RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 PTPN13Q12923 2485 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 ITPR3Q14573 2671 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 ZNF462Q96JM2 2506 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 A0A087WSZ3 146 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 H0Y9P7 68 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 PRR26Q8N8Z3 221 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 ST20-AS1Q8NBB2 130 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 RETNQ9HD89 108 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 PIEZO1Q92508 2521 aa3.7□□□□□ -1.82
CLDND1-213ENST00000506927 FLNCQ14315 2725 aa3.69□□□□□ -1.82
CLDND1-213ENST00000506927 MOBPQ13875 183 aa3.69□□□□□ -1.82
CLDND1-213ENST00000506927 UBE2DNLQ8IWF7 75 aa3.69□□□□□ -1.82
CLDND1-213ENST00000506927 LINC00208Q96KT6 92 aa3.69□□□□□ -1.82
CLDND1-213ENST00000506927 CFAP46Q8IYW2 2715 aa3.69□□□□□ -1.82
CLDND1-213ENST00000506927 LRRK2Q5S007 2527 aa3.69□□□□□ -1.82
CLDND1-213ENST00000506927 FAM168BA1KXE4 195 aa3.68□□□□□ -1.82
CLDND1-213ENST00000506927 APCP25054 2843 aa3.68□□□□□ -1.82
CLDND1-213ENST00000506927 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
CLDND1-213ENST00000506927 KMT2BQ9UMN6 2715 aaPredicted RBP3.68□□□□□ -1.82
CLDND1-213ENST00000506927 SETXQ7Z333 2677 aaKnown RBP3.67□□□□□ -1.82
CLDND1-213ENST00000506927 WFDC13Q8IUB5 93 aa3.67□□□□□ -1.82
CLDND1-213ENST00000506927 POLQO75417 2590 aa3.66□□□□□ -1.82
CLDND1-213ENST00000506927 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
CLDND1-213ENST00000506927 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
CLDND1-213ENST00000506927 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
CLDND1-213ENST00000506927 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
CLDND1-213ENST00000506927 EPG5Q9HCE0 2579 aa3.66□□□□□ -1.82
CLDND1-213ENST00000506927 FLNAP21333 2647 aaKnown RBP3.66□□□□□ -1.82
CLDND1-213ENST00000506927 A0A096LNI7 61 aa3.65□□□□□ -1.83
CLDND1-213ENST00000506927 IGKV2-24A0A0C4DH68 120 aa3.65□□□□□ -1.83
CLDND1-213ENST00000506927 C9orf163Q8N9P6 203 aa3.65□□□□□ -1.83
CLDND1-213ENST00000506927 SONP18583 2426 aaKnown RBP3.65□□□□□ -1.83
CLDND1-213ENST00000506927 JMJD1CQ15652 2540 aa3.64□□□□□ -1.83
CLDND1-213ENST00000506927 PRLHP81277 87 aa3.64□□□□□ -1.83
CLDND1-213ENST00000506927 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
CLDND1-213ENST00000506927 ABCA12Q86UK0 2595 aa3.64□□□□□ -1.83
CLDND1-213ENST00000506927 AKAP9Q99996 3911 aa3.64□□□□□ -1.83
CLDND1-213ENST00000506927 NUPR2A6NF83 97 aa3.63□□□□□ -1.83
CLDND1-213ENST00000506927 ATP11AUNQ6ZP68 121 aa3.63□□□□□ -1.83
CLDND1-213ENST00000506927 FN1P02751 2386 aaKnown RBP3.63□□□□□ -1.83
CLDND1-213ENST00000506927 LOC101927531A0A1B0GV80 90 aa3.62□□□□□ -1.83
CLDND1-213ENST00000506927 A0A1W2PNN7 141 aa3.62□□□□□ -1.83
CLDND1-213ENST00000506927 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
CLDND1-213ENST00000506927 NDUFS5O43920 106 aa3.62□□□□□ -1.83
CLDND1-213ENST00000506927 Q75L30 129 aa3.62□□□□□ -1.83
CLDND1-213ENST00000506927 PDZD2O15018 2839 aa3.62□□□□□ -1.83
CLDND1-213ENST00000506927 USP24Q9UPU5 2620 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 PSPHP1O15172 72 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 KRTAP24-1Q3LI83 254 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 LINC00483Q53H64 154 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 CASC10Q5T4H9 136 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 Q6ZR54 194 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
CLDND1-213ENST00000506927 ANK3Q12955 4377 aaKnown RBP3.6□□□□□ -1.83
CLDND1-213ENST00000506927 C8orf87E5RJ46 101 aa3.6□□□□□ -1.83
CLDND1-213ENST00000506927 SEC61GP60059 68 aa3.6□□□□□ -1.83
CLDND1-213ENST00000506927 CD164Q04900 197 aa3.6□□□□□ -1.83
CLDND1-213ENST00000506927 DEFB116Q30KQ4 102 aa3.6□□□□□ -1.83
CLDND1-213ENST00000506927 PHF5AQ7RTV0 110 aaKnown RBP3.6□□□□□ -1.83
CLDND1-213ENST00000506927 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
CLDND1-213ENST00000506927 CCDC168Q8NDH2 2452 aa3.6□□□□□ -1.83
CLDND1-213ENST00000506927 CENPEQ02224 2701 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 NBDYA0A0U1RRE5 68 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 MMP24-AS1A0A0U1RRL7 71 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 A0A1B0GVX0 72 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 LRCOL1A6NCL2 159 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 A6NED7 52 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 A8MUN3 132 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 ASB16-AS1Q495Z4 193 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 COA5Q86WW8 74 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 MRPL34Q9BQ48 92 aaKnown RBP3.59□□□□□ -1.83
CLDND1-213ENST00000506927 C8orf17Q9NRJ1 99 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 APLNQ9ULZ1 77 aa3.59□□□□□ -1.83
CLDND1-213ENST00000506927 NF1P21359 2839 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 NBPF19A0A087WUL8 3843 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 K7EIL1 84 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 ACYP2P14621 99 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 PRR4Q16378 134 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
CLDND1-213ENST00000506927 GCN1Q92616 2671 aaKnown RBP3.58□□□□□ -1.84
CLDND1-213ENST00000506927 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
CLDND1-213ENST00000506927 NOTCH2Q04721 2471 aa3.57□□□□□ -1.84
CLDND1-213ENST00000506927 Q5VV11 94 aa3.57□□□□□ -1.84
CLDND1-213ENST00000506927 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
CLDND1-213ENST00000506927 ZFYVE26Q68DK2 2539 aa3.56□□□□□ -1.84
CLDND1-213ENST00000506927 ZNF861PO60384 105 aa3.56□□□□□ -1.84
CLDND1-213ENST00000506927 SSBP3-AS1Q7Z2R9 100 aa3.56□□□□□ -1.84
CLDND1-213ENST00000506927 SPACA4Q8TDM5 124 aa3.56□□□□□ -1.84
CLDND1-213ENST00000506927 NBEAL2Q6ZNJ1 2754 aa3.55□□□□□ -1.84
CLDND1-213ENST00000506927 ZNF469Q96JG9 3925 aaPredicted RBP3.55□□□□□ -1.84
CLDND1-213ENST00000506927 IGLV9-49A0A0B4J1Y8 123 aa3.55□□□□□ -1.84
CLDND1-213ENST00000506927 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CLDND1-213ENST00000506927 A0A087X002 238 aa3.54□□□□□ -1.84
CLDND1-213ENST00000506927 IGHV6-1A0A0B4J1U7 121 aa3.54□□□□□ -1.84
CLDND1-213ENST00000506927 ACANP16112 2415 aa3.54□□□□□ -1.84
CLDND1-213ENST00000506927 SETD2Q9BYW2 2564 aaPredicted RBP3.54□□□□□ -1.84
CLDND1-213ENST00000506927 MTORP42345 2549 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms