RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 RAPGEF2Q9Y4G8 1499 aa-1.28□□□□□ -2.61
RC3H1-206ENST00000531594 SERP2Q8N6R1 65 aa-1.28□□□□□ -2.61
RC3H1-206ENST00000531594 SPTAN1Q13813 2472 aaKnown RBP-1.28□□□□□ -2.61
RC3H1-206ENST00000531594 CSMD2Q7Z408 3487 aa-1.28□□□□□ -2.62
RC3H1-206ENST00000531594 C5P01031 1676 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 NRKQ7Z2Y5 1582 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 ABCC2Q92887 1545 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 TRRAPQ9Y4A5 3859 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 IQCF6A8MYZ5 107 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 DEFB4AO15263 64 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 TNP1P09430 55 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 MRPS10P82664 201 aaKnown RBP-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 COL5A1-AS1Q5SY13 56 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 UBR3Q6ZT12 1888 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 FREM2Q5SZK8 3169 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 PRUNE2Q8WUY3 3088 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 CC2D2AQ9P2K1 1620 aa-1.29□□□□□ -2.62
RC3H1-206ENST00000531594 LRRC9Q6ZRR7 1453 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 NRXN1Q9ULB1 1477 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 KIF20BQ96Q89 1820 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 UQCRHLA0A096LP55 91 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 A0A1B0GUT8 65 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 ATOX1O00244 68 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 FAUP35544 74 aaKnown RBP-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 C4AP0C0L4 1744 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 C4BP0C0L5 1744 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 PREX1Q8TCU6 1659 aa-1.3□□□□□ -2.62
RC3H1-206ENST00000531594 RGPD2P0DJD1 1756 aa-1.31□□□□□ -2.62
RC3H1-206ENST00000531594 SPHKAPQ2M3C7 1700 aa-1.31□□□□□ -2.62
RC3H1-206ENST00000531594 MT-ATP8P03928 68 aa-1.31□□□□□ -2.62
RC3H1-206ENST00000531594 RPS29P62273 56 aaKnown RBP-1.31□□□□□ -2.62
RC3H1-206ENST00000531594 WFDC9Q8NEX5 89 aa-1.31□□□□□ -2.62
RC3H1-206ENST00000531594 MGAQ8IWI9 3026 aa-1.32□□□□□ -2.62
RC3H1-206ENST00000531594 MMP24-AS1A0A0U1RRL7 71 aa-1.32□□□□□ -2.62
RC3H1-206ENST00000531594 ANKRD36BQ8N2N9 1353 aa-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 RGPD8O14715 1765 aaPredicted RBP-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 RGPD5Q99666 1765 aa-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 PRDM15P57071 1507 aaPredicted RBP-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 C20orf202A1L168 122 aa-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 DEFB106AQ8N104 65 aa-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 NALCNQ8IZF0 1738 aa-1.33□□□□□ -2.62
RC3H1-206ENST00000531594 LRRC7Q96NW7 1537 aa-1.34□□□□□ -2.62
RC3H1-206ENST00000531594 CHD1O14646 1710 aa-1.34□□□□□ -2.62
RC3H1-206ENST00000531594 IFI6P09912 130 aa-1.34□□□□□ -2.62
RC3H1-206ENST00000531594 SCN11AQ9UI33 1791 aa-1.34□□□□□ -2.62
RC3H1-206ENST00000531594 TRAV21A0A0B4J279 112 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 EFCAB10A6NFE3 127 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 LINC01546A6NGU7 62 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 CYB5AP00167 134 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 DEFB130BP0DP73 79 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 DEFB130AP0DP74 79 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 S100A10P60903 97 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 PLGLAQ15195 96 aa-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.35□□□□□ -2.63
RC3H1-206ENST00000531594 SPTBN5Q9NRC6 3674 aaKnown RBP-1.36□□□□□ -2.63
RC3H1-206ENST00000531594 TIAM2Q8IVF5 1701 aa-1.36□□□□□ -2.63
RC3H1-206ENST00000531594 C2orf88Q9BSF0 95 aa-1.36□□□□□ -2.63
RC3H1-206ENST00000531594 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.36□□□□□ -2.63
RC3H1-206ENST00000531594 QSER1Q2KHR3 1735 aa-1.37□□□□□ -2.63
RC3H1-206ENST00000531594 CRYBG1Q9Y4K1 1723 aa-1.37□□□□□ -2.63
RC3H1-206ENST00000531594 SPEGQ15772 3267 aa-1.37□□□□□ -2.63
RC3H1-206ENST00000531594 CENPEQ02224 2701 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 PLXNC1O60486 1568 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 HMGN2P05204 90 aaKnown RBP-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 ACYP1P07311 99 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 LINC00032P0C843 101 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 IAPPP10997 89 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 SMIM11AP58511 58 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 ABCA3Q99758 1704 aa-1.38□□□□□ -2.63
RC3H1-206ENST00000531594 USP32Q8NFA0 1604 aa-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 PKD1L3Q7Z443 1732 aa-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 UNC13AQ9UPW8 1703 aa-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 LINC00587B1AMM8 73 aa-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 SARNPP82979 210 aaKnown RBP-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 PEA15Q15121 130 aa-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.39□□□□□ -2.63
RC3H1-206ENST00000531594 LYNX1G3V0Z9 82 aa-1.4□□□□□ -2.63
RC3H1-206ENST00000531594 DPY30Q9C005 99 aa-1.4□□□□□ -2.63
RC3H1-206ENST00000531594 ATP7BP35670 1465 aa-1.4□□□□□ -2.63
RC3H1-206ENST00000531594 EIF4G3O43432 1585 aaKnown RBP-1.41□□□□□ -2.63
RC3H1-206ENST00000531594 IGLV5-48A0A075B6I7 105 aa-1.41□□□□□ -2.64
RC3H1-206ENST00000531594 MAGI3Q5TCQ9 1506 aa-1.41□□□□□ -2.64
RC3H1-206ENST00000531594 PLIN4Q96Q06 1357 aa-1.42□□□□□ -2.64
RC3H1-206ENST00000531594 RGPD1P0DJD0 1748 aa-1.42□□□□□ -2.64
RC3H1-206ENST00000531594 DEFB136Q30KP8 78 aa-1.42□□□□□ -2.64
RC3H1-206ENST00000531594 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.42□□□□□ -2.64
RC3H1-206ENST00000531594 WIZO95785 1651 aa-1.43□□□□□ -2.64
RC3H1-206ENST00000531594 CRYBG3Q68DQ2 2970 aa-1.43□□□□□ -2.64
RC3H1-206ENST00000531594 DEPDC5O75140 1603 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 ZFYVE16Q7Z3T8 1539 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 ZNF831Q5JPB2 1677 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 WDFY3Q8IZQ1 3526 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 NDUFB1O75438 58 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 S100PP25815 95 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 CEP350Q5VT06 3117 aa-1.44□□□□□ -2.64
RC3H1-206ENST00000531594 NEXMIFQ5QGS0 1516 aa-1.45□□□□□ -2.64
RC3H1-206ENST00000531594 TOGARAM1Q9Y4F4 1720 aa-1.45□□□□□ -2.64
RC3H1-206ENST00000531594 NWD1Q149M9 1564 aa-1.45□□□□□ -2.64
RC3H1-206ENST00000531594 MAST1Q9Y2H9 1570 aa-1.45□□□□□ -2.64
RC3H1-206ENST00000531594 MYMXA0A1B0GTQ4 84 aa-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms