RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MDFIQ99750 246 aa5.08□□□□□ -1.6
CSDE1-214ENST00000530886 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
CSDE1-214ENST00000530886 A0A087WSZ3 146 aa5.07□□□□□ -1.6
CSDE1-214ENST00000530886 RPL37AP61513 92 aaKnown RBP5.07□□□□□ -1.6
CSDE1-214ENST00000530886 KRTAP7-1Q8IUC3 87 aa5.07□□□□□ -1.6
CSDE1-214ENST00000530886 SPG11Q96JI7 2443 aa5.07□□□□□ -1.6
CSDE1-214ENST00000530886 ADM2Q7Z4H4 148 aa5.07□□□□□ -1.6
CSDE1-214ENST00000530886 FBN1P35555 2871 aaKnown RBP5.07□□□□□ -1.6
CSDE1-214ENST00000530886 USP9YO00507 2555 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-214ENST00000530886 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
CSDE1-214ENST00000530886 KRTAP1-3Q8IUG1 177 aa5.06□□□□□ -1.6
CSDE1-214ENST00000530886 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
CSDE1-214ENST00000530886 LRRK2Q5S007 2527 aa5.05□□□□□ -1.6
CSDE1-214ENST00000530886 IGSF10Q6WRI0 2623 aa5.05□□□□□ -1.6
CSDE1-214ENST00000530886 MUC6Q6W4X9 2439 aa5.05□□□□□ -1.6
CSDE1-214ENST00000530886 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
CSDE1-214ENST00000530886 PDZD2O15018 2839 aa5.04□□□□□ -1.6
CSDE1-214ENST00000530886 CHD8Q9HCK8 2581 aa5.04□□□□□ -1.6
CSDE1-214ENST00000530886 ZFYVE26Q68DK2 2539 aa5.04□□□□□ -1.6
CSDE1-214ENST00000530886 ITPR3Q14573 2671 aa5.03□□□□□ -1.6
CSDE1-214ENST00000530886 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
CSDE1-214ENST00000530886 RETNLBQ9BQ08 111 aa5.02□□□□□ -1.61
CSDE1-214ENST00000530886 POLQO75417 2590 aa5.02□□□□□ -1.61
CSDE1-214ENST00000530886 H3BNG1 76 aa5.02□□□□□ -1.61
CSDE1-214ENST00000530886 SPRR1BP22528 89 aa5.01□□□□□ -1.61
CSDE1-214ENST00000530886 REG3GQ6UW15 175 aa5.01□□□□□ -1.61
CSDE1-214ENST00000530886 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
CSDE1-214ENST00000530886 DNAH7Q8WXX0 4024 aa5.01□□□□□ -1.61
CSDE1-214ENST00000530886 FN1P02751 2386 aaKnown RBP5.01□□□□□ -1.61
CSDE1-214ENST00000530886 A0A0G2JQZ4 141 aa5□□□□□ -1.61
CSDE1-214ENST00000530886 A0A1W2PNN7 141 aa5□□□□□ -1.61
CSDE1-214ENST00000530886 SPART-AS1P0CW21 52 aa4.99□□□□□ -1.61
CSDE1-214ENST00000530886 FAM168BA1KXE4 195 aa4.98□□□□□ -1.61
CSDE1-214ENST00000530886 DYNC2H1Q8NCM8 4307 aaKnown RBP4.98□□□□□ -1.61
CSDE1-214ENST00000530886 H0Y9J4 135 aa4.98□□□□□ -1.61
CSDE1-214ENST00000530886 TENM1Q9UKZ4 2725 aa4.98□□□□□ -1.61
CSDE1-214ENST00000530886 KRTAP10-3P60369 221 aa4.98□□□□□ -1.61
CSDE1-214ENST00000530886 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
CSDE1-214ENST00000530886 DNAH8Q96JB1 4490 aa4.96□□□□□ -1.62
CSDE1-214ENST00000530886 LINC01556Q5JQF7 62 aa4.96□□□□□ -1.62
CSDE1-214ENST00000530886 NAV2Q8IVL1 2488 aa4.96□□□□□ -1.62
CSDE1-214ENST00000530886 ACYP2P14621 99 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 KRTAP10-9P60411 292 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 DEFB4AO15263 64 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 Q96NJ1 140 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 SPTBN4Q9H254 2564 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 TENM4Q6N022 2769 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
CSDE1-214ENST00000530886 DEFB135Q30KP9 77 aa4.94□□□□□ -1.62
CSDE1-214ENST00000530886 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
CSDE1-214ENST00000530886 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
CSDE1-214ENST00000530886 VPS13DQ5THJ4 4388 aa4.93□□□□□ -1.62
CSDE1-214ENST00000530886 A0A1B0GU69 56 aa4.93□□□□□ -1.62
CSDE1-214ENST00000530886 UQCR11O14957 56 aa4.93□□□□□ -1.62
CSDE1-214ENST00000530886 PKD1L2Q7Z442 2459 aa4.93□□□□□ -1.62
CSDE1-214ENST00000530886 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
CSDE1-214ENST00000530886 HUWE1Q7Z6Z7 4374 aaKnown RBP4.92□□□□□ -1.62
CSDE1-214ENST00000530886 KRTAP13-3Q3SY46 172 aa4.92□□□□□ -1.62
CSDE1-214ENST00000530886 HTN3P15516 51 aa4.92□□□□□ -1.62
CSDE1-214ENST00000530886 FLNAP21333 2647 aaKnown RBP4.92□□□□□ -1.62
CSDE1-214ENST00000530886 UNC79Q9P2D8 2635 aa4.91□□□□□ -1.62
CSDE1-214ENST00000530886 SETD2Q9BYW2 2564 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-214ENST00000530886 ZNF861PO60384 105 aa4.91□□□□□ -1.62
CSDE1-214ENST00000530886 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
CSDE1-214ENST00000530886 CACNA1AO00555 2505 aa4.9□□□□□ -1.63
CSDE1-214ENST00000530886 A0A1B0GVX0 72 aa4.89□□□□□ -1.63
CSDE1-214ENST00000530886 DEFB113Q30KQ7 82 aa4.89□□□□□ -1.63
CSDE1-214ENST00000530886 TENM3Q9P273 2699 aa4.89□□□□□ -1.63
CSDE1-214ENST00000530886 ABCA12Q86UK0 2595 aa4.89□□□□□ -1.63
CSDE1-214ENST00000530886 DNAH10OSP0CZ25 163 aa4.89□□□□□ -1.63
CSDE1-214ENST00000530886 PRLHP81277 87 aa4.89□□□□□ -1.63
CSDE1-214ENST00000530886 PRKDCP78527 4128 aaKnown RBP4.88□□□□□ -1.63
CSDE1-214ENST00000530886 ROMO1P60602 79 aa4.88□□□□□ -1.63
CSDE1-214ENST00000530886 C1orf134Q5TEV5 83 aa4.88□□□□□ -1.63
CSDE1-214ENST00000530886 MYO18BQ8IUG5 2567 aa4.87□□□□□ -1.63
CSDE1-214ENST00000530886 COL7A1Q02388 2944 aa4.86□□□□□ -1.63
CSDE1-214ENST00000530886 DNAH6Q9C0G6 4158 aa4.86□□□□□ -1.63
CSDE1-214ENST00000530886 ZNF706Q9Y5V0 76 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-214ENST00000530886 SONP18583 2426 aaKnown RBP4.85□□□□□ -1.63
CSDE1-214ENST00000530886 CCDC168Q8NDH2 2452 aa4.85□□□□□ -1.63
CSDE1-214ENST00000530886 PIEZO1Q92508 2521 aa4.85□□□□□ -1.63
CSDE1-214ENST00000530886 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
CSDE1-214ENST00000530886 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
CSDE1-214ENST00000530886 CASC10Q5T4H9 136 aa4.84□□□□□ -1.63
CSDE1-214ENST00000530886 DNAH17Q9UFH2 4485 aa4.84□□□□□ -1.64
CSDE1-214ENST00000530886 HIVEP2P31629 2446 aa4.83□□□□□ -1.64
CSDE1-214ENST00000530886 KRTAP11-1Q8IUC1 163 aa4.83□□□□□ -1.64
CSDE1-214ENST00000530886 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
CSDE1-214ENST00000530886 Q5W150 140 aa4.81□□□□□ -1.64
CSDE1-214ENST00000530886 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
CSDE1-214ENST00000530886 BAHCC1Q9P281 2608 aa4.81□□□□□ -1.64
CSDE1-214ENST00000530886 IGLV7-43P04211 117 aa4.81□□□□□ -1.64
CSDE1-214ENST00000530886 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
CSDE1-214ENST00000530886 K7EIL1 84 aa4.79□□□□□ -1.64
CSDE1-214ENST00000530886 CHTF8P0CG12 524 aa4.79□□□□□ -1.64
CSDE1-214ENST00000530886 A0A096LNI7 61 aa4.79□□□□□ -1.64
CSDE1-214ENST00000530886 CDK2AP2O75956 126 aa4.79□□□□□ -1.64
CSDE1-214ENST00000530886 A8MUU9 505 aa4.78□□□□□ -1.64
CSDE1-214ENST00000530886 LINC00483Q53H64 154 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms