RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
PACSIN3-202ENST00000524509 Q6ZQY7 126 aa10.29□□□□□ -0.76
PACSIN3-202ENST00000524509 Q8NBF4 154 aa10.29□□□□□ -0.76
PACSIN3-202ENST00000524509 TSPAN13O95857 204 aa10.28□□□□□ -0.76
PACSIN3-202ENST00000524509 MOBPQ13875 183 aa10.28□□□□□ -0.76
PACSIN3-202ENST00000524509 F8WEM9 126 aa10.27□□□□□ -0.77
PACSIN3-202ENST00000524509 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.77
PACSIN3-202ENST00000524509 DNAL4O96015 105 aa10.26□□□□□ -0.77
PACSIN3-202ENST00000524509 Q8N377 158 aa10.25□□□□□ -0.77
PACSIN3-202ENST00000524509 SPINK1P00995 79 aa10.24□□□□□ -0.77
PACSIN3-202ENST00000524509 LINC01547P58512 204 aaPredicted RBP10.24□□□□□ -0.77
PACSIN3-202ENST00000524509 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
PACSIN3-202ENST00000524509 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
PACSIN3-202ENST00000524509 LPAP08519 4548 aa10.23□□□□□ -0.77
PACSIN3-202ENST00000524509 BATFQ16520 125 aa10.21□□□□□ -0.77
PACSIN3-202ENST00000524509 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
PACSIN3-202ENST00000524509 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
PACSIN3-202ENST00000524509 FAM218AQ96MZ4 157 aa10.2□□□□□ -0.78
PACSIN3-202ENST00000524509 KRTAP9-2Q9BYQ4 174 aa10.2□□□□□ -0.78
PACSIN3-202ENST00000524509 TRACP01848 142 aa10.18□□□□□ -0.78
PACSIN3-202ENST00000524509 Q6JHZ5 121 aa10.18□□□□□ -0.78
PACSIN3-202ENST00000524509 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
PACSIN3-202ENST00000524509 ORMDL1Q9P0S3 153 aa10.18□□□□□ -0.78
PACSIN3-202ENST00000524509 CD164Q04900 197 aa10.17□□□□□ -0.78
PACSIN3-202ENST00000524509 TMEM256-PLSCR3K7ERE1 68 aa10.16□□□□□ -0.78
PACSIN3-202ENST00000524509 IGLV8-61A0A075B6I0 122 aa10.14□□□□□ -0.79
PACSIN3-202ENST00000524509 LST1O00453 97 aa10.14□□□□□ -0.79
PACSIN3-202ENST00000524509 FABP2P12104 132 aa10.14□□□□□ -0.79
PACSIN3-202ENST00000524509 TRBV20-1A0A075B6N2 111 aa10.13□□□□□ -0.79
PACSIN3-202ENST00000524509 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
PACSIN3-202ENST00000524509 LIMD2Q9BT23 127 aa10.13□□□□□ -0.79
PACSIN3-202ENST00000524509 MUC2Q02817 5179 aa10.13□□□□□ -0.79
PACSIN3-202ENST00000524509 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
PACSIN3-202ENST00000524509 C9orf118A6NHY6 69 aa10.09□□□□□ -0.79
PACSIN3-202ENST00000524509 H3BUT2 72 aa10.08□□□□□ -0.8
PACSIN3-202ENST00000524509 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
PACSIN3-202ENST00000524509 COL5A1-AS1Q5SY13 56 aa10.08□□□□□ -0.8
PACSIN3-202ENST00000524509 PRR4Q16378 134 aa10.07□□□□□ -0.8
PACSIN3-202ENST00000524509 H3BMG7 143 aa10.06□□□□□ -0.8
PACSIN3-202ENST00000524509 FP248Q71RG6 208 aaPredicted RBP10.06□□□□□ -0.8
PACSIN3-202ENST00000524509 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
PACSIN3-202ENST00000524509 Q5XG85 94 aa10.05□□□□□ -0.8
PACSIN3-202ENST00000524509 NAA38Q9BRA0 125 aaKnown RBP10.05□□□□□ -0.8
PACSIN3-202ENST00000524509 TAX1BP3O14907 124 aa10.04□□□□□ -0.8
PACSIN3-202ENST00000524509 TCL1BO95988 128 aa10.04□□□□□ -0.8
PACSIN3-202ENST00000524509 KRTAP9-6A0A140TA67 174 aa10.03□□□□□ -0.8
PACSIN3-202ENST00000524509 BAALC-AS2P0C853 105 aa10.03□□□□□ -0.8
PACSIN3-202ENST00000524509 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
PACSIN3-202ENST00000524509 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
PACSIN3-202ENST00000524509 PCP4L1A6NKN8 68 aa10.02□□□□□ -0.81
PACSIN3-202ENST00000524509 IGFL1Q6UW32 110 aa10.02□□□□□ -0.81
PACSIN3-202ENST00000524509 ANKRD29Q8N6D5 301 aa10□□□□□ -0.81
PACSIN3-202ENST00000524509 Q6Q795 121 aa9.99□□□□□ -0.81
PACSIN3-202ENST00000524509 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
PACSIN3-202ENST00000524509 FAT4Q6V0I7 4981 aa9.99□□□□□ -0.81
PACSIN3-202ENST00000524509 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
PACSIN3-202ENST00000524509 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
PACSIN3-202ENST00000524509 RBM3P98179 157 aaKnown RBP9.97□□□□□ -0.81
PACSIN3-202ENST00000524509 RETNLBQ9BQ08 111 aa9.97□□□□□ -0.81
PACSIN3-202ENST00000524509 SS18L2Q9UHA2 77 aa9.97□□□□□ -0.81
PACSIN3-202ENST00000524509 JMJD7-PLA2G4BH0Y9G9 81 aa9.96□□□□□ -0.82
PACSIN3-202ENST00000524509 DSCR8Q96T75 97 aa9.96□□□□□ -0.82
PACSIN3-202ENST00000524509 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
PACSIN3-202ENST00000524509 C9JAW5 83 aa9.94□□□□□ -0.82
PACSIN3-202ENST00000524509 C21orf62-AS1Q17RA5 79 aa9.94□□□□□ -0.82
PACSIN3-202ENST00000524509 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
PACSIN3-202ENST00000524509 A0A0G2JQZ4 141 aa9.93□□□□□ -0.82
PACSIN3-202ENST00000524509 SPCS1Q9Y6A9 102 aa9.93□□□□□ -0.82
PACSIN3-202ENST00000524509 TRBV7-4A0A0J9YYF1 115 aa9.92□□□□□ -0.82
PACSIN3-202ENST00000524509 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
PACSIN3-202ENST00000524509 H3BT86 120 aa9.91□□□□□ -0.82
PACSIN3-202ENST00000524509 PDE6GP18545 87 aa9.91□□□□□ -0.82
PACSIN3-202ENST00000524509 CCKP06307 115 aa9.87□□□□□ -0.83
PACSIN3-202ENST00000524509 A0A1B0GV72 72 aa9.86□□□□□ -0.83
PACSIN3-202ENST00000524509 A0A1B0GW54 56 aa9.86□□□□□ -0.83
PACSIN3-202ENST00000524509 C1orf195Q5TG92 126 aa9.86□□□□□ -0.83
PACSIN3-202ENST00000524509 GTF2H5Q6ZYL4 71 aa9.86□□□□□ -0.83
PACSIN3-202ENST00000524509 CDIP1Q9H305 208 aa9.85□□□□□ -0.83
PACSIN3-202ENST00000524509 A0A087WSZ3 146 aa9.84□□□□□ -0.83
PACSIN3-202ENST00000524509 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
PACSIN3-202ENST00000524509 LOC110117498A0A087WWA1 95 aa9.82□□□□□ -0.84
PACSIN3-202ENST00000524509 K7EP34 96 aa9.82□□□□□ -0.84
PACSIN3-202ENST00000524509 OBSCN-AS1Q96MR7 158 aa9.8□□□□□ -0.84
PACSIN3-202ENST00000524509 VPS25Q9BRG1 176 aa9.8□□□□□ -0.84
PACSIN3-202ENST00000524509 KRTAP13-3Q3SY46 172 aa9.79□□□□□ -0.84
PACSIN3-202ENST00000524509 Q6ZQT0 140 aa9.77□□□□□ -0.85
PACSIN3-202ENST00000524509 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
PACSIN3-202ENST00000524509 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
PACSIN3-202ENST00000524509 F8W1H4 67 aa9.73□□□□□ -0.85
PACSIN3-202ENST00000524509 J3KT08 172 aa9.68□□□□□ -0.86
PACSIN3-202ENST00000524509 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
PACSIN3-202ENST00000524509 IGKV4-1P06312 121 aa9.66□□□□□ -0.86
PACSIN3-202ENST00000524509 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
PACSIN3-202ENST00000524509 Q96NJ1 140 aa9.66□□□□□ -0.86
PACSIN3-202ENST00000524509 SIGMAR1Q99720 223 aa9.66□□□□□ -0.86
PACSIN3-202ENST00000524509 LINC00472Q9H8W2 130 aa9.66□□□□□ -0.86
PACSIN3-202ENST00000524509 C9orf92A6NGG3 77 aa9.65□□□□□ -0.86
PACSIN3-202ENST00000524509 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
PACSIN3-202ENST00000524509 XP32Q5T750 250 aa9.65□□□□□ -0.86
PACSIN3-202ENST00000524509 NREPQ16612 68 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms