RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
LRRK1-207ENST00000531270 A0A0C4DFX4 3053 aa8.86□□□□□ -0.99
LRRK1-207ENST00000531270 Q5VV11 94 aa8.85□□□□□ -0.99
LRRK1-207ENST00000531270 Q8NDZ9 215 aa8.84□□□□□ -1
LRRK1-207ENST00000531270 DNAH14Q0VDD8 3507 aa8.83□□□□□ -1
LRRK1-207ENST00000531270 ADM2Q7Z4H4 148 aa8.83□□□□□ -1
LRRK1-207ENST00000531270 CHD7Q9P2D1 2997 aa8.82□□□□□ -1
LRRK1-207ENST00000531270 UNC80Q8N2C7 3258 aa8.82□□□□□ -1
LRRK1-207ENST00000531270 USP24Q9UPU5 2620 aa8.81□□□□□ -1
LRRK1-207ENST00000531270 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
LRRK1-207ENST00000531270 Q5XG85 94 aa8.8□□□□□ -1
LRRK1-207ENST00000531270 CDH23Q9H251 3354 aa8.79□□□□□ -1
LRRK1-207ENST00000531270 MGAM2Q2M2H8 2515 aa8.79□□□□□ -1
LRRK1-207ENST00000531270 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
LRRK1-207ENST00000531270 HTTP42858 3142 aa8.79□□□□□ -1
LRRK1-207ENST00000531270 FP248Q71RG6 208 aaPredicted RBP8.78□□□□□ -1
LRRK1-207ENST00000531270 CYSTM1Q9H1C7 97 aa8.78□□□□□ -1
LRRK1-207ENST00000531270 PRRC2CQ9Y520 2896 aaKnown RBP8.77□□□□□ -1.01
LRRK1-207ENST00000531270 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
LRRK1-207ENST00000531270 SPRR1AP35321 89 aa8.75□□□□□ -1.01
LRRK1-207ENST00000531270 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
LRRK1-207ENST00000531270 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
LRRK1-207ENST00000531270 KRTAP26-1Q6PEX3 210 aa8.72□□□□□ -1.01
LRRK1-207ENST00000531270 CFAP54Q96N23 3096 aa8.72□□□□□ -1.01
LRRK1-207ENST00000531270 KRTAP1-5Q9BYS1 174 aa8.72□□□□□ -1.01
LRRK1-207ENST00000531270 SZT2Q5T011 3432 aa8.7□□□□□ -1.02
LRRK1-207ENST00000531270 RANBP2P49792 3224 aaKnown RBP8.69□□□□□ -1.02
LRRK1-207ENST00000531270 SPRR1BP22528 89 aa8.68□□□□□ -1.02
LRRK1-207ENST00000531270 LCE6AA0A183 80 aa8.67□□□□□ -1.02
LRRK1-207ENST00000531270 Q6ZR54 194 aa8.66□□□□□ -1.02
LRRK1-207ENST00000531270 CELSR3Q9NYQ7 3312 aa8.65□□□□□ -1.02
LRRK1-207ENST00000531270 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.02
LRRK1-207ENST00000531270 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
LRRK1-207ENST00000531270 HECTD1Q9ULT8 2610 aa8.63□□□□□ -1.03
LRRK1-207ENST00000531270 PRUNE2Q8WUY3 3088 aa8.63□□□□□ -1.03
LRRK1-207ENST00000531270 OXTP01178 125 aa8.6□□□□□ -1.03
LRRK1-207ENST00000531270 FLG2Q5D862 2391 aaPredicted RBP8.59□□□□□ -1.03
LRRK1-207ENST00000531270 TRIOO75962 3097 aa8.58□□□□□ -1.04
LRRK1-207ENST00000531270 PANO1I0J062 215 aa8.56□□□□□ -1.04
LRRK1-207ENST00000531270 FLNBO75369 2602 aaKnown RBP8.54□□□□□ -1.04
LRRK1-207ENST00000531270 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
LRRK1-207ENST00000531270 A0A087X002 238 aa8.52□□□□□ -1.05
LRRK1-207ENST00000531270 CHD9Q3L8U1 2897 aa8.51□□□□□ -1.05
LRRK1-207ENST00000531270 A8MU10 97 aa8.5□□□□□ -1.05
LRRK1-207ENST00000531270 ATRQ13535 2644 aa8.5□□□□□ -1.05
LRRK1-207ENST00000531270 VCANP13611 3396 aa8.49□□□□□ -1.05
LRRK1-207ENST00000531270 A8MUU9 505 aa8.48□□□□□ -1.05
LRRK1-207ENST00000531270 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
LRRK1-207ENST00000531270 FREM2Q5SZK8 3169 aa8.42□□□□□ -1.06
LRRK1-207ENST00000531270 VPS13AQ96RL7 3174 aa8.42□□□□□ -1.06
LRRK1-207ENST00000531270 MAST4O15021 2626 aa8.39□□□□□ -1.07
LRRK1-207ENST00000531270 WDFY4Q6ZS81 3184 aa8.37□□□□□ -1.07
LRRK1-207ENST00000531270 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
LRRK1-207ENST00000531270 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
LRRK1-207ENST00000531270 SPEGQ15772 3267 aa8.36□□□□□ -1.07
LRRK1-207ENST00000531270 SPTBN5Q9NRC6 3674 aaKnown RBP8.34□□□□□ -1.07
LRRK1-207ENST00000531270 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
LRRK1-207ENST00000531270 NDUFAF8A1L188 74 aa8.33□□□□□ -1.08
LRRK1-207ENST00000531270 FLNAP21333 2647 aaKnown RBP8.33□□□□□ -1.08
LRRK1-207ENST00000531270 KRTAP4-16G5E9R7 235 aaPredicted RBP8.32□□□□□ -1.08
LRRK1-207ENST00000531270 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
LRRK1-207ENST00000531270 MYO15AQ9UKN7 3530 aa8.31□□□□□ -1.08
LRRK1-207ENST00000531270 LAMA1P25391 3075 aa8.31□□□□□ -1.08
LRRK1-207ENST00000531270 MGAQ8IWI9 3026 aa8.31□□□□□ -1.08
LRRK1-207ENST00000531270 COL6A3P12111 3177 aa8.3□□□□□ -1.08
LRRK1-207ENST00000531270 STAB1Q9NY15 2570 aa8.29□□□□□ -1.08
LRRK1-207ENST00000531270 ITPR3Q14573 2671 aa8.28□□□□□ -1.08
LRRK1-207ENST00000531270 USP34Q70CQ2 3546 aa8.28□□□□□ -1.08
LRRK1-207ENST00000531270 TNP1P09430 55 aa8.27□□□□□ -1.09
LRRK1-207ENST00000531270 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
LRRK1-207ENST00000531270 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
LRRK1-207ENST00000531270 TRANK1O15050 2925 aa8.22□□□□□ -1.09
LRRK1-207ENST00000531270 A6NN06 94 aa8.18□□□□□ -1.1
LRRK1-207ENST00000531270 EYSQ5T1H1 3165 aa8.17□□□□□ -1.1
LRRK1-207ENST00000531270 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
LRRK1-207ENST00000531270 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
LRRK1-207ENST00000531270 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
LRRK1-207ENST00000531270 CFAP46Q8IYW2 2715 aa8.15□□□□□ -1.1
LRRK1-207ENST00000531270 HELZ2Q9BYK8 2649 aaKnown RBP8.14□□□□□ -1.11
LRRK1-207ENST00000531270 FRYQ5TBA9 3013 aa8.14□□□□□ -1.11
LRRK1-207ENST00000531270 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
LRRK1-207ENST00000531270 A0A1B0GVY2 172 aa8.12□□□□□ -1.11
LRRK1-207ENST00000531270 STAB2Q8WWQ8 2551 aa8.08□□□□□ -1.12
LRRK1-207ENST00000531270 REV3LO60673 3130 aa8.08□□□□□ -1.12
LRRK1-207ENST00000531270 FRYLO94915 3013 aa8.08□□□□□ -1.12
LRRK1-207ENST00000531270 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
LRRK1-207ENST00000531270 AKAP13Q12802 2813 aa8.06□□□□□ -1.12
LRRK1-207ENST00000531270 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
LRRK1-207ENST00000531270 CFAP47Q6ZTR5 3102 aa8.03□□□□□ -1.12
LRRK1-207ENST00000531270 DSPP15924 2871 aaKnown RBP8.01□□□□□ -1.13
LRRK1-207ENST00000531270 BOD1L1Q8NFC6 3051 aa8.01□□□□□ -1.13
LRRK1-207ENST00000531270 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
LRRK1-207ENST00000531270 KALRNO60229 2985 aa7.98□□□□□ -1.13
LRRK1-207ENST00000531270 CHD6Q8TD26 2715 aa7.98□□□□□ -1.13
LRRK1-207ENST00000531270 TEX15Q9BXT5 2789 aa7.98□□□□□ -1.13
LRRK1-207ENST00000531270 NBEAQ8NFP9 2946 aa7.94□□□□□ -1.14
LRRK1-207ENST00000531270 CENPEQ02224 2701 aa7.93□□□□□ -1.14
LRRK1-207ENST00000531270 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
LRRK1-207ENST00000531270 LRBAP50851 2863 aa7.91□□□□□ -1.14
LRRK1-207ENST00000531270 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms