RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
UBXN1-209ENST00000528907 SNHG12Q9BXW3 62 aa8.44□□□□□ -1.06
UBXN1-209ENST00000528907 LAMTOR3Q9UHA4 124 aa8.44□□□□□ -1.06
UBXN1-209ENST00000528907 DEFB105AQ8NG35 78 aa8.42□□□□□ -1.06
UBXN1-209ENST00000528907 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
UBXN1-209ENST00000528907 LST1O00453 97 aa8.41□□□□□ -1.06
UBXN1-209ENST00000528907 TAX1BP3O14907 124 aa8.41□□□□□ -1.06
UBXN1-209ENST00000528907 TRACP01848 142 aa8.41□□□□□ -1.06
UBXN1-209ENST00000528907 SCGB1C2P0DMR2 95 aa8.41□□□□□ -1.06
UBXN1-209ENST00000528907 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
UBXN1-209ENST00000528907 C9orf118A6NHY6 69 aa8.4□□□□□ -1.06
UBXN1-209ENST00000528907 H3BQ85 93 aa8.4□□□□□ -1.06
UBXN1-209ENST00000528907 Q8NBF4 154 aa8.4□□□□□ -1.06
UBXN1-209ENST00000528907 IGLV9-49A0A0B4J1Y8 123 aa8.39□□□□□ -1.07
UBXN1-209ENST00000528907 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
UBXN1-209ENST00000528907 DNAL4O96015 105 aa8.38□□□□□ -1.07
UBXN1-209ENST00000528907 MOBPQ13875 183 aa8.38□□□□□ -1.07
UBXN1-209ENST00000528907 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
UBXN1-209ENST00000528907 PCP4L1A6NKN8 68 aa8.37□□□□□ -1.07
UBXN1-209ENST00000528907 COL5A1-AS1Q5SY13 56 aa8.37□□□□□ -1.07
UBXN1-209ENST00000528907 LINC00304Q8N9R0 145 aa8.37□□□□□ -1.07
UBXN1-209ENST00000528907 IGLV8-61A0A075B6I0 122 aa8.36□□□□□ -1.07
UBXN1-209ENST00000528907 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
UBXN1-209ENST00000528907 H3BUT2 72 aa8.36□□□□□ -1.07
UBXN1-209ENST00000528907 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
UBXN1-209ENST00000528907 NAA38Q9BRA0 125 aaKnown RBP8.36□□□□□ -1.07
UBXN1-209ENST00000528907 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
UBXN1-209ENST00000528907 TCL1BO95988 128 aa8.35□□□□□ -1.07
UBXN1-209ENST00000528907 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
UBXN1-209ENST00000528907 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
UBXN1-209ENST00000528907 TMEM256-PLSCR3K7ERE1 68 aa8.34□□□□□ -1.07
UBXN1-209ENST00000528907 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
UBXN1-209ENST00000528907 F8WEM9 126 aa8.33□□□□□ -1.08
UBXN1-209ENST00000528907 SPINK1P00995 79 aa8.32□□□□□ -1.08
UBXN1-209ENST00000528907 NDUFV3P56181 108 aaKnown RBP8.31□□□□□ -1.08
UBXN1-209ENST00000528907 CD164Q04900 197 aa8.31□□□□□ -1.08
UBXN1-209ENST00000528907 UBE2V1Q13404 147 aa8.31□□□□□ -1.08
UBXN1-209ENST00000528907 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
UBXN1-209ENST00000528907 Q6JHZ5 121 aa8.31□□□□□ -1.08
UBXN1-209ENST00000528907 FABP2P12104 132 aa8.3□□□□□ -1.08
UBXN1-209ENST00000528907 LRP2P98164 4655 aa8.28□□□□□ -1.08
UBXN1-209ENST00000528907 BAALC-AS2P0C853 105 aa8.26□□□□□ -1.09
UBXN1-209ENST00000528907 H3BMG7 143 aa8.25□□□□□ -1.09
UBXN1-209ENST00000528907 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
UBXN1-209ENST00000528907 Q5XG85 94 aa8.24□□□□□ -1.09
UBXN1-209ENST00000528907 SPCS1Q9Y6A9 102 aa8.24□□□□□ -1.09
UBXN1-209ENST00000528907 Q6Q795 121 aa8.23□□□□□ -1.09
UBXN1-209ENST00000528907 C9JAW5 83 aa8.22□□□□□ -1.09
UBXN1-209ENST00000528907 ANKRD29Q8N6D5 301 aa8.22□□□□□ -1.09
UBXN1-209ENST00000528907 LIMD2Q9BT23 127 aa8.22□□□□□ -1.09
UBXN1-209ENST00000528907 H3BT86 120 aa8.21□□□□□ -1.1
UBXN1-209ENST00000528907 A0A0G2JQZ4 141 aa8.2□□□□□ -1.1
UBXN1-209ENST00000528907 JMJD7-PLA2G4BH0Y9G9 81 aa8.19□□□□□ -1.1
UBXN1-209ENST00000528907 K7EP34 96 aa8.19□□□□□ -1.1
UBXN1-209ENST00000528907 TRBV7-4A0A0J9YYF1 115 aa8.18□□□□□ -1.1
UBXN1-209ENST00000528907 TRBV7-7A0A0K0K1E9 115 aa8.18□□□□□ -1.1
UBXN1-209ENST00000528907 RBM3P98179 157 aaKnown RBP8.18□□□□□ -1.1
UBXN1-209ENST00000528907 HRCT1Q6UXD1 115 aa8.18□□□□□ -1.1
UBXN1-209ENST00000528907 TEN1Q86WV5 123 aa8.18□□□□□ -1.1
UBXN1-209ENST00000528907 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
UBXN1-209ENST00000528907 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
UBXN1-209ENST00000528907 OBSCN-AS1Q96MR7 158 aa8.16□□□□□ -1.1
UBXN1-209ENST00000528907 GTF2H5Q6ZYL4 71 aa8.15□□□□□ -1.1
UBXN1-209ENST00000528907 A0A1W2PNM2 257 aa8.14□□□□□ -1.11
UBXN1-209ENST00000528907 DSCR8Q96T75 97 aa8.14□□□□□ -1.11
UBXN1-209ENST00000528907 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
UBXN1-209ENST00000528907 LOC110117498A0A087WWA1 95 aa8.12□□□□□ -1.11
UBXN1-209ENST00000528907 PDE6GP18545 87 aa8.12□□□□□ -1.11
UBXN1-209ENST00000528907 C21orf62-AS1Q17RA5 79 aa8.12□□□□□ -1.11
UBXN1-209ENST00000528907 RETNLBQ9BQ08 111 aa8.12□□□□□ -1.11
UBXN1-209ENST00000528907 PRR4Q16378 134 aa8.11□□□□□ -1.11
UBXN1-209ENST00000528907 A0A1B0GV72 72 aa8.1□□□□□ -1.11
UBXN1-209ENST00000528907 CCKP06307 115 aa8.1□□□□□ -1.11
UBXN1-209ENST00000528907 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
UBXN1-209ENST00000528907 MTURNQ8N3F0 131 aa8.1□□□□□ -1.11
UBXN1-209ENST00000528907 SS18L2Q9UHA2 77 aa8.1□□□□□ -1.11
UBXN1-209ENST00000528907 A0A1B0GW54 56 aa8.09□□□□□ -1.11
UBXN1-209ENST00000528907 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
UBXN1-209ENST00000528907 Q6ZQT0 140 aa8.08□□□□□ -1.12
UBXN1-209ENST00000528907 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
UBXN1-209ENST00000528907 A0A087WSZ3 146 aa8.07□□□□□ -1.12
UBXN1-209ENST00000528907 F8W1H4 67 aa8.07□□□□□ -1.12
UBXN1-209ENST00000528907 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
UBXN1-209ENST00000528907 C14orf132Q9NPU4 83 aa8.05□□□□□ -1.12
UBXN1-209ENST00000528907 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.13
UBXN1-209ENST00000528907 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
UBXN1-209ENST00000528907 VPS25Q9BRG1 176 aa8.01□□□□□ -1.13
UBXN1-209ENST00000528907 Q96NJ1 140 aa8□□□□□ -1.13
UBXN1-209ENST00000528907 A0A1B0GV90 55 aa7.98□□□□□ -1.13
UBXN1-209ENST00000528907 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
UBXN1-209ENST00000528907 LPAP08519 4548 aa7.95□□□□□ -1.14
UBXN1-209ENST00000528907 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
UBXN1-209ENST00000528907 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
UBXN1-209ENST00000528907 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
UBXN1-209ENST00000528907 J3KT08 172 aa7.91□□□□□ -1.14
UBXN1-209ENST00000528907 IGKV4-1P06312 121 aa7.9□□□□□ -1.14
UBXN1-209ENST00000528907 XP32Q5T750 250 aa7.89□□□□□ -1.15
UBXN1-209ENST00000528907 NREPQ16612 68 aa7.88□□□□□ -1.15
UBXN1-209ENST00000528907 MUC2Q02817 5179 aa7.88□□□□□ -1.15
UBXN1-209ENST00000528907 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms