RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 OCIAD2Q56VL3 154 aa9.84□□□□□ -0.83
LMX1B-203ENST00000526117 FP248Q71RG6 208 aaPredicted RBP9.84□□□□□ -0.83
LMX1B-203ENST00000526117 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
LMX1B-203ENST00000526117 TRIAP1O43715 76 aa9.82□□□□□ -0.84
LMX1B-203ENST00000526117 IGLV8-61A0A075B6I0 122 aa9.81□□□□□ -0.84
LMX1B-203ENST00000526117 FAM218AQ96MZ4 157 aa9.81□□□□□ -0.84
LMX1B-203ENST00000526117 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
LMX1B-203ENST00000526117 K7ERJ3 54 aa9.79□□□□□ -0.84
LMX1B-203ENST00000526117 TPRXLQ17RH7 258 aa9.79□□□□□ -0.84
LMX1B-203ENST00000526117 F8WEM9 126 aa9.78□□□□□ -0.84
LMX1B-203ENST00000526117 GHRHP01286 108 aa9.78□□□□□ -0.84
LMX1B-203ENST00000526117 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
LMX1B-203ENST00000526117 LPAP08519 4548 aa9.78□□□□□ -0.84
LMX1B-203ENST00000526117 RNF213Q63HN8 5207 aa9.77□□□□□ -0.85
LMX1B-203ENST00000526117 M0R143 59 aa9.77□□□□□ -0.85
LMX1B-203ENST00000526117 Q5XG85 94 aa9.77□□□□□ -0.85
LMX1B-203ENST00000526117 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
LMX1B-203ENST00000526117 TSTD3H0UI37 97 aa9.76□□□□□ -0.85
LMX1B-203ENST00000526117 COX6CP09669 75 aa9.76□□□□□ -0.85
LMX1B-203ENST00000526117 Q6JHZ5 121 aa9.76□□□□□ -0.85
LMX1B-203ENST00000526117 PSMB2P49721 201 aa9.74□□□□□ -0.85
LMX1B-203ENST00000526117 H3BQ85 93 aa9.72□□□□□ -0.85
LMX1B-203ENST00000526117 SNHG12Q9BXW3 62 aa9.72□□□□□ -0.85
LMX1B-203ENST00000526117 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
LMX1B-203ENST00000526117 IGFL1Q6UW32 110 aa9.69□□□□□ -0.86
LMX1B-203ENST00000526117 HRCT1Q6UXD1 115 aa9.69□□□□□ -0.86
LMX1B-203ENST00000526117 DNAL4O96015 105 aa9.68□□□□□ -0.86
LMX1B-203ENST00000526117 TRACP01848 142 aa9.67□□□□□ -0.86
LMX1B-203ENST00000526117 NDUFV3P56181 108 aaKnown RBP9.67□□□□□ -0.86
LMX1B-203ENST00000526117 A0A0G2JQZ4 141 aa9.66□□□□□ -0.86
LMX1B-203ENST00000526117 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
LMX1B-203ENST00000526117 ORMDL1Q9P0S3 153 aa9.66□□□□□ -0.86
LMX1B-203ENST00000526117 LST1O00453 97 aa9.65□□□□□ -0.86
LMX1B-203ENST00000526117 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
LMX1B-203ENST00000526117 Q6Q795 121 aa9.64□□□□□ -0.87
LMX1B-203ENST00000526117 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
LMX1B-203ENST00000526117 TCL1BO95988 128 aa9.63□□□□□ -0.87
LMX1B-203ENST00000526117 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
LMX1B-203ENST00000526117 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
LMX1B-203ENST00000526117 SCGB1C2P0DMR2 95 aa9.62□□□□□ -0.87
LMX1B-203ENST00000526117 H3BUT2 72 aa9.61□□□□□ -0.87
LMX1B-203ENST00000526117 FABP2P12104 132 aa9.61□□□□□ -0.87
LMX1B-203ENST00000526117 H3BMG7 143 aa9.6□□□□□ -0.87
LMX1B-203ENST00000526117 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
LMX1B-203ENST00000526117 UBE2V1Q13404 147 aa9.59□□□□□ -0.87
LMX1B-203ENST00000526117 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
LMX1B-203ENST00000526117 LYRM7Q5U5X0 104 aa9.56□□□□□ -0.88
LMX1B-203ENST00000526117 ATXN8Q156A1 80 aa9.54□□□□□ -0.88
LMX1B-203ENST00000526117 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
LMX1B-203ENST00000526117 BATFQ16520 125 aa9.52□□□□□ -0.89
LMX1B-203ENST00000526117 XP32Q5T750 250 aa9.52□□□□□ -0.89
LMX1B-203ENST00000526117 TRBV20-1A0A075B6N2 111 aa9.51□□□□□ -0.89
LMX1B-203ENST00000526117 NAA38Q9BRA0 125 aaKnown RBP9.51□□□□□ -0.89
LMX1B-203ENST00000526117 TRBV7-4A0A0J9YYF1 115 aa9.49□□□□□ -0.89
LMX1B-203ENST00000526117 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
LMX1B-203ENST00000526117 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
LMX1B-203ENST00000526117 ANKRD29Q8N6D5 301 aa9.49□□□□□ -0.89
LMX1B-203ENST00000526117 C9orf118A6NHY6 69 aa9.48□□□□□ -0.89
LMX1B-203ENST00000526117 TAX1BP3O14907 124 aa9.47□□□□□ -0.89
LMX1B-203ENST00000526117 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
LMX1B-203ENST00000526117 A0A087WSZ3 146 aa9.45□□□□□ -0.9
LMX1B-203ENST00000526117 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
LMX1B-203ENST00000526117 A0A1W2PPM0 123 aa9.43□□□□□ -0.9
LMX1B-203ENST00000526117 SEC61BP60468 96 aaKnown RBP9.43□□□□□ -0.9
LMX1B-203ENST00000526117 DSCR8Q96T75 97 aa9.42□□□□□ -0.9
LMX1B-203ENST00000526117 JMJD7-PLA2G4BH0Y9G9 81 aa9.41□□□□□ -0.9
LMX1B-203ENST00000526117 CCKP06307 115 aa9.41□□□□□ -0.9
LMX1B-203ENST00000526117 C9orf92A6NGG3 77 aa9.4□□□□□ -0.9
LMX1B-203ENST00000526117 C21orf62-AS1Q17RA5 79 aa9.4□□□□□ -0.9
LMX1B-203ENST00000526117 Q96NJ1 140 aa9.4□□□□□ -0.9
LMX1B-203ENST00000526117 A0A1B0GV72 72 aa9.39□□□□□ -0.91
LMX1B-203ENST00000526117 MUC2Q02817 5179 aa9.38□□□□□ -0.91
LMX1B-203ENST00000526117 C9JAW5 83 aa9.37□□□□□ -0.91
LMX1B-203ENST00000526117 COL5A1-AS1Q5SY13 56 aa9.37□□□□□ -0.91
LMX1B-203ENST00000526117 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
LMX1B-203ENST00000526117 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
LMX1B-203ENST00000526117 A0A1B0GW54 56 aa9.36□□□□□ -0.91
LMX1B-203ENST00000526117 H3BT86 120 aa9.36□□□□□ -0.91
LMX1B-203ENST00000526117 PDE6GP18545 87 aa9.36□□□□□ -0.91
LMX1B-203ENST00000526117 Q6ZQT0 140 aa9.33□□□□□ -0.92
LMX1B-203ENST00000526117 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
LMX1B-203ENST00000526117 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
LMX1B-203ENST00000526117 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
LMX1B-203ENST00000526117 VPS25Q9BRG1 176 aa9.29□□□□□ -0.92
LMX1B-203ENST00000526117 SPCS1Q9Y6A9 102 aa9.29□□□□□ -0.92
LMX1B-203ENST00000526117 Q75L30 129 aa9.26□□□□□ -0.93
LMX1B-203ENST00000526117 C14orf132Q9NPU4 83 aa9.26□□□□□ -0.93
LMX1B-203ENST00000526117 IGKV4-1P06312 121 aa9.25□□□□□ -0.93
LMX1B-203ENST00000526117 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
LMX1B-203ENST00000526117 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
LMX1B-203ENST00000526117 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
LMX1B-203ENST00000526117 PCP4L1A6NKN8 68 aa9.22□□□□□ -0.93
LMX1B-203ENST00000526117 J3KT08 172 aa9.22□□□□□ -0.93
LMX1B-203ENST00000526117 C20orf166-AS1Q96NR2 134 aa9.22□□□□□ -0.93
LMX1B-203ENST00000526117 K7EP34 96 aa9.21□□□□□ -0.94
LMX1B-203ENST00000526117 MTURNQ8N3F0 131 aa9.21□□□□□ -0.94
LMX1B-203ENST00000526117 A8MUU9 505 aa9.19□□□□□ -0.94
LMX1B-203ENST00000526117 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
LMX1B-203ENST00000526117 LINC00313P59037 77 aa9.18□□□□□ -0.94
LMX1B-203ENST00000526117 DEFB116Q30KQ4 102 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms