RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 Q5W150 140 aa5.39□□□□□ -1.55
VCAN-208ENST00000512590 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
VCAN-208ENST00000512590 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
VCAN-208ENST00000512590 BPTFQ12830 3046 aa5.38□□□□□ -1.55
VCAN-208ENST00000512590 CEP295Q9C0D2 2601 aa5.35□□□□□ -1.55
VCAN-208ENST00000512590 A8MUU9 505 aa5.35□□□□□ -1.55
VCAN-208ENST00000512590 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
VCAN-208ENST00000512590 SMCPP49901 116 aaPredicted RBP5.35□□□□□ -1.55
VCAN-208ENST00000512590 MTORP42345 2549 aa5.35□□□□□ -1.55
VCAN-208ENST00000512590 KLK9Q2XQG4 91 aa5.34□□□□□ -1.55
VCAN-208ENST00000512590 VPS13AQ96RL7 3174 aa5.34□□□□□ -1.56
VCAN-208ENST00000512590 Q8NDZ9 215 aa5.32□□□□□ -1.56
VCAN-208ENST00000512590 ANKRD11Q6UB99 2663 aaPredicted RBP5.32□□□□□ -1.56
VCAN-208ENST00000512590 TNP1P09430 55 aa5.32□□□□□ -1.56
VCAN-208ENST00000512590 PCSK5Q92824 1860 aa5.31□□□□□ -1.56
VCAN-208ENST00000512590 LAMA1P25391 3075 aa5.31□□□□□ -1.56
VCAN-208ENST00000512590 PKD1L2Q7Z442 2459 aa5.31□□□□□ -1.56
VCAN-208ENST00000512590 PRRC2CQ9Y520 2896 aaKnown RBP5.29□□□□□ -1.56
VCAN-208ENST00000512590 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
VCAN-208ENST00000512590 KRTAP10-8P60410 259 aa5.29□□□□□ -1.56
VCAN-208ENST00000512590 SPTBN5Q9NRC6 3674 aaKnown RBP5.28□□□□□ -1.56
VCAN-208ENST00000512590 WDFY4Q6ZS81 3184 aa5.28□□□□□ -1.56
VCAN-208ENST00000512590 CFAP54Q96N23 3096 aa5.28□□□□□ -1.56
VCAN-208ENST00000512590 PANO1I0J062 215 aa5.28□□□□□ -1.56
VCAN-208ENST00000512590 USP9YO00507 2555 aaPredicted RBP5.27□□□□□ -1.57
VCAN-208ENST00000512590 FLG2Q5D862 2391 aaPredicted RBP5.26□□□□□ -1.57
VCAN-208ENST00000512590 FASNP49327 2511 aaKnown RBP5.25□□□□□ -1.57
VCAN-208ENST00000512590 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
VCAN-208ENST00000512590 Q6ZR54 194 aa5.23□□□□□ -1.57
VCAN-208ENST00000512590 Q75L30 129 aa5.23□□□□□ -1.57
VCAN-208ENST00000512590 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
VCAN-208ENST00000512590 COL6A3P12111 3177 aa5.22□□□□□ -1.57
VCAN-208ENST00000512590 A0A1B0GVY2 172 aa5.22□□□□□ -1.57
VCAN-208ENST00000512590 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.57
VCAN-208ENST00000512590 WDFY3Q8IZQ1 3526 aa5.21□□□□□ -1.58
VCAN-208ENST00000512590 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
VCAN-208ENST00000512590 REV3LO60673 3130 aa5.21□□□□□ -1.58
VCAN-208ENST00000512590 POLQO75417 2590 aa5.2□□□□□ -1.58
VCAN-208ENST00000512590 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
VCAN-208ENST00000512590 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
VCAN-208ENST00000512590 EIF4EBP3O60516 100 aaPredicted RBP5.19□□□□□ -1.58
VCAN-208ENST00000512590 SPTBN4Q9H254 2564 aa5.19□□□□□ -1.58
VCAN-208ENST00000512590 FRYLO94915 3013 aa5.19□□□□□ -1.58
VCAN-208ENST00000512590 CHD9Q3L8U1 2897 aa5.18□□□□□ -1.58
VCAN-208ENST00000512590 SETD2Q9BYW2 2564 aaPredicted RBP5.17□□□□□ -1.58
VCAN-208ENST00000512590 ANKRD17O75179 2603 aaKnown RBP5.17□□□□□ -1.58
VCAN-208ENST00000512590 KRTAP1-5Q9BYS1 174 aa5.16□□□□□ -1.58
VCAN-208ENST00000512590 KRTAP21-3Q3LHN1 58 aa5.15□□□□□ -1.58
VCAN-208ENST00000512590 FREM2Q5SZK8 3169 aa5.15□□□□□ -1.59
VCAN-208ENST00000512590 CR1P17927 2039 aa5.15□□□□□ -1.59
VCAN-208ENST00000512590 OCR1Q9BZK8 76 aa5.14□□□□□ -1.59
VCAN-208ENST00000512590 RPS29P62273 56 aaKnown RBP5.11□□□□□ -1.59
VCAN-208ENST00000512590 LINC00472Q9H8W2 130 aa5.11□□□□□ -1.59
VCAN-208ENST00000512590 A0A087X002 238 aa5.11□□□□□ -1.59
VCAN-208ENST00000512590 EPG5Q9HCE0 2579 aa5.11□□□□□ -1.59
VCAN-208ENST00000512590 ASPMQ8IZT6 3477 aa5.11□□□□□ -1.59
VCAN-208ENST00000512590 KRTAP26-1Q6PEX3 210 aa5.09□□□□□ -1.59
VCAN-208ENST00000512590 H3BS24 57 aa5.09□□□□□ -1.6
VCAN-208ENST00000512590 SPRR1AP35321 89 aa5.08□□□□□ -1.6
VCAN-208ENST00000512590 MGAM2Q2M2H8 2515 aa5.08□□□□□ -1.6
VCAN-208ENST00000512590 MUC3AQ02505 3323 aa5.08□□□□□ -1.6
VCAN-208ENST00000512590 KRTAP16-1A8MUX0 517 aa5.07□□□□□ -1.6
VCAN-208ENST00000512590 FRYQ5TBA9 3013 aa5.06□□□□□ -1.6
VCAN-208ENST00000512590 DMDP11532 3685 aa5.05□□□□□ -1.6
VCAN-208ENST00000512590 TRANK1O15050 2925 aa5.04□□□□□ -1.6
VCAN-208ENST00000512590 BOD1L1Q8NFC6 3051 aa5.02□□□□□ -1.61
VCAN-208ENST00000512590 LOC400499M0QZD8 3231 aa5.01□□□□□ -1.61
VCAN-208ENST00000512590 KRTAP4-16G5E9R7 235 aaPredicted RBP4.99□□□□□ -1.61
VCAN-208ENST00000512590 A8MU10 97 aa4.98□□□□□ -1.61
VCAN-208ENST00000512590 NBEAQ8NFP9 2946 aa4.97□□□□□ -1.61
VCAN-208ENST00000512590 USP24Q9UPU5 2620 aa4.97□□□□□ -1.61
VCAN-208ENST00000512590 MGAQ8IWI9 3026 aa4.97□□□□□ -1.61
VCAN-208ENST00000512590 DCHS1Q96JQ0 3298 aa4.97□□□□□ -1.61
VCAN-208ENST00000512590 DSPP15924 2871 aaKnown RBP4.96□□□□□ -1.62
VCAN-208ENST00000512590 CFAP47Q6ZTR5 3102 aa4.96□□□□□ -1.62
VCAN-208ENST00000512590 Q5VV11 94 aa4.95□□□□□ -1.62
VCAN-208ENST00000512590 ZFHX4Q86UP3 3567 aa4.94□□□□□ -1.62
VCAN-208ENST00000512590 HECTD1Q9ULT8 2610 aa4.94□□□□□ -1.62
VCAN-208ENST00000512590 FLNBO75369 2602 aaKnown RBP4.94□□□□□ -1.62
VCAN-208ENST00000512590 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
VCAN-208ENST00000512590 LAMA5O15230 3695 aa4.93□□□□□ -1.62
VCAN-208ENST00000512590 ATMQ13315 3056 aa4.91□□□□□ -1.62
VCAN-208ENST00000512590 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
VCAN-208ENST00000512590 MAP1AP78559 2803 aaPredicted RBP4.91□□□□□ -1.62
VCAN-208ENST00000512590 STAB1Q9NY15 2570 aa4.9□□□□□ -1.62
VCAN-208ENST00000512590 COL12A1Q99715 3063 aa4.9□□□□□ -1.63
VCAN-208ENST00000512590 ASB16-AS1Q495Z4 193 aa4.89□□□□□ -1.63
VCAN-208ENST00000512590 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
VCAN-208ENST00000512590 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
VCAN-208ENST00000512590 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
VCAN-208ENST00000512590 NDUFAF8A1L188 74 aa4.84□□□□□ -1.64
VCAN-208ENST00000512590 XP32Q5T750 250 aa4.83□□□□□ -1.64
VCAN-208ENST00000512590 DMXL2Q8TDJ6 3036 aa4.83□□□□□ -1.64
VCAN-208ENST00000512590 TPRXLQ17RH7 258 aa4.83□□□□□ -1.64
VCAN-208ENST00000512590 ADGRG4Q8IZF6 3080 aa4.82□□□□□ -1.64
VCAN-208ENST00000512590 DMXL1Q9Y485 3027 aa4.81□□□□□ -1.64
VCAN-208ENST00000512590 MAST4O15021 2626 aa4.81□□□□□ -1.64
VCAN-208ENST00000512590 DMBT1Q9UGM3 2413 aaPredicted RBP4.8□□□□□ -1.64
VCAN-208ENST00000512590 ATRQ13535 2644 aa4.8□□□□□ -1.64
VCAN-208ENST00000512590 FLNAP21333 2647 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms