RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 DEFB103AP81534 67 aa2.29□□□□□ -2.04
DDX4-209ENST00000509312 USMG5Q96IX5 58 aa2.29□□□□□ -2.04
DDX4-209ENST00000509312 FBN3Q75N90 2809 aa2.28□□□□□ -2.04
DDX4-209ENST00000509312 TECTAO75443 2155 aa2.28□□□□□ -2.04
DDX4-209ENST00000509312 FRYLO94915 3013 aa2.28□□□□□ -2.04
DDX4-209ENST00000509312 G3V318 75 aa2.28□□□□□ -2.04
DDX4-209ENST00000509312 ITPR1Q14643 2758 aa2.28□□□□□ -2.04
DDX4-209ENST00000509312 LRRC37AA6NMS7 1700 aa2.28□□□□□ -2.05
DDX4-209ENST00000509312 CNOT1A5YKK6 2376 aaKnown RBP2.28□□□□□ -2.05
DDX4-209ENST00000509312 DSPP15924 2871 aaKnown RBP2.28□□□□□ -2.05
DDX4-209ENST00000509312 PCOTHQ58A44 107 aa2.27□□□□□ -2.05
DDX4-209ENST00000509312 IGSF10Q6WRI0 2623 aa2.27□□□□□ -2.05
DDX4-209ENST00000509312 NCOA6Q14686 2063 aaPredicted RBP2.27□□□□□ -2.05
DDX4-209ENST00000509312 FREM1Q5H8C1 2179 aa2.26□□□□□ -2.05
DDX4-209ENST00000509312 SPTAN1Q13813 2472 aaKnown RBP2.26□□□□□ -2.05
DDX4-209ENST00000509312 UBR5O95071 2799 aaPredicted RBP2.26□□□□□ -2.05
DDX4-209ENST00000509312 IGF2RP11717 2491 aa2.25□□□□□ -2.05
DDX4-209ENST00000509312 DUOX1Q9NRD9 1551 aa2.25□□□□□ -2.05
DDX4-209ENST00000509312 SPTA1P02549 2419 aa2.25□□□□□ -2.05
DDX4-209ENST00000509312 RPL37P61927 97 aaKnown RBP2.25□□□□□ -2.05
DDX4-209ENST00000509312 COX6B2Q6YFQ2 88 aa2.25□□□□□ -2.05
DDX4-209ENST00000509312 LOC400499M0QZD8 3231 aa2.25□□□□□ -2.05
DDX4-209ENST00000509312 KALRNO60229 2985 aa2.24□□□□□ -2.05
DDX4-209ENST00000509312 PIGYQ3MUY2 71 aa2.24□□□□□ -2.05
DDX4-209ENST00000509312 DDX60Q8IY21 1712 aaKnown RBP2.24□□□□□ -2.05
DDX4-209ENST00000509312 FN1P02751 2386 aaKnown RBP2.24□□□□□ -2.05
DDX4-209ENST00000509312 C2CD3Q4AC94 2353 aa2.24□□□□□ -2.05
DDX4-209ENST00000509312 FBN2P35556 2912 aa2.23□□□□□ -2.05
DDX4-209ENST00000509312 WDFY3Q8IZQ1 3526 aa2.23□□□□□ -2.05
DDX4-209ENST00000509312 RELNP78509 3460 aa2.23□□□□□ -2.05
DDX4-209ENST00000509312 OTOGLQ3ZCN5 2332 aa2.23□□□□□ -2.05
DDX4-209ENST00000509312 CCL22O00626 93 aa2.22□□□□□ -2.05
DDX4-209ENST00000509312 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
DDX4-209ENST00000509312 MED13LQ71F56 2210 aa2.22□□□□□ -2.05
DDX4-209ENST00000509312 LAMA5O15230 3695 aa2.22□□□□□ -2.05
DDX4-209ENST00000509312 LINC00158P58513 81 aa2.21□□□□□ -2.06
DDX4-209ENST00000509312 TNCP24821 2201 aa2.21□□□□□ -2.06
DDX4-209ENST00000509312 DMXL2Q8TDJ6 3036 aa2.2□□□□□ -2.06
DDX4-209ENST00000509312 POLQO75417 2590 aa2.2□□□□□ -2.06
DDX4-209ENST00000509312 Q8IZM0 81 aa2.2□□□□□ -2.06
DDX4-209ENST00000509312 SETD2Q9BYW2 2564 aaPredicted RBP2.2□□□□□ -2.06
DDX4-209ENST00000509312 CREBBPQ92793 2442 aa2.2□□□□□ -2.06
DDX4-209ENST00000509312 FREM2Q5SZK8 3169 aa2.19□□□□□ -2.06
DDX4-209ENST00000509312 PRB1P04280 392 aa2.19□□□□□ -2.06
DDX4-209ENST00000509312 SMIM2Q9BVW6 85 aa2.19□□□□□ -2.06
DDX4-209ENST00000509312 AKAP13Q12802 2813 aa2.19□□□□□ -2.06
DDX4-209ENST00000509312 LOC730098B7Z3J9 87 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 K7EQZ3 153 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 CRIP1P50238 77 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 DEFB119Q8N690 84 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 TP53AIP1Q9HCN2 124 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 CDKN2A-AS1Q9UH64 79 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 PLXNB2O15031 1838 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 CELSR3Q9NYQ7 3312 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 COL12A1Q99715 3063 aa2.18□□□□□ -2.06
DDX4-209ENST00000509312 NAV3Q8IVL0 2385 aa2.17□□□□□ -2.06
DDX4-209ENST00000509312 NF1P21359 2839 aa2.17□□□□□ -2.06
DDX4-209ENST00000509312 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
DDX4-209ENST00000509312 LINC00308Q8TCZ7 52 aa2.16□□□□□ -2.06
DDX4-209ENST00000509312 ZFHX3Q15911 3703 aa2.16□□□□□ -2.06
DDX4-209ENST00000509312 LYNX1G3V0Z9 82 aa2.15□□□□□ -2.07
DDX4-209ENST00000509312 TLN1Q9Y490 2541 aaKnown RBP2.15□□□□□ -2.07
DDX4-209ENST00000509312 ASXL3Q9C0F0 2248 aa2.14□□□□□ -2.07
DDX4-209ENST00000509312 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
DDX4-209ENST00000509312 F5P12259 2224 aa2.14□□□□□ -2.07
DDX4-209ENST00000509312 NBPF19A0A087WUL8 3843 aa2.14□□□□□ -2.07
DDX4-209ENST00000509312 SPG11Q96JI7 2443 aa2.13□□□□□ -2.07
DDX4-209ENST00000509312 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
DDX4-209ENST00000509312 CNFNQ9BYD5 112 aa2.13□□□□□ -2.07
DDX4-209ENST00000509312 PCNX1Q96RV3 2341 aa2.13□□□□□ -2.07
DDX4-209ENST00000509312 LRRK2Q5S007 2527 aa2.13□□□□□ -2.07
DDX4-209ENST00000509312 UTP20O75691 2785 aaKnown RBP2.12□□□□□ -2.07
DDX4-209ENST00000509312 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
DDX4-209ENST00000509312 LRBAP50851 2863 aa2.12□□□□□ -2.07
DDX4-209ENST00000509312 FLNCQ14315 2725 aa2.12□□□□□ -2.07
DDX4-209ENST00000509312 DOPEY2Q9Y3R5 2298 aa2.12□□□□□ -2.07
DDX4-209ENST00000509312 ITPR2Q14571 2701 aa2.11□□□□□ -2.07
DDX4-209ENST00000509312 ABCA2Q9BZC7 2435 aa2.11□□□□□ -2.07
DDX4-209ENST00000509312 NDUFA1O15239 70 aa2.11□□□□□ -2.07
DDX4-209ENST00000509312 MINOS1Q5TGZ0 78 aa2.11□□□□□ -2.07
DDX4-209ENST00000509312 DNHD1Q96M86 4753 aa2.11□□□□□ -2.07
DDX4-209ENST00000509312 CENPEQ02224 2701 aa2.1□□□□□ -2.07
DDX4-209ENST00000509312 CACNA1CQ13936 2221 aa2.1□□□□□ -2.07
DDX4-209ENST00000509312 ASCC3Q8N3C0 2202 aaKnown RBP2.1□□□□□ -2.07
DDX4-209ENST00000509312 USP9YO00507 2555 aaPredicted RBP2.09□□□□□ -2.07
DDX4-209ENST00000509312 ACACAQ13085 2346 aa2.09□□□□□ -2.07
DDX4-209ENST00000509312 CSMD1Q96PZ7 3565 aa2.09□□□□□ -2.08
DDX4-209ENST00000509312 ABCA1O95477 2261 aa2.08□□□□□ -2.08
DDX4-209ENST00000509312 APC2O95996 2303 aa2.08□□□□□ -2.08
DDX4-209ENST00000509312 MTORP42345 2549 aa2.08□□□□□ -2.08
DDX4-209ENST00000509312 LYNX1P0DP58 116 aa2.08□□□□□ -2.08
DDX4-209ENST00000509312 C6orf48Q9UBA6 75 aa2.08□□□□□ -2.08
DDX4-209ENST00000509312 F8P00451 2351 aa2.08□□□□□ -2.08
DDX4-209ENST00000509312 OTOGQ6ZRI0 2925 aa2.07□□□□□ -2.08
DDX4-209ENST00000509312 ATRQ13535 2644 aa2.07□□□□□ -2.08
DDX4-209ENST00000509312 COL6A6A6NMZ7 2263 aa2.07□□□□□ -2.08
DDX4-209ENST00000509312 KNTC1P50748 2209 aa2.07□□□□□ -2.08
DDX4-209ENST00000509312 URB1O60287 2271 aaKnown RBP2.07□□□□□ -2.08
DDX4-209ENST00000509312 PDZD2O15018 2839 aa2.07□□□□□ -2.08
DDX4-209ENST00000509312 SPENQ96T58 3664 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms