RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 SMIM6P0DI80 62 aa13.26□□□□□ -0.29
CLIC3-203ENST00000494426 LOC105371267A0A1B0GV96 52 aa13.24□□□□□ -0.29
CLIC3-203ENST00000494426 HRCT1Q6UXD1 115 aa13.24□□□□□ -0.29
CLIC3-203ENST00000494426 A0A0G2JQZ4 141 aa13.23□□□□□ -0.29
CLIC3-203ENST00000494426 TRIAP1O43715 76 aa13.22□□□□□ -0.29
CLIC3-203ENST00000494426 FP248Q71RG6 208 aaPredicted RBP13.22□□□□□ -0.29
CLIC3-203ENST00000494426 CD164Q04900 197 aa13.2□□□□□ -0.3
CLIC3-203ENST00000494426 TPRXLQ17RH7 258 aa13.19□□□□□ -0.3
CLIC3-203ENST00000494426 RNF213Q63HN8 5207 aa13.18□□□□□ -0.3
CLIC3-203ENST00000494426 PPDPFLQ8WWR9 84 aa13.17□□□□□ -0.3
CLIC3-203ENST00000494426 IGLV8-61A0A075B6I0 122 aa13.15□□□□□ -0.3
CLIC3-203ENST00000494426 A0A1B0GX51 115 aa13.15□□□□□ -0.3
CLIC3-203ENST00000494426 F8WEM9 126 aa13.15□□□□□ -0.3
CLIC3-203ENST00000494426 SNCGO76070 127 aa13.14□□□□□ -0.31
CLIC3-203ENST00000494426 OCIAD2Q56VL3 154 aa13.13□□□□□ -0.31
CLIC3-203ENST00000494426 CLEC2BQ92478 149 aa13.13□□□□□ -0.31
CLIC3-203ENST00000494426 LIMD2Q9BT23 127 aa13.13□□□□□ -0.31
CLIC3-203ENST00000494426 PSMB2P49721 201 aa13.12□□□□□ -0.31
CLIC3-203ENST00000494426 SNHG12Q9BXW3 62 aa13.12□□□□□ -0.31
CLIC3-203ENST00000494426 KRTAP13-3Q3SY46 172 aa13.1□□□□□ -0.31
CLIC3-203ENST00000494426 IGFL1Q6UW32 110 aa13.09□□□□□ -0.31
CLIC3-203ENST00000494426 Q5XG85 94 aa13.08□□□□□ -0.32
CLIC3-203ENST00000494426 Q6JHZ5 121 aa13.08□□□□□ -0.32
CLIC3-203ENST00000494426 CDIP1Q9H305 208 aa13.08□□□□□ -0.32
CLIC3-203ENST00000494426 COX6CP09669 75 aa13.06□□□□□ -0.32
CLIC3-203ENST00000494426 H3BUT2 72 aa13.05□□□□□ -0.32
CLIC3-203ENST00000494426 M0R143 59 aa13.04□□□□□ -0.32
CLIC3-203ENST00000494426 NDUFV3P56181 108 aaKnown RBP13.03□□□□□ -0.32
CLIC3-203ENST00000494426 TSTD3H0UI37 97 aa13.02□□□□□ -0.33
CLIC3-203ENST00000494426 C1orf195Q5TG92 126 aa13□□□□□ -0.33
CLIC3-203ENST00000494426 GHRHP01286 108 aa12.99□□□□□ -0.33
CLIC3-203ENST00000494426 FABP2P12104 132 aa12.99□□□□□ -0.33
CLIC3-203ENST00000494426 TRBV7-7A0A0K0K1E9 115 aa12.98□□□□□ -0.33
CLIC3-203ENST00000494426 DNAL4O96015 105 aa12.98□□□□□ -0.33
CLIC3-203ENST00000494426 SCGB1C2P0DMR2 95 aa12.97□□□□□ -0.33
CLIC3-203ENST00000494426 ORMDL1Q9P0S3 153 aa12.97□□□□□ -0.33
CLIC3-203ENST00000494426 MUC17Q685J3 4493 aa12.96□□□□□ -0.34
CLIC3-203ENST00000494426 H3BMG7 143 aa12.95□□□□□ -0.34
CLIC3-203ENST00000494426 LST1O00453 97 aa12.94□□□□□ -0.34
CLIC3-203ENST00000494426 TCL1BO95988 128 aa12.94□□□□□ -0.34
CLIC3-203ENST00000494426 TRACP01848 142 aa12.93□□□□□ -0.34
CLIC3-203ENST00000494426 NAA38Q9BRA0 125 aaKnown RBP12.92□□□□□ -0.34
CLIC3-203ENST00000494426 H3BQ85 93 aa12.91□□□□□ -0.34
CLIC3-203ENST00000494426 ASB16-AS1Q495Z4 193 aa12.91□□□□□ -0.34
CLIC3-203ENST00000494426 Q6Q795 121 aa12.9□□□□□ -0.34
CLIC3-203ENST00000494426 TMEM256-PLSCR3K7ERE1 68 aa12.89□□□□□ -0.35
CLIC3-203ENST00000494426 XP32Q5T750 250 aa12.87□□□□□ -0.35
CLIC3-203ENST00000494426 BATFQ16520 125 aa12.86□□□□□ -0.35
CLIC3-203ENST00000494426 TEN1Q86WV5 123 aa12.86□□□□□ -0.35
CLIC3-203ENST00000494426 UBE2V1Q13404 147 aa12.85□□□□□ -0.35
CLIC3-203ENST00000494426 A0A1B0GV72 72 aa12.83□□□□□ -0.36
CLIC3-203ENST00000494426 A0A1W2PNM2 257 aa12.83□□□□□ -0.36
CLIC3-203ENST00000494426 C9orf92A6NGG3 77 aa12.83□□□□□ -0.36
CLIC3-203ENST00000494426 MUC2Q02817 5179 aa12.81□□□□□ -0.36
CLIC3-203ENST00000494426 ANKRD29Q8N6D5 301 aa12.8□□□□□ -0.36
CLIC3-203ENST00000494426 BAALC-AS2P0C853 105 aa12.79□□□□□ -0.36
CLIC3-203ENST00000494426 ATXN8Q156A1 80 aa12.79□□□□□ -0.36
CLIC3-203ENST00000494426 KRTAP9-2Q9BYQ4 174 aa12.78□□□□□ -0.36
CLIC3-203ENST00000494426 A0A087WSZ3 146 aa12.77□□□□□ -0.37
CLIC3-203ENST00000494426 SS18L2Q9UHA2 77 aa12.75□□□□□ -0.37
CLIC3-203ENST00000494426 SEC61BP60468 96 aaKnown RBP12.74□□□□□ -0.37
CLIC3-203ENST00000494426 TAX1BP3O14907 124 aa12.73□□□□□ -0.37
CLIC3-203ENST00000494426 TRBV7-4A0A0J9YYF1 115 aa12.72□□□□□ -0.37
CLIC3-203ENST00000494426 C9orf118A6NHY6 69 aa12.72□□□□□ -0.37
CLIC3-203ENST00000494426 RBM3P98179 157 aaKnown RBP12.7□□□□□ -0.38
CLIC3-203ENST00000494426 Q96NJ1 140 aa12.7□□□□□ -0.38
CLIC3-203ENST00000494426 CCKP06307 115 aa12.69□□□□□ -0.38
CLIC3-203ENST00000494426 LYRM7Q5U5X0 104 aa12.69□□□□□ -0.38
CLIC3-203ENST00000494426 KRTAP4-1Q9BYQ7 146 aa12.69□□□□□ -0.38
CLIC3-203ENST00000494426 TRBV20-1A0A075B6N2 111 aa12.68□□□□□ -0.38
CLIC3-203ENST00000494426 KRTAP9-6A0A140TA67 174 aa12.67□□□□□ -0.38
CLIC3-203ENST00000494426 A0A1W2PPM0 123 aa12.64□□□□□ -0.39
CLIC3-203ENST00000494426 DSCR8Q96T75 97 aa12.64□□□□□ -0.39
CLIC3-203ENST00000494426 C9JAW5 83 aa12.62□□□□□ -0.39
CLIC3-203ENST00000494426 PCOTHQ58A44 107 aa12.61□□□□□ -0.39
CLIC3-203ENST00000494426 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
CLIC3-203ENST00000494426 JMJD7-PLA2G4BH0Y9G9 81 aa12.58□□□□□ -0.4
CLIC3-203ENST00000494426 RPL37P61927 97 aaKnown RBP12.58□□□□□ -0.4
CLIC3-203ENST00000494426 OBSCN-AS1Q96MR7 158 aa12.58□□□□□ -0.4
CLIC3-203ENST00000494426 LINC00472Q9H8W2 130 aa12.56□□□□□ -0.4
CLIC3-203ENST00000494426 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
CLIC3-203ENST00000494426 Q6ZQT0 140 aa12.54□□□□□ -0.4
CLIC3-203ENST00000494426 FAT4Q6V0I7 4981 aa12.52□□□□□ -0.4
CLIC3-203ENST00000494426 LOC110117498A0A087WWA1 95 aa12.52□□□□□ -0.41
CLIC3-203ENST00000494426 IGKV4-1P06312 121 aa12.52□□□□□ -0.41
CLIC3-203ENST00000494426 DEFB116Q30KQ4 102 aa12.52□□□□□ -0.41
CLIC3-203ENST00000494426 COL5A1-AS1Q5SY13 56 aa12.51□□□□□ -0.41
CLIC3-203ENST00000494426 MTURNQ8N3F0 131 aa12.5□□□□□ -0.41
CLIC3-203ENST00000494426 SIGMAR1Q99720 223 aa12.5□□□□□ -0.41
CLIC3-203ENST00000494426 C14orf132Q9NPU4 83 aa12.5□□□□□ -0.41
CLIC3-203ENST00000494426 H3BT86 120 aa12.49□□□□□ -0.41
CLIC3-203ENST00000494426 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
CLIC3-203ENST00000494426 DSCR10P59022 87 aa12.46□□□□□ -0.41
CLIC3-203ENST00000494426 Q75L30 129 aa12.46□□□□□ -0.41
CLIC3-203ENST00000494426 PCP4L1A6NKN8 68 aa12.45□□□□□ -0.42
CLIC3-203ENST00000494426 PDE6GP18545 87 aa12.45□□□□□ -0.42
CLIC3-203ENST00000494426 C21orf62-AS1Q17RA5 79 aa12.44□□□□□ -0.42
CLIC3-203ENST00000494426 A0A1B0GW54 56 aa12.41□□□□□ -0.42
CLIC3-203ENST00000494426 NOTCH2NLQ7Z3S9 236 aa12.41□□□□□ -0.42
CLIC3-203ENST00000494426 C20orf166-AS1Q96NR2 134 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms