RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 KTN1-AS1Q86SY8 53 aa9.82□□□□□ -0.84
ARHGEF40-202ENST00000553709 MYO15AQ9UKN7 3530 aa9.82□□□□□ -0.84
ARHGEF40-202ENST00000553709 WIPF1O43516 503 aa9.81□□□□□ -0.84
ARHGEF40-202ENST00000553709 PSORS1C2Q9UIG4 136 aa9.81□□□□□ -0.84
ARHGEF40-202ENST00000553709 CHD6Q8TD26 2715 aa9.81□□□□□ -0.84
ARHGEF40-202ENST00000553709 UQCR11O14957 56 aa9.8□□□□□ -0.84
ARHGEF40-202ENST00000553709 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
ARHGEF40-202ENST00000553709 IGLV7-43P04211 117 aa9.8□□□□□ -0.84
ARHGEF40-202ENST00000553709 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
ARHGEF40-202ENST00000553709 SPANXA2-OT1Q8N9U9 137 aa9.75□□□□□ -0.85
ARHGEF40-202ENST00000553709 NBEAQ8NFP9 2946 aa9.75□□□□□ -0.85
ARHGEF40-202ENST00000553709 LOC400499M0QZD8 3231 aa9.75□□□□□ -0.85
ARHGEF40-202ENST00000553709 LCA10Q71F78 164 aa9.74□□□□□ -0.85
ARHGEF40-202ENST00000553709 TEX15Q9BXT5 2789 aa9.74□□□□□ -0.85
ARHGEF40-202ENST00000553709 COL12A1Q99715 3063 aa9.74□□□□□ -0.85
ARHGEF40-202ENST00000553709 LRBAP50851 2863 aa9.73□□□□□ -0.85
ARHGEF40-202ENST00000553709 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
ARHGEF40-202ENST00000553709 MAST4O15021 2626 aa9.71□□□□□ -0.85
ARHGEF40-202ENST00000553709 MIR22HGQ0VDD5 57 aa9.7□□□□□ -0.86
ARHGEF40-202ENST00000553709 C9orf92A6NGG3 77 aa9.69□□□□□ -0.86
ARHGEF40-202ENST00000553709 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF40-202ENST00000553709 KALRNO60229 2985 aa9.66□□□□□ -0.86
ARHGEF40-202ENST00000553709 Q8NDZ9 215 aa9.64□□□□□ -0.87
ARHGEF40-202ENST00000553709 UTP20O75691 2785 aaKnown RBP9.62□□□□□ -0.87
ARHGEF40-202ENST00000553709 COX6B2Q6YFQ2 88 aa9.62□□□□□ -0.87
ARHGEF40-202ENST00000553709 Q5XG85 94 aa9.6□□□□□ -0.87
ARHGEF40-202ENST00000553709 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
ARHGEF40-202ENST00000553709 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
ARHGEF40-202ENST00000553709 ZZEF1O43149 2961 aa9.58□□□□□ -0.88
ARHGEF40-202ENST00000553709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
ARHGEF40-202ENST00000553709 SETXQ7Z333 2677 aaKnown RBP9.58□□□□□ -0.88
ARHGEF40-202ENST00000553709 RBM12B-AS1Q9P1G2 102 aa9.57□□□□□ -0.88
ARHGEF40-202ENST00000553709 ITPR1Q14643 2758 aa9.57□□□□□ -0.88
ARHGEF40-202ENST00000553709 SPRR1AP35321 89 aa9.56□□□□□ -0.88
ARHGEF40-202ENST00000553709 HRNRQ86YZ3 2850 aaPredicted RBP9.56□□□□□ -0.88
ARHGEF40-202ENST00000553709 Q1T7F1 81 aa9.56□□□□□ -0.88
ARHGEF40-202ENST00000553709 CDC42SE1Q9NRR8 79 aa9.56□□□□□ -0.88
ARHGEF40-202ENST00000553709 Q8N1X5 172 aa9.55□□□□□ -0.88
ARHGEF40-202ENST00000553709 TNP2Q05952 138 aa9.55□□□□□ -0.88
ARHGEF40-202ENST00000553709 DMDP11532 3685 aa9.53□□□□□ -0.88
ARHGEF40-202ENST00000553709 CYSTM1Q9H1C7 97 aa9.53□□□□□ -0.88
ARHGEF40-202ENST00000553709 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
ARHGEF40-202ENST00000553709 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
ARHGEF40-202ENST00000553709 APCP25054 2843 aa9.52□□□□□ -0.89
ARHGEF40-202ENST00000553709 IGLV7-46A0A075B6I9 117 aa9.52□□□□□ -0.89
ARHGEF40-202ENST00000553709 GCN1Q92616 2671 aaKnown RBP9.5□□□□□ -0.89
ARHGEF40-202ENST00000553709 BAHCC1Q9P281 2608 aa9.5□□□□□ -0.89
ARHGEF40-202ENST00000553709 ITPR2Q14571 2701 aa9.5□□□□□ -0.89
ARHGEF40-202ENST00000553709 H3BS24 57 aa9.5□□□□□ -0.89
ARHGEF40-202ENST00000553709 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
ARHGEF40-202ENST00000553709 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF40-202ENST00000553709 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
ARHGEF40-202ENST00000553709 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
ARHGEF40-202ENST00000553709 TACC2O95359 2948 aa9.47□□□□□ -0.89
ARHGEF40-202ENST00000553709 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
ARHGEF40-202ENST00000553709 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
ARHGEF40-202ENST00000553709 PLAC8Q9NZF1 115 aa9.44□□□□□ -0.9
ARHGEF40-202ENST00000553709 HRES1P13985 223 aa9.44□□□□□ -0.9
ARHGEF40-202ENST00000553709 SPRR1BP22528 89 aa9.43□□□□□ -0.9
ARHGEF40-202ENST00000553709 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
ARHGEF40-202ENST00000553709 LINC00472Q9H8W2 130 aa9.4□□□□□ -0.91
ARHGEF40-202ENST00000553709 Q75L30 129 aa9.38□□□□□ -0.91
ARHGEF40-202ENST00000553709 A0A0D9SG42 100 aa9.38□□□□□ -0.91
ARHGEF40-202ENST00000553709 STAB1Q9NY15 2570 aa9.38□□□□□ -0.91
ARHGEF40-202ENST00000553709 ZANQ9Y493 2812 aa9.38□□□□□ -0.91
ARHGEF40-202ENST00000553709 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
ARHGEF40-202ENST00000553709 CFAP47Q6ZTR5 3102 aa9.37□□□□□ -0.91
ARHGEF40-202ENST00000553709 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
ARHGEF40-202ENST00000553709 OXTP01178 125 aa9.36□□□□□ -0.91
ARHGEF40-202ENST00000553709 Q8N9P0 234 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF40-202ENST00000553709 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
ARHGEF40-202ENST00000553709 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
ARHGEF40-202ENST00000553709 LAMA5O15230 3695 aa9.34□□□□□ -0.91
ARHGEF40-202ENST00000553709 LINC01558Q9Y6Z2 57 aa9.34□□□□□ -0.91
ARHGEF40-202ENST00000553709 NOTCH1P46531 2555 aa9.33□□□□□ -0.92
ARHGEF40-202ENST00000553709 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
ARHGEF40-202ENST00000553709 DCHS1Q96JQ0 3298 aa9.31□□□□□ -0.92
ARHGEF40-202ENST00000553709 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
ARHGEF40-202ENST00000553709 NBEAL2Q6ZNJ1 2754 aa9.29□□□□□ -0.92
ARHGEF40-202ENST00000553709 RELNP78509 3460 aa9.29□□□□□ -0.92
ARHGEF40-202ENST00000553709 CRYBG3Q68DQ2 2970 aa9.28□□□□□ -0.92
ARHGEF40-202ENST00000553709 A0A1B0GU33 70 aa9.28□□□□□ -0.92
ARHGEF40-202ENST00000553709 CELSR2Q9HCU4 2923 aa9.28□□□□□ -0.92
ARHGEF40-202ENST00000553709 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
ARHGEF40-202ENST00000553709 Q5W150 140 aa9.27□□□□□ -0.93
ARHGEF40-202ENST00000553709 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
ARHGEF40-202ENST00000553709 Q5VV11 94 aa9.25□□□□□ -0.93
ARHGEF40-202ENST00000553709 DCHS2Q6V1P9 2916 aa9.25□□□□□ -0.93
ARHGEF40-202ENST00000553709 KMT2BQ9UMN6 2715 aaPredicted RBP9.24□□□□□ -0.93
ARHGEF40-202ENST00000553709 Q6ZSA8 131 aa9.24□□□□□ -0.93
ARHGEF40-202ENST00000553709 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
ARHGEF40-202ENST00000553709 ZFHX4Q86UP3 3567 aa9.18□□□□□ -0.94
ARHGEF40-202ENST00000553709 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
ARHGEF40-202ENST00000553709 FBN2P35556 2912 aa9.16□□□□□ -0.94
ARHGEF40-202ENST00000553709 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
ARHGEF40-202ENST00000553709 LCE6AA0A183 80 aa9.15□□□□□ -0.94
ARHGEF40-202ENST00000553709 SPINK7P58062 85 aa9.14□□□□□ -0.95
ARHGEF40-202ENST00000553709 PANO1I0J062 215 aa9.11□□□□□ -0.95
ARHGEF40-202ENST00000553709 KRTAP29-1A8MX34 341 aaPredicted RBP9.1□□□□□ -0.95
ARHGEF40-202ENST00000553709 LUZP6Q538Z0 58 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms