RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
TRPS1-207ENST00000518018 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
TRPS1-207ENST00000518018 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
TRPS1-207ENST00000518018 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
TRPS1-207ENST00000518018 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
TRPS1-207ENST00000518018 FOXD1Q16676 465 aa16.66■□□□□ 0.26
TRPS1-207ENST00000518018 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
TRPS1-207ENST00000518018 ADRA2BP18089 450 aa16.04■□□□□ 0.16
TRPS1-207ENST00000518018 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
TRPS1-207ENST00000518018 MSH5O43196 834 aa15.31■□□□□ 0.04
TRPS1-207ENST00000518018 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
TRPS1-207ENST00000518018 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
TRPS1-207ENST00000518018 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
TRPS1-207ENST00000518018 KCNA4P22459 653 aa14.49□□□□□ -0.09
TRPS1-207ENST00000518018 NCBP3Q53F19 620 aaKnown RBP14.37□□□□□ -0.11
TRPS1-207ENST00000518018 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
TRPS1-207ENST00000518018 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
TRPS1-207ENST00000518018 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
TRPS1-207ENST00000518018 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
TRPS1-207ENST00000518018 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
TRPS1-207ENST00000518018 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
TRPS1-207ENST00000518018 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
TRPS1-207ENST00000518018 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
TRPS1-207ENST00000518018 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
TRPS1-207ENST00000518018 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
TRPS1-207ENST00000518018 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
TRPS1-207ENST00000518018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRPS1-207ENST00000518018 ZBTB22O15209 634 aa13.35□□□□□ -0.27
TRPS1-207ENST00000518018 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
TRPS1-207ENST00000518018 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
TRPS1-207ENST00000518018 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
TRPS1-207ENST00000518018 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
TRPS1-207ENST00000518018 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
TRPS1-207ENST00000518018 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
TRPS1-207ENST00000518018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
TRPS1-207ENST00000518018 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
TRPS1-207ENST00000518018 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
TRPS1-207ENST00000518018 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
TRPS1-207ENST00000518018 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
TRPS1-207ENST00000518018 APLP2Q06481 763 aa12.8□□□□□ -0.36
TRPS1-207ENST00000518018 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
TRPS1-207ENST00000518018 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
TRPS1-207ENST00000518018 CAPN15O75808 1086 aa12.73□□□□□ -0.37
TRPS1-207ENST00000518018 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
TRPS1-207ENST00000518018 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
TRPS1-207ENST00000518018 DSG3P32926 999 aa12.52□□□□□ -0.41
TRPS1-207ENST00000518018 ABCB7O75027 752 aa12.51□□□□□ -0.41
TRPS1-207ENST00000518018 POLA2Q14181 598 aa12.49□□□□□ -0.41
TRPS1-207ENST00000518018 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
TRPS1-207ENST00000518018 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-207ENST00000518018 FBLN2P98095 1184 aa12.21□□□□□ -0.45
TRPS1-207ENST00000518018 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
TRPS1-207ENST00000518018 FKBP8Q14318 412 aa11.99□□□□□ -0.49
TRPS1-207ENST00000518018 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
TRPS1-207ENST00000518018 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
TRPS1-207ENST00000518018 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
TRPS1-207ENST00000518018 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
TRPS1-207ENST00000518018 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
TRPS1-207ENST00000518018 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
TRPS1-207ENST00000518018 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
TRPS1-207ENST00000518018 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
TRPS1-207ENST00000518018 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRPS1-207ENST00000518018 PROM2Q8N271 834 aa11.74□□□□□ -0.53
TRPS1-207ENST00000518018 REM2Q8IYK8 340 aaPredicted RBP11.67□□□□□ -0.54
TRPS1-207ENST00000518018 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
TRPS1-207ENST00000518018 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
TRPS1-207ENST00000518018 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
TRPS1-207ENST00000518018 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
TRPS1-207ENST00000518018 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
TRPS1-207ENST00000518018 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
TRPS1-207ENST00000518018 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
TRPS1-207ENST00000518018 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-207ENST00000518018 MIER1Q8N108 512 aa11.33□□□□□ -0.6
TRPS1-207ENST00000518018 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRPS1-207ENST00000518018 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
TRPS1-207ENST00000518018 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
TRPS1-207ENST00000518018 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
TRPS1-207ENST00000518018 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
TRPS1-207ENST00000518018 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
TRPS1-207ENST00000518018 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
TRPS1-207ENST00000518018 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
TRPS1-207ENST00000518018 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
TRPS1-207ENST00000518018 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
TRPS1-207ENST00000518018 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
TRPS1-207ENST00000518018 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
TRPS1-207ENST00000518018 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
TRPS1-207ENST00000518018 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRPS1-207ENST00000518018 POTEHQ6S545 545 aa11.05□□□□□ -0.64
TRPS1-207ENST00000518018 NUBP1P53384 320 aa11.04□□□□□ -0.64
TRPS1-207ENST00000518018 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
TRPS1-207ENST00000518018 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
TRPS1-207ENST00000518018 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-207ENST00000518018 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
TRPS1-207ENST00000518018 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
TRPS1-207ENST00000518018 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
TRPS1-207ENST00000518018 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
TRPS1-207ENST00000518018 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
TRPS1-207ENST00000518018 HAX1O00165 279 aa10.92□□□□□ -0.66
TRPS1-207ENST00000518018 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-207ENST00000518018 GSE1Q14687 1217 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms