RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 NIPBLQ6KC79 2804 aaeCLIP-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 ACACAQ13085 2346 aa-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 CCDC88BA6NC98 1476 aa-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 CCDC18Q5T9S5 1454 aa-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 ALMS1Q8TCU4 4167 aa-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 ENHOQ6UWT2 76 aa-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 FAT2Q9NYQ8 4349 aa-0.26□□□□□ -2.45
TRAPPC11-207ENST00000511409 DSPP15924 2871 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 SMARCA2P51531 1590 aa-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 NWD1Q149M9 1564 aa-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 ANKRD50Q9ULJ7 1429 aa-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 KCNQ1DNQ9H478 68 aa-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 HYDINQ4G0P3 5121 aa-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 NBASA2RRP1 2371 aa-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.27□□□□□ -2.45
TRAPPC11-207ENST00000511409 ABCC1P33527 1531 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 NBPF19A0A087WUL8 3843 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 CEP290O15078 2479 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 PKD1L2Q7Z442 2459 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 NEBP20929 6669 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 BSNQ9UPA5 3926 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 ETDCA0A1B0GVM5 59 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 S4R3F8 94 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 SUPT6HQ7KZ85 1726 aaKnown RBP-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 LRP1BQ9NZR2 4599 aa-0.28□□□□□ -2.45
TRAPPC11-207ENST00000511409 MED14O60244 1454 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 ERVK-7P63135 1459 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 LTN1O94822 1766 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 RYR3Q15413 4870 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 UBR1Q8IWV7 1749 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 LAMA2P24043 3122 aaKnown RBP-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 MT4P47944 62 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 KRTAP20-2Q3LI61 65 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 DEFB106AQ8N104 65 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 SPRR2FQ96RM1 72 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 DEPDC5O75140 1603 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 MAP3K4Q9Y6R4 1608 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 ANKRD11Q6UB99 2663 aaPredicted RBP-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 DIP2BQ9P265 1576 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 SVEP1Q4LDE5 3571 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 RALGAPBQ86X10 1494 aa-0.29□□□□□ -2.46
TRAPPC11-207ENST00000511409 FAM186AA6NE01 2351 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 ANKARQ7Z5J8 1434 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 DOT1LQ8TEK3 1739 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 COL6A5A8TX70 2615 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 WIZO95785 1651 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 WT1-ASQ06250 92 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 ATXN8Q156A1 80 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 MINOS1Q5TGZ0 78 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 GNG13Q9P2W3 67 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 FLGP20930 4061 aaPredicted RBP-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 MAGI3Q5TCQ9 1506 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 CEP295Q9C0D2 2601 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 PPLO60437 1756 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 KIAA1109Q2LD37 5005 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 LRRK2Q5S007 2527 aa-0.3□□□□□ -2.46
TRAPPC11-207ENST00000511409 UBR4Q5T4S7 5183 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 TMEM131LA2VDJ0 1609 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 PIK3C2BO00750 1634 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 UTP20O75691 2785 aaKnown RBP-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 MTORP42345 2549 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 EPPK1P58107 5090 aaKnown RBP-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 RYR1P21817 5038 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 GCN1Q92616 2671 aaKnown RBP-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 DEFB110Q30KQ9 67 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 POLR1AO95602 1720 aaPredicted RBP-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 C4AP0C0L4 1744 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 C4BP0C0L5 1744 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 HFM1A2PYH4 1435 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 HTTP42858 3142 aa-0.31□□□□□ -2.46
TRAPPC11-207ENST00000511409 PLXNC1O60486 1568 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 RB1CC1Q8TDY2 1594 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 ARFGEF2Q9Y6D5 1785 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 TNRC18O15417 2968 aaPredicted RBP-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 KDM5DQ9BY66 1539 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 DCAF1Q9Y4B6 1507 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 PDCD5O14737 125 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 ZZEF1O43149 2961 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 ITPR1Q14643 2758 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 NESP48681 1621 aa-0.32□□□□□ -2.46
TRAPPC11-207ENST00000511409 TIAM2Q8IVF5 1701 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 ZNF831Q5JPB2 1677 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 CFAP46Q8IYW2 2715 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 COL12A1Q99715 3063 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 ARHGAP35Q9NRY4 1499 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 STARD9Q9P2P6 4700 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 H3BUA1 57 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 SMCO4Q9NRQ5 59 aa-0.33□□□□□ -2.46
TRAPPC11-207ENST00000511409 LAMA1P25391 3075 aa-0.34□□□□□ -2.46
TRAPPC11-207ENST00000511409 C6orf48Q9UBA6 75 aa-0.34□□□□□ -2.46
TRAPPC11-207ENST00000511409 HILPDAQ9Y5L2 63 aa-0.34□□□□□ -2.46
TRAPPC11-207ENST00000511409 REV3LO60673 3130 aa-0.34□□□□□ -2.46
TRAPPC11-207ENST00000511409 RYR2Q92736 4967 aa-0.35□□□□□ -2.46
TRAPPC11-207ENST00000511409 MYO9AB2RTY4 2548 aa-0.35□□□□□ -2.47
TRAPPC11-207ENST00000511409 NBEAQ8NFP9 2946 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms