RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	MAGI2	Q86UL8	1455 aa		-0.94	□□□□□ -2.56
TRA2A-210	ENST00000497730	AKAP9	Q99996	3911 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	REV3L	O60673	3130 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	PEG3	Q9GZU2	1588 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	CHD7	Q9P2D1	2997 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	MYO9A	B2RTY4	2548 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730		H0YAA0	97 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	IFI6	P09912	130 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	PEA15	Q15121	130 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	SMG1	Q96Q15	3661 aa	Known RBP	-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	PKD1L2	Q7Z442	2459 aa		-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	EPRS	P07814	1512 aa	Known RBP	-0.95	□□□□□ -2.56
TRA2A-210	ENST00000497730	RGPD2	P0DJD1	1756 aa		-0.96	□□□□□ -2.56
TRA2A-210	ENST00000497730	TRANK1	O15050	2925 aa		-0.97	□□□□□ -2.56
TRA2A-210	ENST00000497730	DMXL1	Q9Y485	3027 aa		-0.97	□□□□□ -2.56
TRA2A-210	ENST00000497730	TRAV21	A0A0B4J279	112 aa		-0.97	□□□□□ -2.56
TRA2A-210	ENST00000497730	ACYP1	P07311	99 aa		-0.97	□□□□□ -2.56
TRA2A-210	ENST00000497730	DEFB106A	Q8N104	65 aa		-0.97	□□□□□ -2.56
TRA2A-210	ENST00000497730	DNAH9	Q9NYC9	4486 aa		-0.97	□□□□□ -2.56
TRA2A-210	ENST00000497730	EYS	Q5T1H1	3165 aa		-0.97	□□□□□ -2.57
TRA2A-210	ENST00000497730	FANCA	O15360	1455 aa		-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	LRRC7	Q96NW7	1537 aa		-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	TRRAP	Q9Y4A5	3859 aa		-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	PKD1L3	Q7Z443	1732 aa		-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	RELN	P78509	3460 aa		-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	RGPD8	O14715	1765 aa	Predicted RBP	-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	RGPD5	Q99666	1765 aa		-0.98	□□□□□ -2.57
TRA2A-210	ENST00000497730	SPEN	Q96T58	3664 aa	Known RBP	-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	ATP10B	O94823	1461 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	PREX1	Q8TCU6	1659 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	DNAH5	Q8TE73	4624 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	HMGN2	P05204	90 aa	Known RBP	-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	C4A	P0C0L4	1744 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	C4B	P0C0L5	1744 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	ATM	Q13315	3056 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	MAP3K1	Q13233	1512 aa		-0.99	□□□□□ -2.57
TRA2A-210	ENST00000497730	DNAH17	Q9UFH2	4485 aa		-1	□□□□□ -2.57
TRA2A-210	ENST00000497730	NDUFB1	O75438	58 aa		-1	□□□□□ -2.57
TRA2A-210	ENST00000497730	IAPP	P10997	89 aa		-1	□□□□□ -2.57
TRA2A-210	ENST00000497730	IFI27	P40305	119 aa	Predicted RBP	-1	□□□□□ -2.57
TRA2A-210	ENST00000497730	GYPA	P02724	150 aa		-1.01	□□□□□ -2.57
TRA2A-210	ENST00000497730	DEFB130B	P0DP73	79 aa		-1.01	□□□□□ -2.57
TRA2A-210	ENST00000497730	DEFB130A	P0DP74	79 aa		-1.01	□□□□□ -2.57
TRA2A-210	ENST00000497730	PLIN4	Q96Q06	1357 aa		-1.01	□□□□□ -2.57
TRA2A-210	ENST00000497730	DYNC2H1	Q8NCM8	4307 aa	Known RBP	-1.01	□□□□□ -2.57
TRA2A-210	ENST00000497730	QSER1	Q2KHR3	1735 aa		-1.01	□□□□□ -2.57
TRA2A-210	ENST00000497730	ADGRG4	Q8IZF6	3080 aa		-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	CSMD1	Q96PZ7	3565 aa		-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	KRTAP19-6	Q3LI70	58 aa		-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	CLPSL2	Q6UWE3	100 aa		-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	TLN1	Q9Y490	2541 aa	Known RBP	-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	MYH4	Q9Y623	1939 aa		-1.02	□□□□□ -2.57
TRA2A-210	ENST00000497730	FAM186A	A6NE01	2351 aa		-1.03	□□□□□ -2.57
TRA2A-210	ENST00000497730	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-1.03	□□□□□ -2.57
TRA2A-210	ENST00000497730	ABCC10	Q5T3U5	1492 aa		-1.03	□□□□□ -2.57
TRA2A-210	ENST00000497730	CENPE	Q02224	2701 aa		-1.03	□□□□□ -2.57
TRA2A-210	ENST00000497730	ACACB	O00763	2458 aa		-1.03	□□□□□ -2.57
TRA2A-210	ENST00000497730	PRUNE2	Q8WUY3	3088 aa		-1.03	□□□□□ -2.57
TRA2A-210	ENST00000497730	CCNB3	Q8WWL7	1395 aa		-1.04	□□□□□ -2.58
TRA2A-210	ENST00000497730	C20orf78	Q9BR46	151 aa		-1.04	□□□□□ -2.58
TRA2A-210	ENST00000497730	SNHG12	Q9BXW3	62 aa		-1.04	□□□□□ -2.58
TRA2A-210	ENST00000497730	TRIO	O75962	3097 aa		-1.04	□□□□□ -2.58
TRA2A-210	ENST00000497730	MAGI3	Q5TCQ9	1506 aa		-1.05	□□□□□ -2.58
TRA2A-210	ENST00000497730	SCN11A	Q9UI33	1791 aa		-1.05	□□□□□ -2.58
TRA2A-210	ENST00000497730	MYMX	A0A1B0GTQ4	84 aa		-1.05	□□□□□ -2.58
TRA2A-210	ENST00000497730	CEBPZOS	A8MTT3	80 aa		-1.05	□□□□□ -2.58
TRA2A-210	ENST00000497730	LRBA	P50851	2863 aa		-1.05	□□□□□ -2.58
TRA2A-210	ENST00000497730	TLN2	Q9Y4G6	2542 aa		-1.06	□□□□□ -2.58
TRA2A-210	ENST00000497730	UMAD1	C9J7I0	102 aa		-1.06	□□□□□ -2.58
TRA2A-210	ENST00000497730	S100A8	P05109	93 aa		-1.06	□□□□□ -2.58
TRA2A-210	ENST00000497730	PKIA	P61925	76 aa		-1.06	□□□□□ -2.58
TRA2A-210	ENST00000497730	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	-1.06	□□□□□ -2.58
TRA2A-210	ENST00000497730	ATP7B	P35670	1465 aa		-1.06	□□□□□ -2.58
TRA2A-210	ENST00000497730	FRY	Q5TBA9	3013 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	CRYBG3	Q68DQ2	2970 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	CSMD2	Q7Z408	3487 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	C5orf42	Q9H799	3197 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	MMP24-AS1	A0A0U1RRL7	71 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	VPS8	Q8N3P4	1428 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	USP32	Q8NFA0	1604 aa		-1.07	□□□□□ -2.58
TRA2A-210	ENST00000497730	DNAH11	Q96DT5	4516 aa		-1.08	□□□□□ -2.58
TRA2A-210	ENST00000497730	NEXMIF	Q5QGS0	1516 aa		-1.08	□□□□□ -2.58
TRA2A-210	ENST00000497730	LYNX1	G3V0Z9	82 aa		-1.08	□□□□□ -2.58
TRA2A-210	ENST00000497730	TNP1	P09430	55 aa		-1.08	□□□□□ -2.58
TRA2A-210	ENST00000497730	PLXNC1	O60486	1568 aa		-1.08	□□□□□ -2.58
TRA2A-210	ENST00000497730	NDUFA4	O00483	81 aa		-1.09	□□□□□ -2.58
TRA2A-210	ENST00000497730	MT1X	P80297	61 aa		-1.09	□□□□□ -2.58
TRA2A-210	ENST00000497730	KRTAP19-5	Q3LI72	72 aa		-1.09	□□□□□ -2.58
TRA2A-210	ENST00000497730	ANKRD26	Q9UPS8	1709 aa		-1.09	□□□□□ -2.58
TRA2A-210	ENST00000497730	DEPDC5	O75140	1603 aa		-1.1	□□□□□ -2.59
TRA2A-210	ENST00000497730	MYO3A	Q8NEV4	1616 aa		-1.1	□□□□□ -2.59
TRA2A-210	ENST00000497730	MRPL33	O75394	65 aa	Known RBP	-1.1	□□□□□ -2.59
TRA2A-210	ENST00000497730	SNRPF	P62306	86 aa	Known RBP	-1.1	□□□□□ -2.59
TRA2A-210	ENST00000497730	NWD1	Q149M9	1564 aa		-1.1	□□□□□ -2.59
TRA2A-210	ENST00000497730	RGPD1	P0DJD0	1748 aa		-1.1	□□□□□ -2.59
TRA2A-210	ENST00000497730		A0A087WXM4	84 aa		-1.11	□□□□□ -2.59
TRA2A-210	ENST00000497730		Q9H521	79 aa		-1.11	□□□□□ -2.59
TRA2A-210	ENST00000497730	NCOA2	Q15596	1464 aa		-1.12	□□□□□ -2.59
TRA2A-210	ENST00000497730	WT1-AS	Q06250	92 aa		-1.12	□□□□□ -2.59

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms