RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 Q8N377 158 aa10.33□□□□□ -0.76
PCDH1-207ENST00000514773 A0A1B0GX51 115 aa10.32□□□□□ -0.76
PCDH1-207ENST00000514773 M0R143 59 aa10.32□□□□□ -0.76
PCDH1-207ENST00000514773 GHRHP01286 108 aa10.32□□□□□ -0.76
PCDH1-207ENST00000514773 PSMB2P49721 201 aa10.32□□□□□ -0.76
PCDH1-207ENST00000514773 SMIM29Q86T20 159 aa10.32□□□□□ -0.76
PCDH1-207ENST00000514773 K7ERJ3 54 aa10.31□□□□□ -0.76
PCDH1-207ENST00000514773 TRIAP1O43715 76 aa10.3□□□□□ -0.76
PCDH1-207ENST00000514773 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
PCDH1-207ENST00000514773 CD164Q04900 197 aa10.27□□□□□ -0.77
PCDH1-207ENST00000514773 RETNLBQ9BQ08 111 aa10.27□□□□□ -0.77
PCDH1-207ENST00000514773 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
PCDH1-207ENST00000514773 LIMD2Q9BT23 127 aa10.26□□□□□ -0.77
PCDH1-207ENST00000514773 LRP2P98164 4655 aa10.25□□□□□ -0.77
PCDH1-207ENST00000514773 FP248Q71RG6 208 aaPredicted RBP10.25□□□□□ -0.77
PCDH1-207ENST00000514773 DNAL4O96015 105 aa10.24□□□□□ -0.77
PCDH1-207ENST00000514773 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
PCDH1-207ENST00000514773 Q6JHZ5 121 aa10.23□□□□□ -0.77
PCDH1-207ENST00000514773 H3BQ85 93 aa10.22□□□□□ -0.77
PCDH1-207ENST00000514773 SCGB1C2P0DMR2 95 aa10.22□□□□□ -0.77
PCDH1-207ENST00000514773 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
PCDH1-207ENST00000514773 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
PCDH1-207ENST00000514773 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
PCDH1-207ENST00000514773 CLEC2BQ92478 149 aa10.2□□□□□ -0.78
PCDH1-207ENST00000514773 FABP2P12104 132 aa10.17□□□□□ -0.78
PCDH1-207ENST00000514773 ORMDL1Q9P0S3 153 aa10.17□□□□□ -0.78
PCDH1-207ENST00000514773 NDUFV3P56181 108 aaKnown RBP10.16□□□□□ -0.78
PCDH1-207ENST00000514773 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
PCDH1-207ENST00000514773 Q5XG85 94 aa10.15□□□□□ -0.78
PCDH1-207ENST00000514773 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
PCDH1-207ENST00000514773 TRACP01848 142 aa10.14□□□□□ -0.79
PCDH1-207ENST00000514773 LPAP08519 4548 aa10.14□□□□□ -0.79
PCDH1-207ENST00000514773 TCL1BO95988 128 aa10.13□□□□□ -0.79
PCDH1-207ENST00000514773 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
PCDH1-207ENST00000514773 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
PCDH1-207ENST00000514773 LST1O00453 97 aa10.12□□□□□ -0.79
PCDH1-207ENST00000514773 BATFQ16520 125 aa10.12□□□□□ -0.79
PCDH1-207ENST00000514773 H3BMG7 143 aa10.11□□□□□ -0.79
PCDH1-207ENST00000514773 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
PCDH1-207ENST00000514773 H3BUT2 72 aa10.1□□□□□ -0.79
PCDH1-207ENST00000514773 LYRM7Q5U5X0 104 aa10.1□□□□□ -0.79
PCDH1-207ENST00000514773 TRBV7-7A0A0K0K1E9 115 aa10.07□□□□□ -0.8
PCDH1-207ENST00000514773 ATXN8Q156A1 80 aa10.07□□□□□ -0.8
PCDH1-207ENST00000514773 UBE2V1Q13404 147 aa10.06□□□□□ -0.8
PCDH1-207ENST00000514773 Q6Q795 121 aa10.05□□□□□ -0.8
PCDH1-207ENST00000514773 TEN1Q86WV5 123 aa10.05□□□□□ -0.8
PCDH1-207ENST00000514773 KRTAP13-3Q3SY46 172 aa10.04□□□□□ -0.8
PCDH1-207ENST00000514773 NAA38Q9BRA0 125 aaKnown RBP10.03□□□□□ -0.8
PCDH1-207ENST00000514773 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
PCDH1-207ENST00000514773 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
PCDH1-207ENST00000514773 C1orf195Q5TG92 126 aa10.02□□□□□ -0.81
PCDH1-207ENST00000514773 SS18L2Q9UHA2 77 aa10.02□□□□□ -0.81
PCDH1-207ENST00000514773 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
PCDH1-207ENST00000514773 BAALC-AS2P0C853 105 aa10□□□□□ -0.81
PCDH1-207ENST00000514773 RNF213Q63HN8 5207 aa9.98□□□□□ -0.81
PCDH1-207ENST00000514773 C9orf118A6NHY6 69 aa9.98□□□□□ -0.81
PCDH1-207ENST00000514773 RBM3P98179 157 aaKnown RBP9.96□□□□□ -0.82
PCDH1-207ENST00000514773 A0A1B0GV72 72 aa9.95□□□□□ -0.82
PCDH1-207ENST00000514773 TAX1BP3O14907 124 aa9.95□□□□□ -0.82
PCDH1-207ENST00000514773 DSCR8Q96T75 97 aa9.95□□□□□ -0.82
PCDH1-207ENST00000514773 TRBV7-4A0A0J9YYF1 115 aa9.94□□□□□ -0.82
PCDH1-207ENST00000514773 A0A087WSZ3 146 aa9.93□□□□□ -0.82
PCDH1-207ENST00000514773 A0A1W2PPM0 123 aa9.93□□□□□ -0.82
PCDH1-207ENST00000514773 A0A1W2PNM2 257 aa9.91□□□□□ -0.82
PCDH1-207ENST00000514773 JMJD7-PLA2G4BH0Y9G9 81 aa9.91□□□□□ -0.82
PCDH1-207ENST00000514773 CCKP06307 115 aa9.91□□□□□ -0.82
PCDH1-207ENST00000514773 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
PCDH1-207ENST00000514773 C9JAW5 83 aa9.89□□□□□ -0.83
PCDH1-207ENST00000514773 C21orf62-AS1Q17RA5 79 aa9.88□□□□□ -0.83
PCDH1-207ENST00000514773 C9orf92A6NGG3 77 aa9.87□□□□□ -0.83
PCDH1-207ENST00000514773 SEC61BP60468 96 aaKnown RBP9.87□□□□□ -0.83
PCDH1-207ENST00000514773 XP32Q5T750 250 aa9.87□□□□□ -0.83
PCDH1-207ENST00000514773 PDE6GP18545 87 aa9.85□□□□□ -0.83
PCDH1-207ENST00000514773 VPS25Q9BRG1 176 aa9.85□□□□□ -0.83
PCDH1-207ENST00000514773 PCP4L1A6NKN8 68 aa9.83□□□□□ -0.84
PCDH1-207ENST00000514773 MUC2Q02817 5179 aa9.83□□□□□ -0.84
PCDH1-207ENST00000514773 H3BT86 120 aa9.82□□□□□ -0.84
PCDH1-207ENST00000514773 SPCS1Q9Y6A9 102 aa9.82□□□□□ -0.84
PCDH1-207ENST00000514773 LOC110117498A0A087WWA1 95 aa9.8□□□□□ -0.84
PCDH1-207ENST00000514773 A0A1B0GW54 56 aa9.8□□□□□ -0.84
PCDH1-207ENST00000514773 Q6ZQT0 140 aa9.77□□□□□ -0.85
PCDH1-207ENST00000514773 OBSCN-AS1Q96MR7 158 aa9.77□□□□□ -0.85
PCDH1-207ENST00000514773 Q96NJ1 140 aa9.77□□□□□ -0.85
PCDH1-207ENST00000514773 A0A0U1RQV1 116 aa9.76□□□□□ -0.85
PCDH1-207ENST00000514773 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
PCDH1-207ENST00000514773 MUC17Q685J3 4493 aa9.75□□□□□ -0.85
PCDH1-207ENST00000514773 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
PCDH1-207ENST00000514773 IGKV4-1P06312 121 aa9.74□□□□□ -0.85
PCDH1-207ENST00000514773 LINC00472Q9H8W2 130 aa9.73□□□□□ -0.85
PCDH1-207ENST00000514773 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
PCDH1-207ENST00000514773 K7EP34 96 aa9.7□□□□□ -0.86
PCDH1-207ENST00000514773 J3KT08 172 aa9.69□□□□□ -0.86
PCDH1-207ENST00000514773 RPL37P61927 97 aaKnown RBP9.69□□□□□ -0.86
PCDH1-207ENST00000514773 GTF2H5Q6ZYL4 71 aa9.69□□□□□ -0.86
PCDH1-207ENST00000514773 DEFB116Q30KQ4 102 aa9.67□□□□□ -0.86
PCDH1-207ENST00000514773 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
PCDH1-207ENST00000514773 LINC00313P59037 77 aa9.65□□□□□ -0.86
PCDH1-207ENST00000514773 Q75L30 129 aa9.64□□□□□ -0.87
PCDH1-207ENST00000514773 NREPQ16612 68 aa9.63□□□□□ -0.87
PCDH1-207ENST00000514773 ATP11AUNQ6ZP68 121 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms