RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 Q6ZQY7 126 aa9.46□□□□□ -0.9
RDX-214ENST00000533678 Q8NBF4 154 aa9.46□□□□□ -0.9
RDX-214ENST00000533678 DNAL4O96015 105 aa9.45□□□□□ -0.9
RDX-214ENST00000533678 F8WEM9 126 aa9.44□□□□□ -0.9
RDX-214ENST00000533678 SPINK1P00995 79 aa9.44□□□□□ -0.9
RDX-214ENST00000533678 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.44□□□□□ -0.9
RDX-214ENST00000533678 SPRR1BP22528 89 aa9.43□□□□□ -0.9
RDX-214ENST00000533678 A0A1B0GX51 115 aa9.42□□□□□ -0.9
RDX-214ENST00000533678 OCIAD2Q56VL3 154 aa9.42□□□□□ -0.9
RDX-214ENST00000533678 SNHG12Q9BXW3 62 aa9.42□□□□□ -0.9
RDX-214ENST00000533678 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
RDX-214ENST00000533678 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
RDX-214ENST00000533678 RPS29P62273 56 aaKnown RBP9.4□□□□□ -0.9
RDX-214ENST00000533678 CLEC2BQ92478 149 aa9.4□□□□□ -0.9
RDX-214ENST00000533678 RETNLBQ9BQ08 111 aa9.39□□□□□ -0.91
RDX-214ENST00000533678 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
RDX-214ENST00000533678 Q8N377 158 aa9.38□□□□□ -0.91
RDX-214ENST00000533678 PPDPFLQ8WWR9 84 aa9.38□□□□□ -0.91
RDX-214ENST00000533678 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
RDX-214ENST00000533678 PCP4L1A6NKN8 68 aa9.37□□□□□ -0.91
RDX-214ENST00000533678 FP248Q71RG6 208 aaPredicted RBP9.37□□□□□ -0.91
RDX-214ENST00000533678 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
RDX-214ENST00000533678 FABP2P12104 132 aa9.36□□□□□ -0.91
RDX-214ENST00000533678 H3BQ85 93 aa9.35□□□□□ -0.91
RDX-214ENST00000533678 LINC01547P58512 204 aaPredicted RBP9.35□□□□□ -0.91
RDX-214ENST00000533678 ORMDL1Q9P0S3 153 aa9.35□□□□□ -0.91
RDX-214ENST00000533678 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
RDX-214ENST00000533678 NAA38Q9BRA0 125 aaKnown RBP9.34□□□□□ -0.91
RDX-214ENST00000533678 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
RDX-214ENST00000533678 HRCT1Q6UXD1 115 aa9.32□□□□□ -0.92
RDX-214ENST00000533678 SMIM29Q86T20 159 aa9.32□□□□□ -0.92
RDX-214ENST00000533678 H3BUT2 72 aa9.31□□□□□ -0.92
RDX-214ENST00000533678 ATXN8Q156A1 80 aa9.31□□□□□ -0.92
RDX-214ENST00000533678 TMEM256-PLSCR3K7ERE1 68 aa9.3□□□□□ -0.92
RDX-214ENST00000533678 TRACP01848 142 aa9.3□□□□□ -0.92
RDX-214ENST00000533678 LST1O00453 97 aa9.29□□□□□ -0.92
RDX-214ENST00000533678 MUC2Q02817 5179 aa9.28□□□□□ -0.92
RDX-214ENST00000533678 NDUFV3P56181 108 aaKnown RBP9.28□□□□□ -0.92
RDX-214ENST00000533678 Q6JHZ5 121 aa9.28□□□□□ -0.92
RDX-214ENST00000533678 CDIP1Q9H305 208 aa9.28□□□□□ -0.92
RDX-214ENST00000533678 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
RDX-214ENST00000533678 COL5A1-AS1Q5SY13 56 aa9.27□□□□□ -0.93
RDX-214ENST00000533678 LIMD2Q9BT23 127 aa9.27□□□□□ -0.93
RDX-214ENST00000533678 TRBV20-1A0A075B6N2 111 aa9.26□□□□□ -0.93
RDX-214ENST00000533678 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
RDX-214ENST00000533678 CD164Q04900 197 aa9.26□□□□□ -0.93
RDX-214ENST00000533678 H3BMG7 143 aa9.25□□□□□ -0.93
RDX-214ENST00000533678 TCL1BO95988 128 aa9.24□□□□□ -0.93
RDX-214ENST00000533678 TAX1BP3O14907 124 aa9.23□□□□□ -0.93
RDX-214ENST00000533678 FAT4Q6V0I7 4981 aa9.22□□□□□ -0.93
RDX-214ENST00000533678 A0A1B0GV72 72 aa9.22□□□□□ -0.93
RDX-214ENST00000533678 A0A1W2PPM0 123 aa9.22□□□□□ -0.93
RDX-214ENST00000533678 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
RDX-214ENST00000533678 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
RDX-214ENST00000533678 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
RDX-214ENST00000533678 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
RDX-214ENST00000533678 IGFL1Q6UW32 110 aa9.2□□□□□ -0.94
RDX-214ENST00000533678 MUC17Q685J3 4493 aa9.19□□□□□ -0.94
RDX-214ENST00000533678 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
RDX-214ENST00000533678 ANKRD29Q8N6D5 301 aa9.19□□□□□ -0.94
RDX-214ENST00000533678 C9JAW5 83 aa9.18□□□□□ -0.94
RDX-214ENST00000533678 Q5XG85 94 aa9.17□□□□□ -0.94
RDX-214ENST00000533678 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
RDX-214ENST00000533678 RBM3P98179 157 aaKnown RBP9.15□□□□□ -0.94
RDX-214ENST00000533678 DSCR8Q96T75 97 aa9.15□□□□□ -0.94
RDX-214ENST00000533678 SPCS1Q9Y6A9 102 aa9.15□□□□□ -0.94
RDX-214ENST00000533678 TEN1Q86WV5 123 aa9.13□□□□□ -0.95
RDX-214ENST00000533678 TRBV7-7A0A0K0K1E9 115 aa9.12□□□□□ -0.95
RDX-214ENST00000533678 JMJD7-PLA2G4BH0Y9G9 81 aa9.12□□□□□ -0.95
RDX-214ENST00000533678 VPS25Q9BRG1 176 aa9.11□□□□□ -0.95
RDX-214ENST00000533678 SS18L2Q9UHA2 77 aa9.1□□□□□ -0.95
RDX-214ENST00000533678 CCKP06307 115 aa9.08□□□□□ -0.96
RDX-214ENST00000533678 GTF2H5Q6ZYL4 71 aa9.08□□□□□ -0.96
RDX-214ENST00000533678 H3BT86 120 aa9.07□□□□□ -0.96
RDX-214ENST00000533678 SEC61BP60468 96 aaKnown RBP9.07□□□□□ -0.96
RDX-214ENST00000533678 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
RDX-214ENST00000533678 Q6Q795 121 aa9.06□□□□□ -0.96
RDX-214ENST00000533678 MTURNQ8N3F0 131 aa9.06□□□□□ -0.96
RDX-214ENST00000533678 A0A087WSZ3 146 aa9.05□□□□□ -0.96
RDX-214ENST00000533678 XP32Q5T750 250 aa9.05□□□□□ -0.96
RDX-214ENST00000533678 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
RDX-214ENST00000533678 TRBV7-4A0A0J9YYF1 115 aa9.04□□□□□ -0.96
RDX-214ENST00000533678 K7EP34 96 aa9.03□□□□□ -0.96
RDX-214ENST00000533678 PDE6GP18545 87 aa9.02□□□□□ -0.97
RDX-214ENST00000533678 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
RDX-214ENST00000533678 C21orf62-AS1Q17RA5 79 aa9.01□□□□□ -0.97
RDX-214ENST00000533678 C14orf132Q9NPU4 83 aa9□□□□□ -0.97
RDX-214ENST00000533678 LOC110117498A0A087WWA1 95 aa8.96□□□□□ -0.98
RDX-214ENST00000533678 C9orf92A6NGG3 77 aa8.96□□□□□ -0.98
RDX-214ENST00000533678 Q6ZQT0 140 aa8.95□□□□□ -0.98
RDX-214ENST00000533678 A0A1B0GW54 56 aa8.92□□□□□ -0.98
RDX-214ENST00000533678 F8W1H4 67 aa8.92□□□□□ -0.98
RDX-214ENST00000533678 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
RDX-214ENST00000533678 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
RDX-214ENST00000533678 IGKV4-1P06312 121 aa8.9□□□□□ -0.98
RDX-214ENST00000533678 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
RDX-214ENST00000533678 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
RDX-214ENST00000533678 NREPQ16612 68 aa8.86□□□□□ -0.99
RDX-214ENST00000533678 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
RDX-214ENST00000533678 PRO0461Q9UI25 63 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms