RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 A0A087WSZ3 146 aa4.2□□□□□ -1.74
PTPRR-211ENST00000551219 SPRR1BP22528 89 aa4.2□□□□□ -1.74
PTPRR-211ENST00000551219 CNBPP62633 177 aaKnown RBP4.2□□□□□ -1.74
PTPRR-211ENST00000551219 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
PTPRR-211ENST00000551219 H0Y9J4 135 aa4.2□□□□□ -1.74
PTPRR-211ENST00000551219 UBE2AP49459 152 aa4.2□□□□□ -1.74
PTPRR-211ENST00000551219 WFDC13Q8IUB5 93 aa4.19□□□□□ -1.74
PTPRR-211ENST00000551219 SETD2Q9BYW2 2564 aaPredicted RBP4.19□□□□□ -1.74
PTPRR-211ENST00000551219 B9D2Q9BPU9 175 aa4.19□□□□□ -1.74
PTPRR-211ENST00000551219 A8MWP4 228 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 MTORP42345 2549 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 A0A096LNI7 61 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 H0Y9P7 68 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 PRLHP81277 87 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 ACANP16112 2415 aa4.18□□□□□ -1.74
PTPRR-211ENST00000551219 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
PTPRR-211ENST00000551219 C14orf177Q52M58 125 aa4.17□□□□□ -1.74
PTPRR-211ENST00000551219 LINC00208Q96KT6 92 aa4.17□□□□□ -1.74
PTPRR-211ENST00000551219 LRCOL1A6NCL2 159 aa4.16□□□□□ -1.74
PTPRR-211ENST00000551219 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
PTPRR-211ENST00000551219 TENM4Q6N022 2769 aa4.16□□□□□ -1.74
PTPRR-211ENST00000551219 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
PTPRR-211ENST00000551219 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
PTPRR-211ENST00000551219 VWFP04275 2813 aa4.16□□□□□ -1.74
PTPRR-211ENST00000551219 A0A0G2JQZ4 141 aa4.15□□□□□ -1.74
PTPRR-211ENST00000551219 IGKV2-24A0A0C4DH68 120 aa4.15□□□□□ -1.75
PTPRR-211ENST00000551219 NDUFS5O43920 106 aa4.15□□□□□ -1.75
PTPRR-211ENST00000551219 RPL37AP61513 92 aaKnown RBP4.15□□□□□ -1.75
PTPRR-211ENST00000551219 PRR4Q16378 134 aa4.15□□□□□ -1.75
PTPRR-211ENST00000551219 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
PTPRR-211ENST00000551219 PSPHP1O15172 72 aa4.14□□□□□ -1.75
PTPRR-211ENST00000551219 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
PTPRR-211ENST00000551219 HIVEP1P15822 2718 aa4.14□□□□□ -1.75
PTPRR-211ENST00000551219 KRTAP24-1Q3LI83 254 aa4.13□□□□□ -1.75
PTPRR-211ENST00000551219 TP53AIP1Q9HCN2 124 aa4.12□□□□□ -1.75
PTPRR-211ENST00000551219 UNC79Q9P2D8 2635 aa4.12□□□□□ -1.75
PTPRR-211ENST00000551219 NOTCH2Q04721 2471 aa4.12□□□□□ -1.75
PTPRR-211ENST00000551219 MMP24-AS1A0A0U1RRL7 71 aa4.12□□□□□ -1.75
PTPRR-211ENST00000551219 A8MUN3 132 aa4.12□□□□□ -1.75
PTPRR-211ENST00000551219 PHF5AQ7RTV0 110 aaKnown RBP4.12□□□□□ -1.75
PTPRR-211ENST00000551219 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
PTPRR-211ENST00000551219 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
PTPRR-211ENST00000551219 MOBPQ13875 183 aa4.11□□□□□ -1.75
PTPRR-211ENST00000551219 Q5VV11 94 aa4.11□□□□□ -1.75
PTPRR-211ENST00000551219 IGLV7-46A0A075B6I9 117 aa4.11□□□□□ -1.75
PTPRR-211ENST00000551219 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
PTPRR-211ENST00000551219 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
PTPRR-211ENST00000551219 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
PTPRR-211ENST00000551219 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
PTPRR-211ENST00000551219 UBE2DNLQ8IWF7 75 aa4.1□□□□□ -1.75
PTPRR-211ENST00000551219 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.75
PTPRR-211ENST00000551219 ITPR2Q14571 2701 aa4.09□□□□□ -1.75
PTPRR-211ENST00000551219 COA5Q86WW8 74 aa4.09□□□□□ -1.75
PTPRR-211ENST00000551219 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 K7EIL1 84 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 CHTF8P0CG12 524 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
PTPRR-211ENST00000551219 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 FASNP49327 2511 aaKnown RBP4.08□□□□□ -1.76
PTPRR-211ENST00000551219 TENM1Q9UKZ4 2725 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 OTOGQ6ZRI0 2925 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 Q6ZR54 194 aa4.08□□□□□ -1.76
PTPRR-211ENST00000551219 NSD1Q96L73 2696 aaPredicted RBP4.07□□□□□ -1.76
PTPRR-211ENST00000551219 PRB2P02812 416 aaPredicted RBP4.07□□□□□ -1.76
PTPRR-211ENST00000551219 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
PTPRR-211ENST00000551219 Q96NJ1 140 aa4.07□□□□□ -1.76
PTPRR-211ENST00000551219 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
PTPRR-211ENST00000551219 APLNQ9ULZ1 77 aa4.07□□□□□ -1.76
PTPRR-211ENST00000551219 TEP1Q99973 2627 aaKnown RBP4.06□□□□□ -1.76
PTPRR-211ENST00000551219 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
PTPRR-211ENST00000551219 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
PTPRR-211ENST00000551219 ATP11AUNQ6ZP68 121 aa4.04□□□□□ -1.76
PTPRR-211ENST00000551219 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
PTPRR-211ENST00000551219 SPACA4Q8TDM5 124 aa4.04□□□□□ -1.76
PTPRR-211ENST00000551219 TRRAPQ9Y4A5 3859 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 ANK2Q01484 3957 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 PCOTHQ58A44 107 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
PTPRR-211ENST00000551219 NBDYA0A0U1RRE5 68 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 A6NED7 52 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 ATRQ13535 2644 aa4.03□□□□□ -1.76
PTPRR-211ENST00000551219 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
PTPRR-211ENST00000551219 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
PTPRR-211ENST00000551219 TENM3Q9P273 2699 aa4.01□□□□□ -1.77
PTPRR-211ENST00000551219 IGHV6-1A0A0B4J1U7 121 aa4.01□□□□□ -1.77
PTPRR-211ENST00000551219 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
PTPRR-211ENST00000551219 PKD1L1Q8TDX9 2849 aa4.01□□□□□ -1.77
PTPRR-211ENST00000551219 PANO1I0J062 215 aa4□□□□□ -1.77
PTPRR-211ENST00000551219 LCA10Q71F78 164 aa4□□□□□ -1.77
PTPRR-211ENST00000551219 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
PTPRR-211ENST00000551219 NUPR2A6NF83 97 aa3.99□□□□□ -1.77
PTPRR-211ENST00000551219 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
PTPRR-211ENST00000551219 A8MU10 97 aa3.99□□□□□ -1.77
PTPRR-211ENST00000551219 HRES1P13985 223 aa3.99□□□□□ -1.77
PTPRR-211ENST00000551219 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
PTPRR-211ENST00000551219 SPAG11AQ6PDA7 123 aa3.98□□□□□ -1.77
PTPRR-211ENST00000551219 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms