RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 AGLP35573 1532 aa0.64□□□□□ -2.31
AC055878.1-201ENST00000531858 EFCAB6Q5THR3 1501 aa0.64□□□□□ -2.31
AC055878.1-201ENST00000531858 GVINP1Q7Z2Y8 2422 aa0.64□□□□□ -2.31
AC055878.1-201ENST00000531858 ABCC8Q09428 1581 aa0.64□□□□□ -2.31
AC055878.1-201ENST00000531858 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
AC055878.1-201ENST00000531858 H0YGG7 62 aa0.63□□□□□ -2.31
AC055878.1-201ENST00000531858 WT1-ASQ06250 92 aa0.63□□□□□ -2.31
AC055878.1-201ENST00000531858 KRTAP5-10Q6L8G5 202 aa0.63□□□□□ -2.31
AC055878.1-201ENST00000531858 PRM1P04553 51 aa0.62□□□□□ -2.31
AC055878.1-201ENST00000531858 ABCA5Q8WWZ7 1642 aa0.61□□□□□ -2.31
AC055878.1-201ENST00000531858 H3BUA1 57 aa0.61□□□□□ -2.31
AC055878.1-201ENST00000531858 PRLHP81277 87 aa0.61□□□□□ -2.31
AC055878.1-201ENST00000531858 WNK2Q9Y3S1 2297 aa0.61□□□□□ -2.31
AC055878.1-201ENST00000531858 LINC00308Q8TCZ7 52 aa0.6□□□□□ -2.31
AC055878.1-201ENST00000531858 VWFP04275 2813 aa0.59□□□□□ -2.32
AC055878.1-201ENST00000531858 SPRR2DP22532 72 aa0.58□□□□□ -2.32
AC055878.1-201ENST00000531858 S4R3F8 94 aa0.58□□□□□ -2.32
AC055878.1-201ENST00000531858 NRXN3Q9Y4C0 1643 aa0.56□□□□□ -2.32
AC055878.1-201ENST00000531858 TNXBP22105 4242 aa0.56□□□□□ -2.32
AC055878.1-201ENST00000531858 LINC01546A6NGU7 62 aa0.56□□□□□ -2.32
AC055878.1-201ENST00000531858 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
AC055878.1-201ENST00000531858 BPTFQ12830 3046 aa0.55□□□□□ -2.32
AC055878.1-201ENST00000531858 CDC42BPAQ5VT25 1732 aa0.55□□□□□ -2.32
AC055878.1-201ENST00000531858 REV3LO60673 3130 aa0.54□□□□□ -2.32
AC055878.1-201ENST00000531858 DEFB106AQ8N104 65 aa0.54□□□□□ -2.32
AC055878.1-201ENST00000531858 TIMM8BQ9Y5J9 83 aaPredicted RBP0.54□□□□□ -2.32
AC055878.1-201ENST00000531858 CHD6Q8TD26 2715 aa0.53□□□□□ -2.32
AC055878.1-201ENST00000531858 PTPN13Q12923 2485 aa0.53□□□□□ -2.32
AC055878.1-201ENST00000531858 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
AC055878.1-201ENST00000531858 EP300Q09472 2414 aaPredicted RBP0.53□□□□□ -2.33
AC055878.1-201ENST00000531858 ZFYVE26Q68DK2 2539 aa0.53□□□□□ -2.33
AC055878.1-201ENST00000531858 ABCA2Q9BZC7 2435 aa0.52□□□□□ -2.33
AC055878.1-201ENST00000531858 SMIM27A0A1W2PRY6 76 aa0.52□□□□□ -2.33
AC055878.1-201ENST00000531858 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
AC055878.1-201ENST00000531858 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
AC055878.1-201ENST00000531858 SPRR2BP35325 72 aa0.51□□□□□ -2.33
AC055878.1-201ENST00000531858 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
AC055878.1-201ENST00000531858 KNL1Q8NG31 2342 aa0.5□□□□□ -2.33
AC055878.1-201ENST00000531858 OTOGQ6ZRI0 2925 aa0.5□□□□□ -2.33
AC055878.1-201ENST00000531858 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
AC055878.1-201ENST00000531858 C9orf92A6NGG3 77 aa0.49□□□□□ -2.33
AC055878.1-201ENST00000531858 ABRACLQ9P1F3 81 aa0.49□□□□□ -2.33
AC055878.1-201ENST00000531858 SPTA1P02549 2419 aa0.49□□□□□ -2.33
AC055878.1-201ENST00000531858 CSPG4Q6UVK1 2322 aa0.49□□□□□ -2.33
AC055878.1-201ENST00000531858 ATRQ13535 2644 aa0.48□□□□□ -2.33
AC055878.1-201ENST00000531858 NOP10Q9NPE3 64 aaKnown RBP0.48□□□□□ -2.33
AC055878.1-201ENST00000531858 FAT2Q9NYQ8 4349 aa0.46□□□□□ -2.34
AC055878.1-201ENST00000531858 ANKRD36CQ5JPF3 1778 aa0.46□□□□□ -2.34
AC055878.1-201ENST00000531858 PDE4DIPQ5VU43 2346 aa0.46□□□□□ -2.34
AC055878.1-201ENST00000531858 KIF21BO75037 1637 aa0.46□□□□□ -2.34
AC055878.1-201ENST00000531858 IQGAP2Q13576 1575 aa0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 HIVEP3Q5T1R4 2406 aa0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 AHNAKQ09666 5890 aaKnown RBP0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 CHD8Q9HCK8 2581 aa0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 LMO7Q8WWI1 1683 aa0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 ALMS1Q8TCU4 4167 aa0.45□□□□□ -2.34
AC055878.1-201ENST00000531858 LPAP08519 4548 aa0.44□□□□□ -2.34
AC055878.1-201ENST00000531858 NCOR1O75376 2440 aa0.44□□□□□ -2.34
AC055878.1-201ENST00000531858 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
AC055878.1-201ENST00000531858 IGLV5-48A0A075B6I7 105 aa0.44□□□□□ -2.34
AC055878.1-201ENST00000531858 TOMM5Q8N4H5 51 aa0.44□□□□□ -2.34
AC055878.1-201ENST00000531858 PRKDCP78527 4128 aaKnown RBP0.43□□□□□ -2.34
AC055878.1-201ENST00000531858 TRANK1O15050 2925 aa0.43□□□□□ -2.34
AC055878.1-201ENST00000531858 SMIM2Q9BVW6 85 aa0.42□□□□□ -2.34
AC055878.1-201ENST00000531858 NCOR2Q9Y618 2525 aa0.42□□□□□ -2.34
AC055878.1-201ENST00000531858 IGF2RP11717 2491 aa0.42□□□□□ -2.34
AC055878.1-201ENST00000531858 BSNQ9UPA5 3926 aa0.42□□□□□ -2.34
AC055878.1-201ENST00000531858 TENM3Q9P273 2699 aa0.41□□□□□ -2.34
AC055878.1-201ENST00000531858 CACNA1AO00555 2505 aa0.4□□□□□ -2.35
AC055878.1-201ENST00000531858 MUC5BQ9HC84 5762 aaPredicted RBP0.39□□□□□ -2.35
AC055878.1-201ENST00000531858 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
AC055878.1-201ENST00000531858 PKD1L1Q8TDX9 2849 aa0.38□□□□□ -2.35
AC055878.1-201ENST00000531858 HRNRQ86YZ3 2850 aaPredicted RBP0.38□□□□□ -2.35
AC055878.1-201ENST00000531858 TRPM2O94759 1503 aa0.38□□□□□ -2.35
AC055878.1-201ENST00000531858 DSPP15924 2871 aaKnown RBP0.37□□□□□ -2.35
AC055878.1-201ENST00000531858 NAV2Q8IVL1 2488 aa0.37□□□□□ -2.35
AC055878.1-201ENST00000531858 KAAG1Q9UBP8 84 aa0.37□□□□□ -2.35
AC055878.1-201ENST00000531858 PCNX1Q96RV3 2341 aa0.37□□□□□ -2.35
AC055878.1-201ENST00000531858 IQGAP1P46940 1657 aa0.37□□□□□ -2.35
AC055878.1-201ENST00000531858 FAM208AQ9UK61 1670 aaKnown RBP0.37□□□□□ -2.35
AC055878.1-201ENST00000531858 SPRR2AP35326 72 aa0.36□□□□□ -2.35
AC055878.1-201ENST00000531858 DEFB131AP59861 70 aa0.36□□□□□ -2.35
AC055878.1-201ENST00000531858 WFDC10BQ8IUB3 73 aa0.36□□□□□ -2.35
AC055878.1-201ENST00000531858 A0A1B0GUL6 1792 aa0.36□□□□□ -2.35
AC055878.1-201ENST00000531858 FAT4Q6V0I7 4981 aa0.35□□□□□ -2.35
AC055878.1-201ENST00000531858 AKAP13Q12802 2813 aa0.35□□□□□ -2.35
AC055878.1-201ENST00000531858 H3BNG1 76 aa0.35□□□□□ -2.35
AC055878.1-201ENST00000531858 TFF3Q07654 80 aa0.35□□□□□ -2.35
AC055878.1-201ENST00000531858 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.35
AC055878.1-201ENST00000531858 MMP24-AS1A0A0U1RRL7 71 aa0.34□□□□□ -2.36
AC055878.1-201ENST00000531858 KMT2AQ03164 3969 aa0.33□□□□□ -2.36
AC055878.1-201ENST00000531858 ACANP16112 2415 aa0.33□□□□□ -2.36
AC055878.1-201ENST00000531858 A8MTW9 85 aa0.33□□□□□ -2.36
AC055878.1-201ENST00000531858 CREBBPQ92793 2442 aa0.32□□□□□ -2.36
AC055878.1-201ENST00000531858 M0QY20 66 aa0.32□□□□□ -2.36
AC055878.1-201ENST00000531858 ATP7AQ04656 1500 aa0.32□□□□□ -2.36
AC055878.1-201ENST00000531858 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
AC055878.1-201ENST00000531858 NFAT5O94916 1531 aa0.31□□□□□ -2.36
AC055878.1-201ENST00000531858 UBR5O95071 2799 aaPredicted RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms