RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 LAMA3Q16787 3333 aa1.98□□□□□ -2.09
TRPS1-207ENST00000518018 MAP1BP46821 2468 aaKnown RBP1.98□□□□□ -2.09
TRPS1-207ENST00000518018 CHD9Q3L8U1 2897 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 WDR87Q6ZQQ6 2873 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 PKD1L2Q7Z442 2459 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 CHD7Q9P2D1 2997 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 DEFB135Q30KP9 77 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 PCOTHQ58A44 107 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 PRUNE2Q8WUY3 3088 aa1.97□□□□□ -2.09
TRPS1-207ENST00000518018 ANKHD1Q8IWZ3 2542 aaKnown RBP1.96□□□□□ -2.09
TRPS1-207ENST00000518018 LAMA2P24043 3122 aaKnown RBP1.96□□□□□ -2.1
TRPS1-207ENST00000518018 H3BNG1 76 aa1.96□□□□□ -2.1
TRPS1-207ENST00000518018 LINC01558Q9Y6Z2 57 aa1.96□□□□□ -2.1
TRPS1-207ENST00000518018 CACNA1BQ00975 2339 aa1.96□□□□□ -2.1
TRPS1-207ENST00000518018 PKDREJQ9NTG1 2253 aa1.96□□□□□ -2.1
TRPS1-207ENST00000518018 SPTBN2O15020 2390 aa1.95□□□□□ -2.1
TRPS1-207ENST00000518018 DNAH14Q0VDD8 3507 aa1.95□□□□□ -2.1
TRPS1-207ENST00000518018 DEFB131BA0A096LNP1 70 aa1.95□□□□□ -2.1
TRPS1-207ENST00000518018 A0A1B0GU69 56 aa1.95□□□□□ -2.1
TRPS1-207ENST00000518018 CDH23Q9H251 3354 aa1.95□□□□□ -2.1
TRPS1-207ENST00000518018 C5orf42Q9H799 3197 aa1.95□□□□□ -2.1
TRPS1-207ENST00000518018 ACYP2P14621 99 aa1.94□□□□□ -2.1
TRPS1-207ENST00000518018 LINC01556Q5JQF7 62 aa1.94□□□□□ -2.1
TRPS1-207ENST00000518018 MUC6Q6W4X9 2439 aa1.93□□□□□ -2.1
TRPS1-207ENST00000518018 XIRP2A4UGR9 3374 aa1.93□□□□□ -2.1
TRPS1-207ENST00000518018 UQCR11O14957 56 aa1.93□□□□□ -2.1
TRPS1-207ENST00000518018 SPRR1AP35321 89 aa1.93□□□□□ -2.1
TRPS1-207ENST00000518018 URB1O60287 2271 aaKnown RBP1.93□□□□□ -2.1
TRPS1-207ENST00000518018 KMT2BQ9UMN6 2715 aaPredicted RBP1.93□□□□□ -2.1
TRPS1-207ENST00000518018 UNC79Q9P2D8 2635 aa1.92□□□□□ -2.1
TRPS1-207ENST00000518018 DOPEY2Q9Y3R5 2298 aa1.92□□□□□ -2.1
TRPS1-207ENST00000518018 CEP290O15078 2479 aa1.92□□□□□ -2.1
TRPS1-207ENST00000518018 TTC28Q96AY4 2481 aa1.92□□□□□ -2.1
TRPS1-207ENST00000518018 DEFB4AO15263 64 aa1.92□□□□□ -2.1
TRPS1-207ENST00000518018 ZDBF2Q9HCK1 2354 aa1.92□□□□□ -2.1
TRPS1-207ENST00000518018 CEP250Q9BV73 2442 aa1.91□□□□□ -2.1
TRPS1-207ENST00000518018 PIEZO1Q92508 2521 aa1.91□□□□□ -2.1
TRPS1-207ENST00000518018 Q96NJ1 140 aa1.91□□□□□ -2.1
TRPS1-207ENST00000518018 TPRP12270 2363 aaKnown RBP1.91□□□□□ -2.1
TRPS1-207ENST00000518018 WNK2Q9Y3S1 2297 aa1.91□□□□□ -2.1
TRPS1-207ENST00000518018 DCHS1Q96JQ0 3298 aa1.9□□□□□ -2.1
TRPS1-207ENST00000518018 CFAP47Q6ZTR5 3102 aa1.9□□□□□ -2.11
TRPS1-207ENST00000518018 RP1L1Q8IWN7 2480 aaPredicted RBP1.9□□□□□ -2.11
TRPS1-207ENST00000518018 MMP24-AS1A0A0U1RRL7 71 aa1.9□□□□□ -2.11
TRPS1-207ENST00000518018 PRLHP81277 87 aa1.9□□□□□ -2.11
TRPS1-207ENST00000518018 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
TRPS1-207ENST00000518018 CFAP54Q96N23 3096 aa1.9□□□□□ -2.11
TRPS1-207ENST00000518018 KRTAP12-1P59990 96 aa1.89□□□□□ -2.11
TRPS1-207ENST00000518018 UBE2DNLQ8IWF7 75 aa1.89□□□□□ -2.11
TRPS1-207ENST00000518018 USP34Q70CQ2 3546 aa1.89□□□□□ -2.11
TRPS1-207ENST00000518018 APC2O95996 2303 aa1.89□□□□□ -2.11
TRPS1-207ENST00000518018 ROS1P08922 2347 aa1.88□□□□□ -2.11
TRPS1-207ENST00000518018 SPRR1BP22528 89 aa1.88□□□□□ -2.11
TRPS1-207ENST00000518018 SPINK7P58062 85 aa1.88□□□□□ -2.11
TRPS1-207ENST00000518018 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
TRPS1-207ENST00000518018 WDFY4Q6ZS81 3184 aa1.88□□□□□ -2.11
TRPS1-207ENST00000518018 MYO15AQ9UKN7 3530 aa1.87□□□□□ -2.11
TRPS1-207ENST00000518018 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
TRPS1-207ENST00000518018 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
TRPS1-207ENST00000518018 PIEZO2Q9H5I5 2752 aa1.87□□□□□ -2.11
TRPS1-207ENST00000518018 LINC00472Q9H8W2 130 aa1.87□□□□□ -2.11
TRPS1-207ENST00000518018 PLAC8Q9NZF1 115 aa1.87□□□□□ -2.11
TRPS1-207ENST00000518018 CNOT1A5YKK6 2376 aaKnown RBP1.87□□□□□ -2.11
TRPS1-207ENST00000518018 CHD8Q9HCK8 2581 aa1.87□□□□□ -2.11
TRPS1-207ENST00000518018 EP300Q09472 2414 aaPredicted RBP1.87□□□□□ -2.11
TRPS1-207ENST00000518018 SPTBN1Q01082 2364 aaKnown RBP1.86□□□□□ -2.11
TRPS1-207ENST00000518018 NCOR1O75376 2440 aa1.86□□□□□ -2.11
TRPS1-207ENST00000518018 A0A096LNI7 61 aa1.86□□□□□ -2.11
TRPS1-207ENST00000518018 WDFY3Q8IZQ1 3526 aa1.86□□□□□ -2.11
TRPS1-207ENST00000518018 SETXQ7Z333 2677 aaKnown RBP1.85□□□□□ -2.11
TRPS1-207ENST00000518018 SPATA8Q6RVD6 105 aa1.85□□□□□ -2.11
TRPS1-207ENST00000518018 ABCA2Q9BZC7 2435 aa1.85□□□□□ -2.11
TRPS1-207ENST00000518018 PTPRQQ9UMZ3 2332 aa1.84□□□□□ -2.11
TRPS1-207ENST00000518018 REV3LO60673 3130 aa1.84□□□□□ -2.11
TRPS1-207ENST00000518018 SPINK6Q6UWN8 80 aa1.84□□□□□ -2.11
TRPS1-207ENST00000518018 PTPRZ1P23471 2315 aaPredicted RBP1.84□□□□□ -2.12
TRPS1-207ENST00000518018 EPG5Q9HCE0 2579 aa1.84□□□□□ -2.12
TRPS1-207ENST00000518018 WNK1Q9H4A3 2382 aa1.84□□□□□ -2.12
TRPS1-207ENST00000518018 OTOGLQ3ZCN5 2332 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 FREM2Q5SZK8 3169 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 VPS13AQ96RL7 3174 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 ZZEF1O43149 2961 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 COL6A6A6NMZ7 2263 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 BDP1A6H8Y1 2624 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 ACACAQ13085 2346 aa1.83□□□□□ -2.12
TRPS1-207ENST00000518018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.83□□□□□ -2.12
TRPS1-207ENST00000518018 FASNP49327 2511 aaKnown RBP1.82□□□□□ -2.12
TRPS1-207ENST00000518018 LAMA1P25391 3075 aa1.82□□□□□ -2.12
TRPS1-207ENST00000518018 LY6G6CO95867 125 aa1.82□□□□□ -2.12
TRPS1-207ENST00000518018 CACNA1HO95180 2353 aa1.82□□□□□ -2.12
TRPS1-207ENST00000518018 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
TRPS1-207ENST00000518018 SPTBN4Q9H254 2564 aa1.82□□□□□ -2.12
TRPS1-207ENST00000518018 CHD6Q8TD26 2715 aa1.82□□□□□ -2.12
TRPS1-207ENST00000518018 SPTA1P02549 2419 aa1.81□□□□□ -2.12
TRPS1-207ENST00000518018 KRTAP13-1Q8IUC0 172 aa1.81□□□□□ -2.12
TRPS1-207ENST00000518018 ASH1LQ9NR48 2969 aaKnown RBP1.8□□□□□ -2.12
TRPS1-207ENST00000518018 PCNX1Q96RV3 2341 aa1.8□□□□□ -2.12
TRPS1-207ENST00000518018 NCOR2Q9Y618 2525 aa1.8□□□□□ -2.12
TRPS1-207ENST00000518018 SPEGQ15772 3267 aa1.8□□□□□ -2.12
TRPS1-207ENST00000518018 USP24Q9UPU5 2620 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms