RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 FXYD2P54710 66 aa7.19□□□□□ -1.26
CCNC-216ENST00000523961 LINC01547P58512 204 aaPredicted RBP7.19□□□□□ -1.26
CCNC-216ENST00000523961 Q1RN00 199 aa7.18□□□□□ -1.26
CCNC-216ENST00000523961 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
CCNC-216ENST00000523961 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
CCNC-216ENST00000523961 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
CCNC-216ENST00000523961 LCE3BQ5TA77 95 aa7.17□□□□□ -1.26
CCNC-216ENST00000523961 Q6ZQY7 126 aa7.16□□□□□ -1.26
CCNC-216ENST00000523961 SMIM29Q86T20 159 aa7.16□□□□□ -1.26
CCNC-216ENST00000523961 Q8N377 158 aa7.16□□□□□ -1.26
CCNC-216ENST00000523961 H0YGX0 51 aa7.15□□□□□ -1.26
CCNC-216ENST00000523961 SNCGO76070 127 aa7.15□□□□□ -1.26
CCNC-216ENST00000523961 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.15□□□□□ -1.26
CCNC-216ENST00000523961 LRP2P98164 4655 aa7.14□□□□□ -1.27
CCNC-216ENST00000523961 SMIM6P0DI80 62 aa7.14□□□□□ -1.27
CCNC-216ENST00000523961 PRO1933Q9H354 126 aa7.14□□□□□ -1.27
CCNC-216ENST00000523961 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
CCNC-216ENST00000523961 F8WEM9 126 aa7.12□□□□□ -1.27
CCNC-216ENST00000523961 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
CCNC-216ENST00000523961 PPDPFLQ8WWR9 84 aa7.12□□□□□ -1.27
CCNC-216ENST00000523961 CD164Q04900 197 aa7.11□□□□□ -1.27
CCNC-216ENST00000523961 OCIAD2Q56VL3 154 aa7.1□□□□□ -1.27
CCNC-216ENST00000523961 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
CCNC-216ENST00000523961 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
CCNC-216ENST00000523961 A0A1B0GX51 115 aa7.09□□□□□ -1.27
CCNC-216ENST00000523961 K7ERJ3 54 aa7.09□□□□□ -1.27
CCNC-216ENST00000523961 TRIAP1O43715 76 aa7.09□□□□□ -1.27
CCNC-216ENST00000523961 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
CCNC-216ENST00000523961 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.27
CCNC-216ENST00000523961 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
CCNC-216ENST00000523961 PSMB2P49721 201 aa7.08□□□□□ -1.28
CCNC-216ENST00000523961 SNHG12Q9BXW3 62 aa7.08□□□□□ -1.28
CCNC-216ENST00000523961 COX6CP09669 75 aa7.07□□□□□ -1.28
CCNC-216ENST00000523961 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
CCNC-216ENST00000523961 LOC105371267A0A1B0GV96 52 aa7.06□□□□□ -1.28
CCNC-216ENST00000523961 Q6JHZ5 121 aa7.06□□□□□ -1.28
CCNC-216ENST00000523961 LPAP08519 4548 aa7.06□□□□□ -1.28
CCNC-216ENST00000523961 UBR4Q5T4S7 5183 aa7.05□□□□□ -1.28
CCNC-216ENST00000523961 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
CCNC-216ENST00000523961 M0R143 59 aa7.05□□□□□ -1.28
CCNC-216ENST00000523961 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
CCNC-216ENST00000523961 CLEC2BQ92478 149 aa7.04□□□□□ -1.28
CCNC-216ENST00000523961 TSTD3H0UI37 97 aa7.03□□□□□ -1.28
CCNC-216ENST00000523961 Q5XG85 94 aa7.03□□□□□ -1.28
CCNC-216ENST00000523961 DNAL4O96015 105 aa7.02□□□□□ -1.29
CCNC-216ENST00000523961 NDUFV3P56181 108 aaKnown RBP7.01□□□□□ -1.29
CCNC-216ENST00000523961 KRTAP13-3Q3SY46 172 aa7.01□□□□□ -1.29
CCNC-216ENST00000523961 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
CCNC-216ENST00000523961 KRTAP9-9Q9BYP9 154 aa7.01□□□□□ -1.29
CCNC-216ENST00000523961 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
CCNC-216ENST00000523961 H3BQ85 93 aa7□□□□□ -1.29
CCNC-216ENST00000523961 SCGB1C2P0DMR2 95 aa7□□□□□ -1.29
CCNC-216ENST00000523961 FABP2P12104 132 aa7□□□□□ -1.29
CCNC-216ENST00000523961 H3BUT2 72 aa6.99□□□□□ -1.29
CCNC-216ENST00000523961 TCL1BO95988 128 aa6.99□□□□□ -1.29
CCNC-216ENST00000523961 ORMDL1Q9P0S3 153 aa6.99□□□□□ -1.29
CCNC-216ENST00000523961 TRBV7-7A0A0K0K1E9 115 aa6.97□□□□□ -1.29
CCNC-216ENST00000523961 H3BMG7 143 aa6.96□□□□□ -1.3
CCNC-216ENST00000523961 TRACP01848 142 aa6.96□□□□□ -1.3
CCNC-216ENST00000523961 C1orf195Q5TG92 126 aa6.96□□□□□ -1.3
CCNC-216ENST00000523961 TMEM256-PLSCR3K7ERE1 68 aa6.95□□□□□ -1.3
CCNC-216ENST00000523961 LST1O00453 97 aa6.95□□□□□ -1.3
CCNC-216ENST00000523961 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
CCNC-216ENST00000523961 Q6Q795 121 aa6.93□□□□□ -1.3
CCNC-216ENST00000523961 TEN1Q86WV5 123 aa6.93□□□□□ -1.3
CCNC-216ENST00000523961 UBE2V1Q13404 147 aa6.92□□□□□ -1.3
CCNC-216ENST00000523961 BATFQ16520 125 aa6.92□□□□□ -1.3
CCNC-216ENST00000523961 NAA38Q9BRA0 125 aaKnown RBP6.91□□□□□ -1.3
CCNC-216ENST00000523961 SS18L2Q9UHA2 77 aa6.9□□□□□ -1.3
CCNC-216ENST00000523961 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
CCNC-216ENST00000523961 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
CCNC-216ENST00000523961 LYRM7Q5U5X0 104 aa6.89□□□□□ -1.31
CCNC-216ENST00000523961 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
CCNC-216ENST00000523961 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
CCNC-216ENST00000523961 BAALC-AS2P0C853 105 aa6.88□□□□□ -1.31
CCNC-216ENST00000523961 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
CCNC-216ENST00000523961 A0A1B0GV72 72 aa6.87□□□□□ -1.31
CCNC-216ENST00000523961 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
CCNC-216ENST00000523961 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
CCNC-216ENST00000523961 A0A087WSZ3 146 aa6.86□□□□□ -1.31
CCNC-216ENST00000523961 TRBV7-4A0A0J9YYF1 115 aa6.85□□□□□ -1.31
CCNC-216ENST00000523961 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
CCNC-216ENST00000523961 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.31
CCNC-216ENST00000523961 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
CCNC-216ENST00000523961 CCKP06307 115 aa6.83□□□□□ -1.32
CCNC-216ENST00000523961 TAX1BP3O14907 124 aa6.82□□□□□ -1.32
CCNC-216ENST00000523961 DSCR8Q96T75 97 aa6.82□□□□□ -1.32
CCNC-216ENST00000523961 A0A0U1RQV1 116 aa6.81□□□□□ -1.32
CCNC-216ENST00000523961 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
CCNC-216ENST00000523961 A0A1W2PPM0 123 aa6.79□□□□□ -1.32
CCNC-216ENST00000523961 C9JAW5 83 aa6.79□□□□□ -1.32
CCNC-216ENST00000523961 JMJD7-PLA2G4BH0Y9G9 81 aa6.79□□□□□ -1.32
CCNC-216ENST00000523961 Q96NJ1 140 aa6.78□□□□□ -1.32
CCNC-216ENST00000523961 VPS25Q9BRG1 176 aa6.78□□□□□ -1.32
CCNC-216ENST00000523961 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
CCNC-216ENST00000523961 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
CCNC-216ENST00000523961 PCOTHQ58A44 107 aa6.75□□□□□ -1.33
CCNC-216ENST00000523961 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
CCNC-216ENST00000523961 OBSCN-AS1Q96MR7 158 aa6.75□□□□□ -1.33
CCNC-216ENST00000523961 LOC110117498A0A087WWA1 95 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms