RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 AEBP2Q6ZN18 517 aaPredicted RBP31.42■■■□□ 2.62
DDX4-209ENST00000509312 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
DDX4-209ENST00000509312 PHF23Q9BUL5 403 aaPredicted RBP27.29■■□□□ 1.96
DDX4-209ENST00000509312 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
DDX4-209ENST00000509312 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
DDX4-209ENST00000509312 FOXD1Q16676 465 aa24.63■■□□□ 1.53
DDX4-209ENST00000509312 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
DDX4-209ENST00000509312 ADRA2BP18089 450 aa23.97■■□□□ 1.43
DDX4-209ENST00000509312 PIAS4Q8N2W9 510 aaPredicted RBP23.23■■□□□ 1.31
DDX4-209ENST00000509312 MSH5O43196 834 aa22.44■■□□□ 1.18
DDX4-209ENST00000509312 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
DDX4-209ENST00000509312 KCNA4P22459 653 aa22.14■■□□□ 1.13
DDX4-209ENST00000509312 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
DDX4-209ENST00000509312 MAPK8IP2Q13387 824 aaPredicted RBP21.7■■□□□ 1.06
DDX4-209ENST00000509312 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
DDX4-209ENST00000509312 CNKSR2Q8WXI2 1034 aa21.5■■□□□ 1.03
DDX4-209ENST00000509312 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
DDX4-209ENST00000509312 DMRT2Q9Y5R5 561 aa21.2■□□□□ 0.98
DDX4-209ENST00000509312 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
DDX4-209ENST00000509312 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
DDX4-209ENST00000509312 HOXD11P31277 338 aaPredicted RBP20.88■□□□□ 0.93
DDX4-209ENST00000509312 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
DDX4-209ENST00000509312 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
DDX4-209ENST00000509312 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
DDX4-209ENST00000509312 ZBTB22O15209 634 aa20.44■□□□□ 0.86
DDX4-209ENST00000509312 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
DDX4-209ENST00000509312 SLC4A2P04920 1241 aa20.24■□□□□ 0.83
DDX4-209ENST00000509312 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
DDX4-209ENST00000509312 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
DDX4-209ENST00000509312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.77
DDX4-209ENST00000509312 MYCNP04198 464 aaPredicted RBP19.73■□□□□ 0.75
DDX4-209ENST00000509312 U3KPZ7 1027 aaPredicted RBP19.66■□□□□ 0.74
DDX4-209ENST00000509312 ATXN8OSP0DMR3 200 aa19.4■□□□□ 0.7
DDX4-209ENST00000509312 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
DDX4-209ENST00000509312 RNF39Q9H2S5 420 aa19.35■□□□□ 0.69
DDX4-209ENST00000509312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
DDX4-209ENST00000509312 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
DDX4-209ENST00000509312 SAMD1Q6SPF0 538 aaPredicted RBP19.32■□□□□ 0.68
DDX4-209ENST00000509312 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
DDX4-209ENST00000509312 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
DDX4-209ENST00000509312 APLP2Q06481 763 aa19.01■□□□□ 0.63
DDX4-209ENST00000509312 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
DDX4-209ENST00000509312 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
DDX4-209ENST00000509312 CAPN15O75808 1086 aa18.88■□□□□ 0.61
DDX4-209ENST00000509312 POLA2Q14181 598 aa18.66■□□□□ 0.58
DDX4-209ENST00000509312 ABCB7O75027 752 aa18.61■□□□□ 0.57
DDX4-209ENST00000509312 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
DDX4-209ENST00000509312 DSG3P32926 999 aa18.53■□□□□ 0.56
DDX4-209ENST00000509312 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
DDX4-209ENST00000509312 FKBP8Q14318 412 aa18.48■□□□□ 0.55
DDX4-209ENST00000509312 FBLN2P98095 1184 aa18.32■□□□□ 0.52
DDX4-209ENST00000509312 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
DDX4-209ENST00000509312 SPDYE4A6NLX3 237 aa18.14■□□□□ 0.49
DDX4-209ENST00000509312 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
DDX4-209ENST00000509312 PROM2Q8N271 834 aa17.9■□□□□ 0.46
DDX4-209ENST00000509312 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
DDX4-209ENST00000509312 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
DDX4-209ENST00000509312 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
DDX4-209ENST00000509312 SPDYE2Q495Y8 402 aa17.81■□□□□ 0.44
DDX4-209ENST00000509312 SSUH2Q9Y2M2 353 aa17.77■□□□□ 0.44
DDX4-209ENST00000509312 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDX4-209ENST00000509312 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
DDX4-209ENST00000509312 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
DDX4-209ENST00000509312 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
DDX4-209ENST00000509312 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
DDX4-209ENST00000509312 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
DDX4-209ENST00000509312 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
DDX4-209ENST00000509312 REM2Q8IYK8 340 aaPredicted RBP17.32■□□□□ 0.36
DDX4-209ENST00000509312 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
DDX4-209ENST00000509312 AMER1Q5JTC6 1135 aaPredicted RBP17.27■□□□□ 0.36
DDX4-209ENST00000509312 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
DDX4-209ENST00000509312 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
DDX4-209ENST00000509312 MIER1Q8N108 512 aa17.17■□□□□ 0.34
DDX4-209ENST00000509312 PLCD3Q8N3E9 789 aa17.14■□□□□ 0.33
DDX4-209ENST00000509312 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
DDX4-209ENST00000509312 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
DDX4-209ENST00000509312 PRR29P0C7W0 189 aa17.04■□□□□ 0.32
DDX4-209ENST00000509312 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
DDX4-209ENST00000509312 SPOCK2Q92563 424 aa16.96■□□□□ 0.31
DDX4-209ENST00000509312 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
DDX4-209ENST00000509312 MNX1P50219 401 aaPredicted RBP16.86■□□□□ 0.29
DDX4-209ENST00000509312 PKD2Q13563 968 aa16.85■□□□□ 0.29
DDX4-209ENST00000509312 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
DDX4-209ENST00000509312 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
DDX4-209ENST00000509312 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
DDX4-209ENST00000509312 NUBP1P53384 320 aa16.74■□□□□ 0.27
DDX4-209ENST00000509312 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDX4-209ENST00000509312 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
DDX4-209ENST00000509312 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
DDX4-209ENST00000509312 PIP4P2Q8N4L2 257 aa16.65■□□□□ 0.26
DDX4-209ENST00000509312 ECM2O94769 699 aaPredicted RBP16.62■□□□□ 0.25
DDX4-209ENST00000509312 RASEFQ8IZ41 740 aa16.62■□□□□ 0.25
DDX4-209ENST00000509312 FARP1Q9Y4F1 1045 aaPredicted RBP16.62■□□□□ 0.25
DDX4-209ENST00000509312 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDX4-209ENST00000509312 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
DDX4-209ENST00000509312 RGL2O15211 777 aa16.52■□□□□ 0.24
DDX4-209ENST00000509312 GSE1Q14687 1217 aa16.52■□□□□ 0.24
DDX4-209ENST00000509312 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
DDX4-209ENST00000509312 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
DDX4-209ENST00000509312 TSPYL2Q9H2G4 693 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms