RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SLC25A20O43772 301 aa4.44□□□□□ -1.7
SCARNA20.3-201ENST00000516913 MEIG1Q5JSS6 88 aa4.44□□□□□ -1.7
SCARNA20.3-201ENST00000516913 RAB37Q96AX2 223 aa4.44□□□□□ -1.7
SCARNA20.3-201ENST00000516913 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
SCARNA20.3-201ENST00000516913 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
SCARNA20.3-201ENST00000516913 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
SCARNA20.3-201ENST00000516913 SFTA2Q6UW10 78 aa4.42□□□□□ -1.7
SCARNA20.3-201ENST00000516913 HRCT1Q6UXD1 115 aa4.42□□□□□ -1.7
SCARNA20.3-201ENST00000516913 A6NDN8 102 aa4.41□□□□□ -1.7
SCARNA20.3-201ENST00000516913 C9orf118A6NHY6 69 aa4.41□□□□□ -1.7
SCARNA20.3-201ENST00000516913 H3BUT2 72 aa4.41□□□□□ -1.7
SCARNA20.3-201ENST00000516913 SPRR1BP22528 89 aa4.41□□□□□ -1.7
SCARNA20.3-201ENST00000516913 IFITM1P13164 125 aa4.4□□□□□ -1.71
SCARNA20.3-201ENST00000516913 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
SCARNA20.3-201ENST00000516913 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
SCARNA20.3-201ENST00000516913 SMIM29Q86T20 159 aa4.39□□□□□ -1.71
SCARNA20.3-201ENST00000516913 TRAV23DV6A0A075B6W5 121 aa4.38□□□□□ -1.71
SCARNA20.3-201ENST00000516913 A0A1W2PPM0 123 aa4.38□□□□□ -1.71
SCARNA20.3-201ENST00000516913 NDUFC2O95298 119 aa4.38□□□□□ -1.71
SCARNA20.3-201ENST00000516913 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
SCARNA20.3-201ENST00000516913 PRO1854Q9UHT4 67 aa4.38□□□□□ -1.71
SCARNA20.3-201ENST00000516913 TMEM238LA0A1B0GVL6 79 aa4.37□□□□□ -1.71
SCARNA20.3-201ENST00000516913 A6NJY4 79 aa4.37□□□□□ -1.71
SCARNA20.3-201ENST00000516913 H7C2G1 150 aa4.37□□□□□ -1.71
SCARNA20.3-201ENST00000516913 C1orf195Q5TG92 126 aa4.37□□□□□ -1.71
SCARNA20.3-201ENST00000516913 TRIAP1O43715 76 aa4.35□□□□□ -1.71
SCARNA20.3-201ENST00000516913 VAMP3Q15836 100 aa4.35□□□□□ -1.71
SCARNA20.3-201ENST00000516913 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
SCARNA20.3-201ENST00000516913 K7EP34 96 aa4.34□□□□□ -1.71
SCARNA20.3-201ENST00000516913 UBE2V1Q13404 147 aa4.34□□□□□ -1.71
SCARNA20.3-201ENST00000516913 Q1RN00 199 aa4.34□□□□□ -1.71
SCARNA20.3-201ENST00000516913 S100A7L2Q5SY68 101 aa4.34□□□□□ -1.71
SCARNA20.3-201ENST00000516913 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
SCARNA20.3-201ENST00000516913 TCL1BO95988 128 aa4.33□□□□□ -1.72
SCARNA20.3-201ENST00000516913 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
SCARNA20.3-201ENST00000516913 SMIM11BQ8TCY0 68 aa4.33□□□□□ -1.72
SCARNA20.3-201ENST00000516913 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
SCARNA20.3-201ENST00000516913 FABP2P12104 132 aa4.32□□□□□ -1.72
SCARNA20.3-201ENST00000516913 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
SCARNA20.3-201ENST00000516913 CLEC2BQ92478 149 aa4.32□□□□□ -1.72
SCARNA20.3-201ENST00000516913 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
SCARNA20.3-201ENST00000516913 TRAV13-2A0A0B4J235 113 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 H3BMG7 143 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 PSMB2P49721 201 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 SMCPP49901 116 aaPredicted RBP4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 C6orf99Q4VX62 202 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 Q5XG85 94 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 MTURNQ8N3F0 131 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 DEFB105AQ8NG35 78 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 COPS9Q8WXC6 57 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 PRO0461Q9UI25 63 aa4.31□□□□□ -1.72
SCARNA20.3-201ENST00000516913 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
SCARNA20.3-201ENST00000516913 OR13C6PQ8NH95 151 aa4.3□□□□□ -1.72
SCARNA20.3-201ENST00000516913 IGLV5-48A0A075B6I7 105 aa4.29□□□□□ -1.72
SCARNA20.3-201ENST00000516913 SCGB1C2P0DMR2 95 aa4.29□□□□□ -1.72
SCARNA20.3-201ENST00000516913 CD164Q04900 197 aa4.29□□□□□ -1.72
SCARNA20.3-201ENST00000516913 M0R2T5 61 aa4.28□□□□□ -1.72
SCARNA20.3-201ENST00000516913 COX7BP24311 80 aa4.28□□□□□ -1.72
SCARNA20.3-201ENST00000516913 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
SCARNA20.3-201ENST00000516913 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
SCARNA20.3-201ENST00000516913 LAMTOR3Q9UHA4 124 aa4.28□□□□□ -1.72
SCARNA20.3-201ENST00000516913 LST1O00453 97 aa4.27□□□□□ -1.73
SCARNA20.3-201ENST00000516913 GTF2H5Q6ZYL4 71 aa4.27□□□□□ -1.73
SCARNA20.3-201ENST00000516913 TRBV20-1A0A075B6N2 111 aa4.26□□□□□ -1.73
SCARNA20.3-201ENST00000516913 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
SCARNA20.3-201ENST00000516913 LCE2BO14633 110 aa4.26□□□□□ -1.73
SCARNA20.3-201ENST00000516913 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
SCARNA20.3-201ENST00000516913 C9JAW5 83 aa4.25□□□□□ -1.73
SCARNA20.3-201ENST00000516913 ATXN8Q156A1 80 aa4.25□□□□□ -1.73
SCARNA20.3-201ENST00000516913 COX6CP09669 75 aa4.24□□□□□ -1.73
SCARNA20.3-201ENST00000516913 COX6B2Q6YFQ2 88 aa4.24□□□□□ -1.73
SCARNA20.3-201ENST00000516913 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
SCARNA20.3-201ENST00000516913 F8W1H4 67 aa4.23□□□□□ -1.73
SCARNA20.3-201ENST00000516913 H0YGX0 51 aa4.23□□□□□ -1.73
SCARNA20.3-201ENST00000516913 MT2AP02795 61 aa4.23□□□□□ -1.73
SCARNA20.3-201ENST00000516913 LYRM7Q5U5X0 104 aa4.23□□□□□ -1.73
SCARNA20.3-201ENST00000516913 LINC00575Q6W349 94 aa4.23□□□□□ -1.73
SCARNA20.3-201ENST00000516913 TRACP01848 142 aa4.22□□□□□ -1.73
SCARNA20.3-201ENST00000516913 ETDBQ3ZM63 59 aa4.22□□□□□ -1.73
SCARNA20.3-201ENST00000516913 MT1FP04733 61 aa4.21□□□□□ -1.74
SCARNA20.3-201ENST00000516913 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
SCARNA20.3-201ENST00000516913 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
SCARNA20.3-201ENST00000516913 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
SCARNA20.3-201ENST00000516913 BAALC-AS2P0C853 105 aa4.2□□□□□ -1.74
SCARNA20.3-201ENST00000516913 Q6Q795 121 aa4.2□□□□□ -1.74
SCARNA20.3-201ENST00000516913 IGFL1Q6UW32 110 aa4.2□□□□□ -1.74
SCARNA20.3-201ENST00000516913 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
SCARNA20.3-201ENST00000516913 ANKRD29Q8N6D5 301 aa4.2□□□□□ -1.74
SCARNA20.3-201ENST00000516913 hADV29S1A0JD25 119 aa4.19□□□□□ -1.74
SCARNA20.3-201ENST00000516913 Q75L30 129 aa4.19□□□□□ -1.74
SCARNA20.3-201ENST00000516913 A0A1B0GX51 115 aa4.18□□□□□ -1.74
SCARNA20.3-201ENST00000516913 H3BT86 120 aa4.18□□□□□ -1.74
SCARNA20.3-201ENST00000516913 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
SCARNA20.3-201ENST00000516913 OCIAD2Q56VL3 154 aa4.17□□□□□ -1.74
SCARNA20.3-201ENST00000516913 Q6ZQY7 126 aa4.17□□□□□ -1.74
SCARNA20.3-201ENST00000516913 TEN1Q86WV5 123 aa4.17□□□□□ -1.74
SCARNA20.3-201ENST00000516913 CBY1Q9Y3M2 126 aa4.16□□□□□ -1.74
SCARNA20.3-201ENST00000516913 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
SCARNA20.3-201ENST00000516913 A8MUU9 505 aa4.15□□□□□ -1.75
SCARNA20.3-201ENST00000516913 Q96NJ1 140 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms