RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 CHD8Q9HCK8 2581 aa6.69□□□□□ -1.34
KLHL3-207ENST00000506491 LCE6AA0A183 80 aa6.68□□□□□ -1.34
KLHL3-207ENST00000506491 POLQO75417 2590 aa6.68□□□□□ -1.34
KLHL3-207ENST00000506491 SPRR1BP22528 89 aa6.67□□□□□ -1.34
KLHL3-207ENST00000506491 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
KLHL3-207ENST00000506491 KRTAP26-1Q6PEX3 210 aa6.66□□□□□ -1.34
KLHL3-207ENST00000506491 SPTBN4Q9H254 2564 aa6.65□□□□□ -1.34
KLHL3-207ENST00000506491 KRTAP1-5Q9BYS1 174 aa6.64□□□□□ -1.35
KLHL3-207ENST00000506491 SPATA8Q6RVD6 105 aa6.63□□□□□ -1.35
KLHL3-207ENST00000506491 FASNP49327 2511 aaKnown RBP6.63□□□□□ -1.35
KLHL3-207ENST00000506491 Q6ZR54 194 aa6.6□□□□□ -1.35
KLHL3-207ENST00000506491 CEP295Q9C0D2 2601 aa6.6□□□□□ -1.35
KLHL3-207ENST00000506491 CEP350Q5VT06 3117 aa6.55□□□□□ -1.36
KLHL3-207ENST00000506491 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
KLHL3-207ENST00000506491 PANO1I0J062 215 aa6.52□□□□□ -1.37
KLHL3-207ENST00000506491 A0A0C4DFX4 3053 aa6.5□□□□□ -1.37
KLHL3-207ENST00000506491 MKI67P46013 3256 aaKnown RBP6.5□□□□□ -1.37
KLHL3-207ENST00000506491 A0A087X002 238 aa6.49□□□□□ -1.37
KLHL3-207ENST00000506491 DNAH14Q0VDD8 3507 aa6.48□□□□□ -1.37
KLHL3-207ENST00000506491 USP24Q9UPU5 2620 aa6.47□□□□□ -1.37
KLHL3-207ENST00000506491 A8MUU9 505 aa6.46□□□□□ -1.38
KLHL3-207ENST00000506491 MGAM2Q2M2H8 2515 aa6.43□□□□□ -1.38
KLHL3-207ENST00000506491 A8MU10 97 aa6.39□□□□□ -1.39
KLHL3-207ENST00000506491 KRTAP16-1A8MUX0 517 aa6.39□□□□□ -1.39
KLHL3-207ENST00000506491 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
KLHL3-207ENST00000506491 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
KLHL3-207ENST00000506491 BRCA2P51587 3418 aa6.38□□□□□ -1.39
KLHL3-207ENST00000506491 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
KLHL3-207ENST00000506491 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
KLHL3-207ENST00000506491 A6NN06 94 aa6.36□□□□□ -1.39
KLHL3-207ENST00000506491 HECTD1Q9ULT8 2610 aa6.36□□□□□ -1.39
KLHL3-207ENST00000506491 XIRP2A4UGR9 3374 aa6.35□□□□□ -1.39
KLHL3-207ENST00000506491 FLG2Q5D862 2391 aaPredicted RBP6.35□□□□□ -1.39
KLHL3-207ENST00000506491 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
KLHL3-207ENST00000506491 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
KLHL3-207ENST00000506491 CFAP54Q96N23 3096 aa6.32□□□□□ -1.4
KLHL3-207ENST00000506491 TNP1P09430 55 aa6.3□□□□□ -1.4
KLHL3-207ENST00000506491 CHD7Q9P2D1 2997 aa6.29□□□□□ -1.4
KLHL3-207ENST00000506491 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
KLHL3-207ENST00000506491 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
KLHL3-207ENST00000506491 CELSR3Q9NYQ7 3312 aa6.28□□□□□ -1.4
KLHL3-207ENST00000506491 SZT2Q5T011 3432 aa6.27□□□□□ -1.41
KLHL3-207ENST00000506491 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
KLHL3-207ENST00000506491 TRIOO75962 3097 aa6.25□□□□□ -1.41
KLHL3-207ENST00000506491 EPG5Q9HCE0 2579 aa6.24□□□□□ -1.41
KLHL3-207ENST00000506491 ITPR3Q14573 2671 aa6.23□□□□□ -1.41
KLHL3-207ENST00000506491 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
KLHL3-207ENST00000506491 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
KLHL3-207ENST00000506491 CDH23Q9H251 3354 aa6.22□□□□□ -1.41
KLHL3-207ENST00000506491 LAMA2P24043 3122 aaKnown RBP6.22□□□□□ -1.41
KLHL3-207ENST00000506491 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
KLHL3-207ENST00000506491 RANBP2P49792 3224 aaKnown RBP6.21□□□□□ -1.42
KLHL3-207ENST00000506491 FLNBO75369 2602 aaKnown RBP6.2□□□□□ -1.42
KLHL3-207ENST00000506491 HTTP42858 3142 aa6.18□□□□□ -1.42
KLHL3-207ENST00000506491 PRRC2CQ9Y520 2896 aaKnown RBP6.18□□□□□ -1.42
KLHL3-207ENST00000506491 LAMA3Q16787 3333 aa6.17□□□□□ -1.42
KLHL3-207ENST00000506491 ATRQ13535 2644 aa6.17□□□□□ -1.42
KLHL3-207ENST00000506491 KRTAP10-8P60410 259 aa6.16□□□□□ -1.42
KLHL3-207ENST00000506491 UNC80Q8N2C7 3258 aa6.15□□□□□ -1.42
KLHL3-207ENST00000506491 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
KLHL3-207ENST00000506491 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
KLHL3-207ENST00000506491 KRTAP7-1Q8IUC3 87 aa6.13□□□□□ -1.43
KLHL3-207ENST00000506491 MAST4O15021 2626 aa6.12□□□□□ -1.43
KLHL3-207ENST00000506491 HELZ2Q9BYK8 2649 aaKnown RBP6.11□□□□□ -1.43
KLHL3-207ENST00000506491 FREM2Q5SZK8 3169 aa6.1□□□□□ -1.43
KLHL3-207ENST00000506491 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
KLHL3-207ENST00000506491 REV3LO60673 3130 aa6.08□□□□□ -1.44
KLHL3-207ENST00000506491 CFAP46Q8IYW2 2715 aa6.08□□□□□ -1.44
KLHL3-207ENST00000506491 COL6A3P12111 3177 aa6.08□□□□□ -1.44
KLHL3-207ENST00000506491 STAB1Q9NY15 2570 aa6.06□□□□□ -1.44
KLHL3-207ENST00000506491 VPS13AQ96RL7 3174 aa6.05□□□□□ -1.44
KLHL3-207ENST00000506491 VCANP13611 3396 aa6.05□□□□□ -1.44
KLHL3-207ENST00000506491 NBEAL1Q6ZS30 2694 aa6.03□□□□□ -1.44
KLHL3-207ENST00000506491 CHD9Q3L8U1 2897 aa6.03□□□□□ -1.44
KLHL3-207ENST00000506491 USP34Q70CQ2 3546 aa6.03□□□□□ -1.44
KLHL3-207ENST00000506491 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
KLHL3-207ENST00000506491 SPTBN5Q9NRC6 3674 aaKnown RBP6.01□□□□□ -1.45
KLHL3-207ENST00000506491 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
KLHL3-207ENST00000506491 XP32Q5T750 250 aa5.97□□□□□ -1.45
KLHL3-207ENST00000506491 PRUNE2Q8WUY3 3088 aa5.96□□□□□ -1.46
KLHL3-207ENST00000506491 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
KLHL3-207ENST00000506491 LAMA1P25391 3075 aa5.94□□□□□ -1.46
KLHL3-207ENST00000506491 TEX15Q9BXT5 2789 aa5.93□□□□□ -1.46
KLHL3-207ENST00000506491 KRTAP21-3Q3LHN1 58 aa5.92□□□□□ -1.46
KLHL3-207ENST00000506491 MYO15AQ9UKN7 3530 aa5.92□□□□□ -1.46
KLHL3-207ENST00000506491 CHD6Q8TD26 2715 aa5.91□□□□□ -1.46
KLHL3-207ENST00000506491 FRYQ5TBA9 3013 aa5.91□□□□□ -1.46
KLHL3-207ENST00000506491 AKAP13Q12802 2813 aa5.91□□□□□ -1.46
KLHL3-207ENST00000506491 SPEGQ15772 3267 aa5.91□□□□□ -1.46
KLHL3-207ENST00000506491 MGAQ8IWI9 3026 aa5.9□□□□□ -1.46
KLHL3-207ENST00000506491 WDFY4Q6ZS81 3184 aa5.89□□□□□ -1.47
KLHL3-207ENST00000506491 DCHS1Q96JQ0 3298 aa5.88□□□□□ -1.47
KLHL3-207ENST00000506491 CENPEQ02224 2701 aa5.88□□□□□ -1.47
KLHL3-207ENST00000506491 TRANK1O15050 2925 aa5.87□□□□□ -1.47
KLHL3-207ENST00000506491 KALRNO60229 2985 aa5.85□□□□□ -1.47
KLHL3-207ENST00000506491 P0C880 135 aa5.85□□□□□ -1.47
KLHL3-207ENST00000506491 STAB2Q8WWQ8 2551 aa5.85□□□□□ -1.47
KLHL3-207ENST00000506491 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
KLHL3-207ENST00000506491 H0YAA0 97 aa5.83□□□□□ -1.48
KLHL3-207ENST00000506491 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms