RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 SPINK1P00995 79 aa4.93□□□□□ -1.62
HERC4-214ENST00000513996 HSD52Q0P140 79 aa4.93□□□□□ -1.62
HERC4-214ENST00000513996 SCGB1D4Q6XE38 83 aa4.93□□□□□ -1.62
HERC4-214ENST00000513996 MUSTN1Q8IVN3 82 aa4.93□□□□□ -1.62
HERC4-214ENST00000513996 M0R143 59 aa4.92□□□□□ -1.62
HERC4-214ENST00000513996 HINT1P49773 126 aaPredicted RBP4.92□□□□□ -1.62
HERC4-214ENST00000513996 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
HERC4-214ENST00000513996 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 IFITM1P13164 125 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 SPRR1BP22528 89 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 ELOF1P60002 83 aaKnown RBP4.91□□□□□ -1.62
HERC4-214ENST00000513996 Q8N377 158 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 COPS9Q8WXC6 57 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 CBY1Q9Y3M2 126 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 MUC2Q02817 5179 aa4.91□□□□□ -1.62
HERC4-214ENST00000513996 COX7BP24311 80 aa4.9□□□□□ -1.63
HERC4-214ENST00000513996 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.63
HERC4-214ENST00000513996 FP248Q71RG6 208 aaPredicted RBP4.9□□□□□ -1.63
HERC4-214ENST00000513996 HIST1H4GQ99525 98 aa4.9□□□□□ -1.63
HERC4-214ENST00000513996 DHRS4-AS1Q9P1J3 65 aa4.9□□□□□ -1.63
HERC4-214ENST00000513996 BVES-AS1Q5T3Y7 98 aa4.89□□□□□ -1.63
HERC4-214ENST00000513996 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
HERC4-214ENST00000513996 CEND1Q8N111 149 aa4.89□□□□□ -1.63
HERC4-214ENST00000513996 A6NDN8 102 aa4.88□□□□□ -1.63
HERC4-214ENST00000513996 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
HERC4-214ENST00000513996 SNHG12Q9BXW3 62 aa4.88□□□□□ -1.63
HERC4-214ENST00000513996 TRBV7-6A0A0J9YX20 115 aa4.87□□□□□ -1.63
HERC4-214ENST00000513996 A0A1B0GWB2 263 aa4.87□□□□□ -1.63
HERC4-214ENST00000513996 LINC01547P58512 204 aaPredicted RBP4.87□□□□□ -1.63
HERC4-214ENST00000513996 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
HERC4-214ENST00000513996 DEFB105AQ8NG35 78 aa4.87□□□□□ -1.63
HERC4-214ENST00000513996 SMIM11BQ8TCY0 68 aa4.87□□□□□ -1.63
HERC4-214ENST00000513996 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
HERC4-214ENST00000513996 SLC25A20O43772 301 aa4.86□□□□□ -1.63
HERC4-214ENST00000513996 Q1RN00 199 aa4.86□□□□□ -1.63
HERC4-214ENST00000513996 COL5A1-AS1Q5SY13 56 aa4.86□□□□□ -1.63
HERC4-214ENST00000513996 LAMTOR3Q9UHA4 124 aa4.86□□□□□ -1.63
HERC4-214ENST00000513996 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
HERC4-214ENST00000513996 HRCT1Q6UXD1 115 aa4.85□□□□□ -1.63
HERC4-214ENST00000513996 IGLV5-48A0A075B6I7 105 aa4.84□□□□□ -1.63
HERC4-214ENST00000513996 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
HERC4-214ENST00000513996 A0A0G2JQZ4 141 aa4.84□□□□□ -1.63
HERC4-214ENST00000513996 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
HERC4-214ENST00000513996 FXYD2P54710 66 aa4.84□□□□□ -1.63
HERC4-214ENST00000513996 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
HERC4-214ENST00000513996 CFC1BP0CG36 223 aa4.82□□□□□ -1.64
HERC4-214ENST00000513996 CFC1P0CG37 223 aa4.82□□□□□ -1.64
HERC4-214ENST00000513996 ASB16-AS1Q495Z4 193 aa4.82□□□□□ -1.64
HERC4-214ENST00000513996 PRO1854Q9UHT4 67 aa4.82□□□□□ -1.64
HERC4-214ENST00000513996 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
HERC4-214ENST00000513996 BATFQ16520 125 aa4.81□□□□□ -1.64
HERC4-214ENST00000513996 LINC00575Q6W349 94 aa4.81□□□□□ -1.64
HERC4-214ENST00000513996 NHP2Q9NX24 153 aaKnown RBP4.81□□□□□ -1.64
HERC4-214ENST00000513996 H7C2G1 150 aa4.8□□□□□ -1.64
HERC4-214ENST00000513996 TAX1BP3O14907 124 aa4.8□□□□□ -1.64
HERC4-214ENST00000513996 CD164Q04900 197 aa4.8□□□□□ -1.64
HERC4-214ENST00000513996 A0A0U1RQV1 116 aa4.79□□□□□ -1.64
HERC4-214ENST00000513996 RAB37Q96AX2 223 aa4.79□□□□□ -1.64
HERC4-214ENST00000513996 VAMP3Q15836 100 aa4.78□□□□□ -1.64
HERC4-214ENST00000513996 LIMD2Q9BT23 127 aa4.78□□□□□ -1.64
HERC4-214ENST00000513996 hADV29S1A0JD25 119 aa4.77□□□□□ -1.65
HERC4-214ENST00000513996 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
HERC4-214ENST00000513996 C1orf195Q5TG92 126 aa4.77□□□□□ -1.65
HERC4-214ENST00000513996 Q5XG85 94 aa4.77□□□□□ -1.65
HERC4-214ENST00000513996 Q6ZQY7 126 aa4.77□□□□□ -1.65
HERC4-214ENST00000513996 C9orf92A6NGG3 77 aa4.76□□□□□ -1.65
HERC4-214ENST00000513996 K7ERJ3 54 aa4.76□□□□□ -1.65
HERC4-214ENST00000513996 LYRM7Q5U5X0 104 aa4.75□□□□□ -1.65
HERC4-214ENST00000513996 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
HERC4-214ENST00000513996 A0A1W2PPM0 123 aa4.74□□□□□ -1.65
HERC4-214ENST00000513996 COX6CP09669 75 aa4.74□□□□□ -1.65
HERC4-214ENST00000513996 TRBV20-1A0A075B6N2 111 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 H0YGX0 51 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 H3BUT2 72 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 FABP2P12104 132 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 OCIAD2Q56VL3 154 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.73□□□□□ -1.65
HERC4-214ENST00000513996 FAM218AQ96MZ4 157 aa4.73□□□□□ -1.65
HERC4-214ENST00000513996 PCOTHQ58A44 107 aa4.72□□□□□ -1.65
HERC4-214ENST00000513996 F8WEM9 126 aa4.71□□□□□ -1.66
HERC4-214ENST00000513996 PSMB2P49721 201 aa4.71□□□□□ -1.66
HERC4-214ENST00000513996 TRBV7-7A0A0K0K1E9 115 aa4.7□□□□□ -1.66
HERC4-214ENST00000513996 A0A1B0GV90 55 aa4.7□□□□□ -1.66
HERC4-214ENST00000513996 A0A1B0GX51 115 aa4.7□□□□□ -1.66
HERC4-214ENST00000513996 SCGB1C2P0DMR2 95 aa4.7□□□□□ -1.66
HERC4-214ENST00000513996 Q6JHZ5 121 aa4.7□□□□□ -1.66
HERC4-214ENST00000513996 GTF2H5Q6ZYL4 71 aa4.7□□□□□ -1.66
HERC4-214ENST00000513996 K7EP34 96 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 TCL1BO95988 128 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 UBE2V1Q13404 147 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 CLEC2BQ92478 149 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 SPCS1Q9Y6A9 102 aa4.69□□□□□ -1.66
HERC4-214ENST00000513996 TRACP01848 142 aa4.68□□□□□ -1.66
HERC4-214ENST00000513996 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
HERC4-214ENST00000513996 NAA38Q9BRA0 125 aaKnown RBP4.68□□□□□ -1.66
HERC4-214ENST00000513996 LST1O00453 97 aa4.67□□□□□ -1.66
HERC4-214ENST00000513996 SNCGO76070 127 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms