RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 ALMS1Q8TCU4 4167 aa2.53□□□□□ -2.01
PTPRC-214ENST00000530727 NUPR2A6NF83 97 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 H3BMG7 143 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 FXYD2P54710 66 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 Q8IZM0 81 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 HYDINQ4G0P3 5121 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 H3BT86 120 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 IGLV7-43P04211 117 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 KRTAP13-3Q3SY46 172 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 COL5A1-AS1Q5SY13 56 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 SOSTDC1Q6X4U4 206 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 PHF5AQ7RTV0 110 aaKnown RBP2.52□□□□□ -2.01
PTPRC-214ENST00000530727 MUC7Q8TAX7 377 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 SPANXDQ9BXN6 97 aa2.52□□□□□ -2.01
PTPRC-214ENST00000530727 DNAH11Q96DT5 4516 aa2.51□□□□□ -2.01
PTPRC-214ENST00000530727 CRPP02741 224 aa2.51□□□□□ -2.01
PTPRC-214ENST00000530727 RPL28P46779 137 aaKnown RBP2.51□□□□□ -2.01
PTPRC-214ENST00000530727 FAT2Q9NYQ8 4349 aa2.51□□□□□ -2.01
PTPRC-214ENST00000530727 LOC107984156A0A0G2JMH3 177 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 FAM236AA0A1B0GUQ0 79 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 FAM236BA0A1B0GV22 79 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 SFTA2Q6UW10 78 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 MUSTN1Q8IVN3 82 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 ARL17AQ8IVW1 177 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 C1orf64Q8NEQ6 169 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 GVQW2A0A096LPI5 108 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-214ENST00000530727 C16orf90A8MZG2 172 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 SMIM13P0DJ93 91 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 IFITM1P13164 125 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 LINC00308Q8TCZ7 52 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 TOMM7Q9P0U1 55 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 PKD1P98161 4303 aa2.5□□□□□ -2.01
PTPRC-214ENST00000530727 IGKV2D-24A0A075B6R9 120 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 SPAG11BQ08648 103 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 CIRBPQ14011 172 aaKnown RBP2.49□□□□□ -2.01
PTPRC-214ENST00000530727 COX17Q14061 63 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 UNQ6190/PRO20217Q6UXQ8 127 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 Q6ZRN7 208 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-214ENST00000530727 ST20-AS1Q8NBB2 130 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 LINC00526Q96FQ7 95 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 PRO0461Q9UI25 63 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 NBDYA0A0U1RRE5 68 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-214ENST00000530727 NHP2Q9NX24 153 aaKnown RBP2.49□□□□□ -2.01
PTPRC-214ENST00000530727 C6orf48Q9UBA6 75 aa2.49□□□□□ -2.01
PTPRC-214ENST00000530727 DNAH5Q8TE73 4624 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 WFDC2Q14508 124 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 MEIG1Q5JSS6 88 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 C7orf65Q6ZTY9 151 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 Q8NDZ9 215 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 DNAH8Q96JB1 4490 aa2.48□□□□□ -2.01
PTPRC-214ENST00000530727 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
PTPRC-214ENST00000530727 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-214ENST00000530727 TRBV30A0A0K0K1B3 111 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 LRCOL1A6NCL2 159 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 LINC00158P58513 81 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 UBE2DNLQ8IWF7 75 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 PRO1854Q9UHT4 67 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 TCL1BO95988 128 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 NPC2P61916 151 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 RAB37Q96AX2 223 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 LINC00167Q96N53 147 aa2.47□□□□□ -2.01
PTPRC-214ENST00000530727 A0A1W2PPM0 123 aa2.46□□□□□ -2.02
PTPRC-214ENST00000530727 H3BPC8 53 aa2.46□□□□□ -2.02
PTPRC-214ENST00000530727 H3BUT2 72 aa2.46□□□□□ -2.02
PTPRC-214ENST00000530727 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
PTPRC-214ENST00000530727 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
PTPRC-214ENST00000530727 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
PTPRC-214ENST00000530727 CRYGAP11844 174 aa2.45□□□□□ -2.02
PTPRC-214ENST00000530727 DIRC1Q969H9 104 aa2.45□□□□□ -2.02
PTPRC-214ENST00000530727 RYR2Q92736 4967 aa2.45□□□□□ -2.02
PTPRC-214ENST00000530727 UQCRQO14949 82 aa2.45□□□□□ -2.02
PTPRC-214ENST00000530727 TRAV7A0A075B6U4 112 aa2.44□□□□□ -2.02
PTPRC-214ENST00000530727 M0R2N4 97 aa2.44□□□□□ -2.02
PTPRC-214ENST00000530727 TRAV13-2A0A0B4J235 113 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 TRBV10-2A0A0K0K1G8 114 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 K7EP34 96 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 RTL8CO15255 209 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 IGLV6-57P01721 117 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 TEN1Q86WV5 123 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 SRRM2Q9UQ35 2752 aaKnown RBP2.43□□□□□ -2.02
PTPRC-214ENST00000530727 A0A087WTM6 91 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 A0A1B0GU33 70 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 CCDC179H3BU77 68 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 PSCAO43653 123 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 LY6G6CO95867 125 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 Q8N814 137 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 C9orf163Q8N9P6 203 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 SMIM11BQ8TCY0 68 aa2.43□□□□□ -2.02
PTPRC-214ENST00000530727 RETNLBQ9BQ08 111 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms