RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 USF3Q68DE3 2245 aa2.28□□□□□ -2.04
CHD1-208ENST00000512392 DNAH14Q0VDD8 3507 aa2.28□□□□□ -2.04
CHD1-208ENST00000512392 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
CHD1-208ENST00000512392 ROS1P08922 2347 aa2.27□□□□□ -2.05
CHD1-208ENST00000512392 KLK9Q2XQG4 91 aa2.27□□□□□ -2.05
CHD1-208ENST00000512392 Q5VSD8 79 aa2.27□□□□□ -2.05
CHD1-208ENST00000512392 SZT2Q5T011 3432 aa2.26□□□□□ -2.05
CHD1-208ENST00000512392 RANBP2P49792 3224 aaKnown RBP2.26□□□□□ -2.05
CHD1-208ENST00000512392 SPRR1BP22528 89 aa2.26□□□□□ -2.05
CHD1-208ENST00000512392 A0A0C4DFX4 3053 aa2.26□□□□□ -2.05
CHD1-208ENST00000512392 ZNF462Q96JM2 2506 aa2.26□□□□□ -2.05
CHD1-208ENST00000512392 VCANP13611 3396 aa2.25□□□□□ -2.05
CHD1-208ENST00000512392 J3QKU1 62 aa2.25□□□□□ -2.05
CHD1-208ENST00000512392 SPEGQ15772 3267 aa2.25□□□□□ -2.05
CHD1-208ENST00000512392 TRANK1O15050 2925 aa2.25□□□□□ -2.05
CHD1-208ENST00000512392 CHD9Q3L8U1 2897 aa2.24□□□□□ -2.05
CHD1-208ENST00000512392 CD52P31358 61 aa2.24□□□□□ -2.05
CHD1-208ENST00000512392 RP1L1Q8IWN7 2480 aaPredicted RBP2.24□□□□□ -2.05
CHD1-208ENST00000512392 TRIOO75962 3097 aa2.24□□□□□ -2.05
CHD1-208ENST00000512392 PRUNE2Q8WUY3 3088 aa2.24□□□□□ -2.05
CHD1-208ENST00000512392 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
CHD1-208ENST00000512392 MYO15AQ9UKN7 3530 aa2.23□□□□□ -2.05
CHD1-208ENST00000512392 LAMA1P25391 3075 aa2.23□□□□□ -2.05
CHD1-208ENST00000512392 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
CHD1-208ENST00000512392 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
CHD1-208ENST00000512392 CEP290O15078 2479 aa2.22□□□□□ -2.05
CHD1-208ENST00000512392 SPTBN2O15020 2390 aa2.21□□□□□ -2.05
CHD1-208ENST00000512392 KRTAP12-3P60328 96 aa2.21□□□□□ -2.05
CHD1-208ENST00000512392 WFDC10BQ8IUB3 73 aa2.21□□□□□ -2.05
CHD1-208ENST00000512392 SPTBN5Q9NRC6 3674 aaKnown RBP2.21□□□□□ -2.06
CHD1-208ENST00000512392 IGF2RP11717 2491 aa2.21□□□□□ -2.06
CHD1-208ENST00000512392 SPTBN1Q01082 2364 aaKnown RBP2.2□□□□□ -2.06
CHD1-208ENST00000512392 WNK2Q9Y3S1 2297 aa2.2□□□□□ -2.06
CHD1-208ENST00000512392 KNL1Q8NG31 2342 aa2.2□□□□□ -2.06
CHD1-208ENST00000512392 DSPP15924 2871 aaKnown RBP2.2□□□□□ -2.06
CHD1-208ENST00000512392 Q9Y3F1 56 aa2.19□□□□□ -2.06
CHD1-208ENST00000512392 CACNA1HO95180 2353 aa2.19□□□□□ -2.06
CHD1-208ENST00000512392 CFAP54Q96N23 3096 aa2.19□□□□□ -2.06
CHD1-208ENST00000512392 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
CHD1-208ENST00000512392 WDR87Q6ZQQ6 2873 aa2.18□□□□□ -2.06
CHD1-208ENST00000512392 VPS13AQ96RL7 3174 aa2.18□□□□□ -2.06
CHD1-208ENST00000512392 WDFY3Q8IZQ1 3526 aa2.17□□□□□ -2.06
CHD1-208ENST00000512392 KAAG1Q9UBP8 84 aa2.17□□□□□ -2.06
CHD1-208ENST00000512392 CELSR2Q9HCU4 2923 aa2.16□□□□□ -2.06
CHD1-208ENST00000512392 GVINP1Q7Z2Y8 2422 aa2.16□□□□□ -2.06
CHD1-208ENST00000512392 FRYLO94915 3013 aa2.15□□□□□ -2.06
CHD1-208ENST00000512392 PKDREJQ9NTG1 2253 aa2.15□□□□□ -2.07
CHD1-208ENST00000512392 FREM2Q5SZK8 3169 aa2.14□□□□□ -2.07
CHD1-208ENST00000512392 ZNF292O60281 2723 aa2.14□□□□□ -2.07
CHD1-208ENST00000512392 STATHP02808 62 aa2.14□□□□□ -2.07
CHD1-208ENST00000512392 WDFY4Q6ZS81 3184 aa2.13□□□□□ -2.07
CHD1-208ENST00000512392 MEGF8Q7Z7M0 2845 aa2.13□□□□□ -2.07
CHD1-208ENST00000512392 MUC3AQ02505 3323 aa2.12□□□□□ -2.07
CHD1-208ENST00000512392 CELSR3Q9NYQ7 3312 aa2.12□□□□□ -2.07
CHD1-208ENST00000512392 WT1-ASQ06250 92 aa2.12□□□□□ -2.07
CHD1-208ENST00000512392 DMDP11532 3685 aa2.12□□□□□ -2.07
CHD1-208ENST00000512392 COL6A3P12111 3177 aa2.12□□□□□ -2.07
CHD1-208ENST00000512392 TNRC18O15417 2968 aaPredicted RBP2.11□□□□□ -2.07
CHD1-208ENST00000512392 TPRP12270 2363 aaKnown RBP2.11□□□□□ -2.07
CHD1-208ENST00000512392 POLQO75417 2590 aa2.11□□□□□ -2.07
CHD1-208ENST00000512392 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CHD1-208ENST00000512392 PCNX1Q96RV3 2341 aa2.1□□□□□ -2.07
CHD1-208ENST00000512392 COX14Q96I36 57 aa2.1□□□□□ -2.07
CHD1-208ENST00000512392 TTC28Q96AY4 2481 aa2.09□□□□□ -2.07
CHD1-208ENST00000512392 TTTY10Q9BZA0 68 aa2.09□□□□□ -2.07
CHD1-208ENST00000512392 MUC6Q6W4X9 2439 aa2.09□□□□□ -2.07
CHD1-208ENST00000512392 FRYQ5TBA9 3013 aa2.08□□□□□ -2.08
CHD1-208ENST00000512392 ABCA12Q86UK0 2595 aa2.07□□□□□ -2.08
CHD1-208ENST00000512392 PRRC2CQ9Y520 2896 aaKnown RBP2.07□□□□□ -2.08
CHD1-208ENST00000512392 IGLV5-48A0A075B6I7 105 aa2.07□□□□□ -2.08
CHD1-208ENST00000512392 RPL39P62891 51 aaKnown RBP2.07□□□□□ -2.08
CHD1-208ENST00000512392 DEFB110Q30KQ9 67 aa2.07□□□□□ -2.08
CHD1-208ENST00000512392 ASPMQ8IZT6 3477 aa2.06□□□□□ -2.08
CHD1-208ENST00000512392 SPENQ96T58 3664 aaKnown RBP2.06□□□□□ -2.08
CHD1-208ENST00000512392 LOC400499M0QZD8 3231 aa2.06□□□□□ -2.08
CHD1-208ENST00000512392 FAM186AA6NE01 2351 aa2.06□□□□□ -2.08
CHD1-208ENST00000512392 H3BSH0 61 aa2.05□□□□□ -2.08
CHD1-208ENST00000512392 H0YGG7 62 aa2.05□□□□□ -2.08
CHD1-208ENST00000512392 CFAP47Q6ZTR5 3102 aa2.04□□□□□ -2.08
CHD1-208ENST00000512392 ARHGAP5-AS1Q96IT6 56 aa2.04□□□□□ -2.08
CHD1-208ENST00000512392 S4R3F8 94 aa2.04□□□□□ -2.08
CHD1-208ENST00000512392 NCOR1O75376 2440 aa2.04□□□□□ -2.08
CHD1-208ENST00000512392 F8P00451 2351 aa2.03□□□□□ -2.08
CHD1-208ENST00000512392 BOD1L1Q8NFC6 3051 aa2.03□□□□□ -2.08
CHD1-208ENST00000512392 PRLHP81277 87 aa2.03□□□□□ -2.08
CHD1-208ENST00000512392 NBEAQ8NFP9 2946 aa2.03□□□□□ -2.08
CHD1-208ENST00000512392 MMP24-AS1A0A0U1RRL7 71 aa2.03□□□□□ -2.08
CHD1-208ENST00000512392 LINC01590Q5TEZ4 76 aa2.03□□□□□ -2.08
CHD1-208ENST00000512392 DMXL1Q9Y485 3027 aa2.02□□□□□ -2.09
CHD1-208ENST00000512392 ZFHX4Q86UP3 3567 aa2.02□□□□□ -2.09
CHD1-208ENST00000512392 CSMD3Q7Z407 3707 aa2.02□□□□□ -2.09
CHD1-208ENST00000512392 POLR2KP53803 58 aaKnown RBP2.01□□□□□ -2.09
CHD1-208ENST00000512392 DCHS1Q96JQ0 3298 aa2.01□□□□□ -2.09
CHD1-208ENST00000512392 HELZ2Q9BYK8 2649 aaKnown RBP2.01□□□□□ -2.09
CHD1-208ENST00000512392 ABCA2Q9BZC7 2435 aa2.01□□□□□ -2.09
CHD1-208ENST00000512392 DEFB133Q30KQ1 61 aa2.01□□□□□ -2.09
CHD1-208ENST00000512392 RPL39LQ96EH5 51 aaKnown RBP2□□□□□ -2.09
CHD1-208ENST00000512392 BDP1A6H8Y1 2624 aa1.99□□□□□ -2.09
CHD1-208ENST00000512392 LAMA5O15230 3695 aa1.99□□□□□ -2.09
CHD1-208ENST00000512392 SMG1Q96Q15 3661 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms