RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PRR4Q16378 134 aa6.99□□□□□ -1.29
CSNK1E-213ENST00000495232 Q8N377 158 aa6.99□□□□□ -1.29
CSNK1E-213ENST00000495232 A0A1B0GX51 115 aa6.97□□□□□ -1.29
CSNK1E-213ENST00000495232 GHRHP01286 108 aa6.97□□□□□ -1.29
CSNK1E-213ENST00000495232 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
CSNK1E-213ENST00000495232 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
CSNK1E-213ENST00000495232 PPDPFLQ8WWR9 84 aa6.97□□□□□ -1.29
CSNK1E-213ENST00000495232 SCGB1C2P0DMR2 95 aa6.96□□□□□ -1.3
CSNK1E-213ENST00000495232 SNHG12Q9BXW3 62 aa6.96□□□□□ -1.3
CSNK1E-213ENST00000495232 DNAL4O96015 105 aa6.95□□□□□ -1.3
CSNK1E-213ENST00000495232 FAM218AQ96MZ4 157 aa6.95□□□□□ -1.3
CSNK1E-213ENST00000495232 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
CSNK1E-213ENST00000495232 HRCT1Q6UXD1 115 aa6.94□□□□□ -1.3
CSNK1E-213ENST00000495232 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
CSNK1E-213ENST00000495232 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
CSNK1E-213ENST00000495232 BATFQ16520 125 aa6.92□□□□□ -1.3
CSNK1E-213ENST00000495232 CD164Q04900 197 aa6.91□□□□□ -1.3
CSNK1E-213ENST00000495232 LIMD2Q9BT23 127 aa6.91□□□□□ -1.3
CSNK1E-213ENST00000495232 H3BQ85 93 aa6.9□□□□□ -1.3
CSNK1E-213ENST00000495232 FABP2P12104 132 aa6.9□□□□□ -1.3
CSNK1E-213ENST00000495232 Q6JHZ5 121 aa6.9□□□□□ -1.3
CSNK1E-213ENST00000495232 ORMDL1Q9P0S3 153 aa6.89□□□□□ -1.31
CSNK1E-213ENST00000495232 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
CSNK1E-213ENST00000495232 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
CSNK1E-213ENST00000495232 LRP2P98164 4655 aa6.87□□□□□ -1.31
CSNK1E-213ENST00000495232 IGLV8-61A0A075B6I0 122 aa6.87□□□□□ -1.31
CSNK1E-213ENST00000495232 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
CSNK1E-213ENST00000495232 LPAP08519 4548 aa6.87□□□□□ -1.31
CSNK1E-213ENST00000495232 A0A0G2JQZ4 141 aa6.86□□□□□ -1.31
CSNK1E-213ENST00000495232 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
CSNK1E-213ENST00000495232 LST1O00453 97 aa6.86□□□□□ -1.31
CSNK1E-213ENST00000495232 TRACP01848 142 aa6.86□□□□□ -1.31
CSNK1E-213ENST00000495232 LYRM7Q5U5X0 104 aa6.86□□□□□ -1.31
CSNK1E-213ENST00000495232 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
CSNK1E-213ENST00000495232 H3BMG7 143 aa6.85□□□□□ -1.31
CSNK1E-213ENST00000495232 H3BUT2 72 aa6.85□□□□□ -1.31
CSNK1E-213ENST00000495232 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
CSNK1E-213ENST00000495232 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
CSNK1E-213ENST00000495232 ATXN8Q156A1 80 aa6.84□□□□□ -1.31
CSNK1E-213ENST00000495232 TCL1BO95988 128 aa6.83□□□□□ -1.32
CSNK1E-213ENST00000495232 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
CSNK1E-213ENST00000495232 Q5XG85 94 aa6.81□□□□□ -1.32
CSNK1E-213ENST00000495232 CDIP1Q9H305 208 aa6.81□□□□□ -1.32
CSNK1E-213ENST00000495232 TRBV7-7A0A0K0K1E9 115 aa6.8□□□□□ -1.32
CSNK1E-213ENST00000495232 UBE2V1Q13404 147 aa6.8□□□□□ -1.32
CSNK1E-213ENST00000495232 TRBV20-1A0A075B6N2 111 aa6.79□□□□□ -1.32
CSNK1E-213ENST00000495232 A0A1B0GV72 72 aa6.79□□□□□ -1.32
CSNK1E-213ENST00000495232 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
CSNK1E-213ENST00000495232 BAALC-AS2P0C853 105 aa6.79□□□□□ -1.32
CSNK1E-213ENST00000495232 TEN1Q86WV5 123 aa6.79□□□□□ -1.32
CSNK1E-213ENST00000495232 ANKRD29Q8N6D5 301 aa6.79□□□□□ -1.32
CSNK1E-213ENST00000495232 TAX1BP3O14907 124 aa6.77□□□□□ -1.33
CSNK1E-213ENST00000495232 Q6Q795 121 aa6.76□□□□□ -1.33
CSNK1E-213ENST00000495232 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
CSNK1E-213ENST00000495232 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
CSNK1E-213ENST00000495232 PCP4L1A6NKN8 68 aa6.75□□□□□ -1.33
CSNK1E-213ENST00000495232 RBM3P98179 157 aaKnown RBP6.75□□□□□ -1.33
CSNK1E-213ENST00000495232 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
CSNK1E-213ENST00000495232 C1orf195Q5TG92 126 aa6.75□□□□□ -1.33
CSNK1E-213ENST00000495232 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
CSNK1E-213ENST00000495232 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
CSNK1E-213ENST00000495232 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
CSNK1E-213ENST00000495232 C9JAW5 83 aa6.73□□□□□ -1.33
CSNK1E-213ENST00000495232 A0A087WSZ3 146 aa6.72□□□□□ -1.33
CSNK1E-213ENST00000495232 TRBV7-4A0A0J9YYF1 115 aa6.72□□□□□ -1.33
CSNK1E-213ENST00000495232 CCKP06307 115 aa6.72□□□□□ -1.33
CSNK1E-213ENST00000495232 A0A1W2PNM2 257 aa6.71□□□□□ -1.34
CSNK1E-213ENST00000495232 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
CSNK1E-213ENST00000495232 VPS25Q9BRG1 176 aa6.71□□□□□ -1.34
CSNK1E-213ENST00000495232 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
CSNK1E-213ENST00000495232 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
CSNK1E-213ENST00000495232 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
CSNK1E-213ENST00000495232 H3BT86 120 aa6.66□□□□□ -1.34
CSNK1E-213ENST00000495232 PDE6GP18545 87 aa6.65□□□□□ -1.34
CSNK1E-213ENST00000495232 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.34
CSNK1E-213ENST00000495232 XP32Q5T750 250 aa6.64□□□□□ -1.35
CSNK1E-213ENST00000495232 MTURNQ8N3F0 131 aa6.64□□□□□ -1.35
CSNK1E-213ENST00000495232 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
CSNK1E-213ENST00000495232 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
CSNK1E-213ENST00000495232 C14orf132Q9NPU4 83 aa6.63□□□□□ -1.35
CSNK1E-213ENST00000495232 Q6ZQT0 140 aa6.62□□□□□ -1.35
CSNK1E-213ENST00000495232 SIGMAR1Q99720 223 aa6.62□□□□□ -1.35
CSNK1E-213ENST00000495232 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
CSNK1E-213ENST00000495232 A0A1B0GW54 56 aa6.6□□□□□ -1.35
CSNK1E-213ENST00000495232 K7EP34 96 aa6.6□□□□□ -1.35
CSNK1E-213ENST00000495232 IGKV4-1P06312 121 aa6.6□□□□□ -1.35
CSNK1E-213ENST00000495232 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
CSNK1E-213ENST00000495232 OBSCN-AS1Q96MR7 158 aa6.6□□□□□ -1.35
CSNK1E-213ENST00000495232 Q96NJ1 140 aa6.6□□□□□ -1.35
CSNK1E-213ENST00000495232 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
CSNK1E-213ENST00000495232 MUC2Q02817 5179 aa6.57□□□□□ -1.36
CSNK1E-213ENST00000495232 LINC00472Q9H8W2 130 aa6.57□□□□□ -1.36
CSNK1E-213ENST00000495232 J3KT08 172 aa6.54□□□□□ -1.36
CSNK1E-213ENST00000495232 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
CSNK1E-213ENST00000495232 SMCPP49901 116 aaPredicted RBP6.53□□□□□ -1.36
CSNK1E-213ENST00000495232 LINC00313P59037 77 aa6.53□□□□□ -1.36
CSNK1E-213ENST00000495232 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
CSNK1E-213ENST00000495232 NREPQ16612 68 aa6.53□□□□□ -1.36
CSNK1E-213ENST00000495232 DSCR10P59022 87 aa6.52□□□□□ -1.37
CSNK1E-213ENST00000495232 PCOTHQ58A44 107 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms