RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 CEND1Q8N111 149 aa4.55□□□□□ -1.68
NPAS3-213ENST00000552874 TRAV13-2A0A0B4J235 113 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 ETDCA0A1B0GVM5 59 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 A0A1B0GWB2 263 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 C9orf118A6NHY6 69 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 LINC00483Q53H64 154 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 SMIM11BQ8TCY0 68 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
NPAS3-213ENST00000552874 TRBV7-6A0A0J9YX20 115 aa4.53□□□□□ -1.68
NPAS3-213ENST00000552874 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
NPAS3-213ENST00000552874 PRR26Q8N8Z3 221 aa4.53□□□□□ -1.68
NPAS3-213ENST00000552874 HIGD2AQ9BW72 106 aa4.53□□□□□ -1.68
NPAS3-213ENST00000552874 A6NDN8 102 aa4.52□□□□□ -1.69
NPAS3-213ENST00000552874 J3QR89 54 aa4.52□□□□□ -1.69
NPAS3-213ENST00000552874 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
NPAS3-213ENST00000552874 FAM229BQ4G0N7 80 aa4.52□□□□□ -1.69
NPAS3-213ENST00000552874 OR13C6PQ8NH95 151 aa4.52□□□□□ -1.69
NPAS3-213ENST00000552874 ANAPC11Q9NYG5 84 aa4.52□□□□□ -1.69
NPAS3-213ENST00000552874 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
NPAS3-213ENST00000552874 K7ERJ3 54 aa4.5□□□□□ -1.69
NPAS3-213ENST00000552874 SPRR1BP22528 89 aa4.5□□□□□ -1.69
NPAS3-213ENST00000552874 COX7BP24311 80 aa4.5□□□□□ -1.69
NPAS3-213ENST00000552874 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
NPAS3-213ENST00000552874 ST20-AS1Q8NBB2 130 aa4.5□□□□□ -1.69
NPAS3-213ENST00000552874 A0A1W2PPM0 123 aa4.49□□□□□ -1.69
NPAS3-213ENST00000552874 DHRS4-AS1Q9P1J3 65 aa4.49□□□□□ -1.69
NPAS3-213ENST00000552874 IGLV5-48A0A075B6I7 105 aa4.48□□□□□ -1.69
NPAS3-213ENST00000552874 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
NPAS3-213ENST00000552874 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
NPAS3-213ENST00000552874 SPCS1Q9Y6A9 102 aa4.48□□□□□ -1.69
NPAS3-213ENST00000552874 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
NPAS3-213ENST00000552874 F8W1H4 67 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 TRIAP1O43715 76 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 CRYGAP11844 174 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 FABP2P12104 132 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
NPAS3-213ENST00000552874 H3BUT2 72 aa4.46□□□□□ -1.7
NPAS3-213ENST00000552874 RAB37Q96AX2 223 aa4.46□□□□□ -1.7
NPAS3-213ENST00000552874 GAGE2AQ6NT46 116 aa4.45□□□□□ -1.7
NPAS3-213ENST00000552874 Q8N377 158 aa4.45□□□□□ -1.7
NPAS3-213ENST00000552874 SS18L2Q9UHA2 77 aa4.45□□□□□ -1.7
NPAS3-213ENST00000552874 H7C2G1 150 aa4.44□□□□□ -1.7
NPAS3-213ENST00000552874 TYMSOSQ8TAI1 123 aa4.44□□□□□ -1.7
NPAS3-213ENST00000552874 Q6ZQY7 126 aa4.43□□□□□ -1.7
NPAS3-213ENST00000552874 PRO0461Q9UI25 63 aa4.43□□□□□ -1.7
NPAS3-213ENST00000552874 hADV29S1A0JD25 119 aa4.42□□□□□ -1.7
NPAS3-213ENST00000552874 MOBPQ13875 183 aa4.42□□□□□ -1.7
NPAS3-213ENST00000552874 C5orf47Q569G3 176 aa4.42□□□□□ -1.7
NPAS3-213ENST00000552874 Q8NBF4 154 aa4.42□□□□□ -1.7
NPAS3-213ENST00000552874 TEX49A0A1B0GTD5 131 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 A0A1B0GX51 115 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 H0YGX0 51 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 Q6Q795 121 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.41□□□□□ -1.7
NPAS3-213ENST00000552874 LINC00304Q8N9R0 145 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 CLEC2BQ92478 149 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 ANAPC13Q9BS18 74 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
NPAS3-213ENST00000552874 IGLV8-61A0A075B6I0 122 aa4.4□□□□□ -1.71
NPAS3-213ENST00000552874 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.71
NPAS3-213ENST00000552874 H3BMG7 143 aa4.4□□□□□ -1.71
NPAS3-213ENST00000552874 Q1RN00 199 aa4.4□□□□□ -1.71
NPAS3-213ENST00000552874 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
NPAS3-213ENST00000552874 LST1O00453 97 aa4.39□□□□□ -1.71
NPAS3-213ENST00000552874 MT-ATP8P03928 68 aa4.39□□□□□ -1.71
NPAS3-213ENST00000552874 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
NPAS3-213ENST00000552874 PPDPFLQ8WWR9 84 aa4.39□□□□□ -1.71
NPAS3-213ENST00000552874 SLC25A20O43772 301 aa4.38□□□□□ -1.71
NPAS3-213ENST00000552874 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
NPAS3-213ENST00000552874 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
NPAS3-213ENST00000552874 NAA38Q9BRA0 125 aaKnown RBP4.38□□□□□ -1.71
NPAS3-213ENST00000552874 ETDBQ3ZM63 59 aa4.37□□□□□ -1.71
NPAS3-213ENST00000552874 C9orf153Q5TBE3 101 aa4.37□□□□□ -1.71
NPAS3-213ENST00000552874 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
NPAS3-213ENST00000552874 TRACP01848 142 aa4.36□□□□□ -1.71
NPAS3-213ENST00000552874 LAMTOR3Q9UHA4 124 aa4.36□□□□□ -1.71
NPAS3-213ENST00000552874 TCL1BO95988 128 aa4.35□□□□□ -1.71
NPAS3-213ENST00000552874 SPINK1P00995 79 aa4.35□□□□□ -1.71
NPAS3-213ENST00000552874 PSMB2P49721 201 aa4.35□□□□□ -1.71
NPAS3-213ENST00000552874 NDUFV3P56181 108 aaKnown RBP4.35□□□□□ -1.71
NPAS3-213ENST00000552874 SPAG11AQ6PDA7 123 aa4.35□□□□□ -1.71
NPAS3-213ENST00000552874 CD164Q04900 197 aa4.34□□□□□ -1.71
NPAS3-213ENST00000552874 IGFL1Q6UW32 110 aa4.34□□□□□ -1.71
NPAS3-213ENST00000552874 RETNLBQ9BQ08 111 aa4.34□□□□□ -1.71
NPAS3-213ENST00000552874 CCDC179H3BU77 68 aa4.33□□□□□ -1.72
NPAS3-213ENST00000552874 COX6CP09669 75 aa4.33□□□□□ -1.72
NPAS3-213ENST00000552874 Q5XG85 94 aa4.33□□□□□ -1.72
NPAS3-213ENST00000552874 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
NPAS3-213ENST00000552874 MUC2Q02817 5179 aa4.32□□□□□ -1.72
NPAS3-213ENST00000552874 ORMDL1Q9P0S3 153 aa4.32□□□□□ -1.72
NPAS3-213ENST00000552874 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
NPAS3-213ENST00000552874 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
NPAS3-213ENST00000552874 Q6JHZ5 121 aa4.31□□□□□ -1.72
NPAS3-213ENST00000552874 F8WEM9 126 aa4.3□□□□□ -1.72
NPAS3-213ENST00000552874 DNAL4O96015 105 aa4.3□□□□□ -1.72
NPAS3-213ENST00000552874 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms