ENST00000553923 ABCC8Q09428 1581 aa0.26□□□□□ -2.37
SRP54-204ENST00000553923 AKAP13Q12802 2813 aa0.26□□□□□ -2.37
SRP54-204ENST00000553923 PKD1L1Q8TDX9 2849 aa0.25□□□□□ -2.37
SRP54-204ENST00000553923 CNOT1A5YKK6 2376 aaKnown RBP0.25□□□□□ -2.37
SRP54-204ENST00000553923 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
SRP54-204ENST00000553923 SMIM2Q9BVW6 85 aa0.25□□□□□ -2.37
SRP54-204ENST00000553923 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
SRP54-204ENST00000553923 FAT2Q9NYQ8 4349 aa0.24□□□□□ -2.37
SRP54-204ENST00000553923 BSNQ9UPA5 3926 aa0.24□□□□□ -2.37
SRP54-204ENST00000553923 CHD6Q8TD26 2715 aa0.24□□□□□ -2.37
SRP54-204ENST00000553923 CDC42BPAQ5VT25 1732 aa0.24□□□□□ -2.37
SRP54-204ENST00000553923 ALMS1Q8TCU4 4167 aa0.24□□□□□ -2.37
SRP54-204ENST00000553923 GVINP1Q7Z2Y8 2422 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 FAT4Q6V0I7 4981 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 IGLV5-48A0A075B6I7 105 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 C9orf92A6NGG3 77 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 ANKRD36CQ5JPF3 1778 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 WNK2Q9Y3S1 2297 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 ATRQ13535 2644 aa0.23□□□□□ -2.37
SRP54-204ENST00000553923 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
SRP54-204ENST00000553923 PRKDCP78527 4128 aaKnown RBP0.23□□□□□ -2.37
SRP54-204ENST00000553923 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
SRP54-204ENST00000553923 LINC01546A6NGU7 62 aa0.22□□□□□ -2.37
SRP54-204ENST00000553923 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
SRP54-204ENST00000553923 BPTFQ12830 3046 aa0.22□□□□□ -2.37
SRP54-204ENST00000553923 CELSR1Q9NYQ6 3014 aa0.22□□□□□ -2.37
SRP54-204ENST00000553923 DSPP15924 2871 aaKnown RBP0.22□□□□□ -2.37
SRP54-204ENST00000553923 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
SRP54-204ENST00000553923 ABCA2Q9BZC7 2435 aa0.22□□□□□ -2.37
SRP54-204ENST00000553923 TOGARAM1Q9Y4F4 1720 aa0.21□□□□□ -2.38
SRP54-204ENST00000553923 LPAP08519 4548 aa0.21□□□□□ -2.38
SRP54-204ENST00000553923 SPRR2BP35325 72 aa0.21□□□□□ -2.38
SRP54-204ENST00000553923 LMO7Q8WWI1 1683 aa0.21□□□□□ -2.38
SRP54-204ENST00000553923 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
SRP54-204ENST00000553923 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
SRP54-204ENST00000553923 IGF2RP11717 2491 aa0.2□□□□□ -2.38
SRP54-204ENST00000553923 DEFB110Q30KQ9 67 aa0.2□□□□□ -2.38
SRP54-204ENST00000553923 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
SRP54-204ENST00000553923 CSPG4Q6UVK1 2322 aa0.2□□□□□ -2.38
SRP54-204ENST00000553923 TNRC18O15417 2968 aaPredicted RBP0.2□□□□□ -2.38
SRP54-204ENST00000553923 ABCA5Q8WWZ7 1642 aa0.2□□□□□ -2.38
SRP54-204ENST00000553923 PRRC2CQ9Y520 2896 aaKnown RBP0.2□□□□□ -2.38
SRP54-204ENST00000553923 DSTQ03001 7570 aaKnown RBP0.19□□□□□ -2.38
SRP54-204ENST00000553923 MMP24-AS1A0A0U1RRL7 71 aa0.19□□□□□ -2.38
SRP54-204ENST00000553923 M0QY20 66 aa0.19□□□□□ -2.38
SRP54-204ENST00000553923 KNL1Q8NG31 2342 aa0.19□□□□□ -2.38
SRP54-204ENST00000553923 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
SRP54-204ENST00000553923 PTPN13Q12923 2485 aa0.19□□□□□ -2.38
SRP54-204ENST00000553923 NCOR1O75376 2440 aa0.18□□□□□ -2.38
SRP54-204ENST00000553923 NRXN3Q9Y4C0 1643 aa0.18□□□□□ -2.38
SRP54-204ENST00000553923 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
SRP54-204ENST00000553923 EP300Q09472 2414 aaPredicted RBP0.17□□□□□ -2.38
SRP54-204ENST00000553923 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
SRP54-204ENST00000553923 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
SRP54-204ENST00000553923 DEFB131AP59861 70 aa0.17□□□□□ -2.38
SRP54-204ENST00000553923 PDE4DIPQ5VU43 2346 aa0.17□□□□□ -2.38
SRP54-204ENST00000553923 LYSTQ99698 3801 aa0.17□□□□□ -2.38
SRP54-204ENST00000553923 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
SRP54-204ENST00000553923 HSPG2P98160 4391 aa0.17□□□□□ -2.38
SRP54-204ENST00000553923 A0A1B0GUL6 1792 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms