RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 FLNAP21333 2647 aaKnown RBP2.56□□□□□ -2
SNX13-210ENST00000494402 DEPDC5O75140 1603 aa2.56□□□□□ -2
SNX13-210ENST00000494402 SMG1Q96Q15 3661 aaKnown RBP2.56□□□□□ -2
SNX13-210ENST00000494402 VWFP04275 2813 aa2.55□□□□□ -2
SNX13-210ENST00000494402 URB1O60287 2271 aaKnown RBP2.55□□□□□ -2
SNX13-210ENST00000494402 BOD1L1Q8NFC6 3051 aa2.55□□□□□ -2
SNX13-210ENST00000494402 NMES1Q9C002 83 aa2.55□□□□□ -2
SNX13-210ENST00000494402 CEP295Q9C0D2 2601 aa2.55□□□□□ -2
SNX13-210ENST00000494402 GOLGA4Q13439 2230 aaKnown RBP2.54□□□□□ -2
SNX13-210ENST00000494402 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SNX13-210ENST00000494402 SERF2P84101 59 aa2.54□□□□□ -2
SNX13-210ENST00000494402 ZZEF1O43149 2961 aa2.54□□□□□ -2
SNX13-210ENST00000494402 WDR87Q6ZQQ6 2873 aa2.53□□□□□ -2
SNX13-210ENST00000494402 ITPR1Q14643 2758 aa2.53□□□□□ -2
SNX13-210ENST00000494402 MRPL33O75394 65 aaKnown RBP2.53□□□□□ -2
SNX13-210ENST00000494402 NCBP2-AS2Q69YL0 99 aa2.53□□□□□ -2
SNX13-210ENST00000494402 TNRC6CQ9HCJ0 1690 aaKnown RBP2.53□□□□□ -2
SNX13-210ENST00000494402 ETDCA0A1B0GVM5 59 aa2.52□□□□□ -2.01
SNX13-210ENST00000494402 K7EQZ3 153 aa2.52□□□□□ -2.01
SNX13-210ENST00000494402 NBEAQ8NFP9 2946 aa2.52□□□□□ -2.01
SNX13-210ENST00000494402 VPS13AQ96RL7 3174 aa2.52□□□□□ -2.01
SNX13-210ENST00000494402 RYR1P21817 5038 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 PDZD2O15018 2839 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 NF1P21359 2839 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 OTOGLQ3ZCN5 2332 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 K7EMI3 77 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 MTORP42345 2549 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 AGLP35573 1532 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 ATP7AQ04656 1500 aa2.51□□□□□ -2.01
SNX13-210ENST00000494402 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
SNX13-210ENST00000494402 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
SNX13-210ENST00000494402 DMXL1Q9Y485 3027 aa2.5□□□□□ -2.01
SNX13-210ENST00000494402 TNCP24821 2201 aa2.5□□□□□ -2.01
SNX13-210ENST00000494402 DEFB131BA0A096LNP1 70 aa2.49□□□□□ -2.01
SNX13-210ENST00000494402 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
SNX13-210ENST00000494402 LOC400499M0QZD8 3231 aa2.48□□□□□ -2.01
SNX13-210ENST00000494402 DDX60LQ5H9U9 1706 aaKnown RBP2.48□□□□□ -2.01
SNX13-210ENST00000494402 CACNA1HO95180 2353 aa2.47□□□□□ -2.01
SNX13-210ENST00000494402 COX6A2Q02221 97 aa2.47□□□□□ -2.01
SNX13-210ENST00000494402 MRPL34Q9BQ48 92 aaKnown RBP2.47□□□□□ -2.01
SNX13-210ENST00000494402 PRO0255Q9UI72 69 aa2.47□□□□□ -2.01
SNX13-210ENST00000494402 SAMD9LQ8IVG5 1584 aa2.47□□□□□ -2.01
SNX13-210ENST00000494402 COL12A1Q99715 3063 aa2.47□□□□□ -2.01
SNX13-210ENST00000494402 MYO15AQ9UKN7 3530 aa2.47□□□□□ -2.01
SNX13-210ENST00000494402 SORL1Q92673 2214 aa2.46□□□□□ -2.01
SNX13-210ENST00000494402 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
SNX13-210ENST00000494402 NRXN3Q9Y4C0 1643 aa2.46□□□□□ -2.02
SNX13-210ENST00000494402 TJP1Q07157 1748 aa2.46□□□□□ -2.02
SNX13-210ENST00000494402 M0R1W7 72 aa2.46□□□□□ -2.02
SNX13-210ENST00000494402 CMC2Q9NRP2 79 aa2.46□□□□□ -2.02
SNX13-210ENST00000494402 PRH1P02810 166 aa2.45□□□□□ -2.02
SNX13-210ENST00000494402 Q8IZM0 81 aa2.45□□□□□ -2.02
SNX13-210ENST00000494402 DSPP15924 2871 aaKnown RBP2.45□□□□□ -2.02
SNX13-210ENST00000494402 IGF2RP11717 2491 aa2.45□□□□□ -2.02
SNX13-210ENST00000494402 EP300Q09472 2414 aaPredicted RBP2.44□□□□□ -2.02
SNX13-210ENST00000494402 UTP20O75691 2785 aaKnown RBP2.44□□□□□ -2.02
SNX13-210ENST00000494402 TOP2AP11388 1531 aaKnown RBP2.44□□□□□ -2.02
SNX13-210ENST00000494402 FRYLO94915 3013 aa2.44□□□□□ -2.02
SNX13-210ENST00000494402 ABCA5Q8WWZ7 1642 aa2.44□□□□□ -2.02
SNX13-210ENST00000494402 CCL22O00626 93 aa2.44□□□□□ -2.02
SNX13-210ENST00000494402 COX6B2Q6YFQ2 88 aa2.44□□□□□ -2.02
SNX13-210ENST00000494402 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
SNX13-210ENST00000494402 FREM2Q5SZK8 3169 aa2.44□□□□□ -2.02
SNX13-210ENST00000494402 CRYBG3Q68DQ2 2970 aa2.43□□□□□ -2.02
SNX13-210ENST00000494402 CSMD1Q96PZ7 3565 aa2.43□□□□□ -2.02
SNX13-210ENST00000494402 CELSR1Q9NYQ6 3014 aa2.43□□□□□ -2.02
SNX13-210ENST00000494402 RYR3Q15413 4870 aa2.43□□□□□ -2.02
SNX13-210ENST00000494402 TLN2Q9Y4G6 2542 aa2.42□□□□□ -2.02
SNX13-210ENST00000494402 DMDP11532 3685 aa2.42□□□□□ -2.02
SNX13-210ENST00000494402 A0A0D9SG42 100 aa2.41□□□□□ -2.02
SNX13-210ENST00000494402 IGIPA6NJ69 53 aa2.41□□□□□ -2.02
SNX13-210ENST00000494402 PLNP26678 52 aa2.41□□□□□ -2.02
SNX13-210ENST00000494402 TOMM5Q8N4H5 51 aa2.41□□□□□ -2.02
SNX13-210ENST00000494402 USP9YO00507 2555 aaPredicted RBP2.41□□□□□ -2.02
SNX13-210ENST00000494402 ANKRD36CQ5JPF3 1778 aa2.41□□□□□ -2.02
SNX13-210ENST00000494402 TRIOO75962 3097 aa2.4□□□□□ -2.02
SNX13-210ENST00000494402 CACNA1EQ15878 2313 aa2.39□□□□□ -2.03
SNX13-210ENST00000494402 WDFY3Q8IZQ1 3526 aa2.39□□□□□ -2.03
SNX13-210ENST00000494402 TENM1Q9UKZ4 2725 aa2.39□□□□□ -2.03
SNX13-210ENST00000494402 HIVEP2P31629 2446 aa2.38□□□□□ -2.03
SNX13-210ENST00000494402 NBPF19A0A087WUL8 3843 aa2.38□□□□□ -2.03
SNX13-210ENST00000494402 COX6B1P14854 86 aa2.38□□□□□ -2.03
SNX13-210ENST00000494402 CRIP1P50238 77 aa2.38□□□□□ -2.03
SNX13-210ENST00000494402 PTPRQQ9UMZ3 2332 aa2.37□□□□□ -2.03
SNX13-210ENST00000494402 HYDINQ4G0P3 5121 aa2.37□□□□□ -2.03
SNX13-210ENST00000494402 F8P00451 2351 aa2.37□□□□□ -2.03
SNX13-210ENST00000494402 CELSR2Q9HCU4 2923 aa2.37□□□□□ -2.03
SNX13-210ENST00000494402 ROS1P08922 2347 aa2.36□□□□□ -2.03
SNX13-210ENST00000494402 DOPEY2Q9Y3R5 2298 aa2.36□□□□□ -2.03
SNX13-210ENST00000494402 TGP01266 2768 aa2.36□□□□□ -2.03
SNX13-210ENST00000494402 HIVEP3Q5T1R4 2406 aa2.35□□□□□ -2.03
SNX13-210ENST00000494402 IQGAP2Q13576 1575 aa2.35□□□□□ -2.03
SNX13-210ENST00000494402 NIPBLQ6KC79 2804 aaeCLIP2.35□□□□□ -2.03
SNX13-210ENST00000494402 CDKN2A-AS1Q9UH64 79 aa2.34□□□□□ -2.03
SNX13-210ENST00000494402 ITPR2Q14571 2701 aa2.34□□□□□ -2.03
SNX13-210ENST00000494402 COL6A6A6NMZ7 2263 aa2.34□□□□□ -2.04
SNX13-210ENST00000494402 EPPK1P58107 5090 aaKnown RBP2.34□□□□□ -2.04
SNX13-210ENST00000494402 NDUFA3O95167 84 aa2.33□□□□□ -2.04
SNX13-210ENST00000494402 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
SNX13-210ENST00000494402 Q5VSD8 79 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms