RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 HIGD1BQ9P298 99 aa4□□□□□ -1.77
TOP3A-207ENST00000493648 UQCR10Q9UDW1 63 aa4□□□□□ -1.77
TOP3A-207ENST00000493648 TEX49A0A1B0GTD5 131 aa3.99□□□□□ -1.77
TOP3A-207ENST00000493648 SLC25A20O43772 301 aa3.99□□□□□ -1.77
TOP3A-207ENST00000493648 LRP2P98164 4655 aa3.98□□□□□ -1.77
TOP3A-207ENST00000493648 TSTD3H0UI37 97 aa3.98□□□□□ -1.77
TOP3A-207ENST00000493648 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
TOP3A-207ENST00000493648 FP248Q71RG6 208 aaPredicted RBP3.98□□□□□ -1.77
TOP3A-207ENST00000493648 Q1RN00 199 aa3.97□□□□□ -1.77
TOP3A-207ENST00000493648 CDIP1Q9H305 208 aa3.97□□□□□ -1.77
TOP3A-207ENST00000493648 IGLV5-48A0A075B6I7 105 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 TPRXLQ17RH7 258 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 LINC00575Q6W349 94 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 Q8N377 158 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 RAB37Q96AX2 223 aa3.96□□□□□ -1.78
TOP3A-207ENST00000493648 LPAP08519 4548 aa3.95□□□□□ -1.78
TOP3A-207ENST00000493648 CFC1BP0CG36 223 aa3.95□□□□□ -1.78
TOP3A-207ENST00000493648 CFC1P0CG37 223 aa3.95□□□□□ -1.78
TOP3A-207ENST00000493648 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
TOP3A-207ENST00000493648 HRCT1Q6UXD1 115 aa3.95□□□□□ -1.78
TOP3A-207ENST00000493648 H7C2G1 150 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 SNCGO76070 127 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 LINC01547P58512 204 aaPredicted RBP3.94□□□□□ -1.78
TOP3A-207ENST00000493648 CD164Q04900 197 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 HSD52Q0P140 79 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 SMIM29Q86T20 159 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 CEND1Q8N111 149 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 LIMD2Q9BT23 127 aa3.94□□□□□ -1.78
TOP3A-207ENST00000493648 A0A0B4J2C4 111 aa3.93□□□□□ -1.78
TOP3A-207ENST00000493648 TMEM238LA0A1B0GVL6 79 aa3.93□□□□□ -1.78
TOP3A-207ENST00000493648 F8WEM9 126 aa3.93□□□□□ -1.78
TOP3A-207ENST00000493648 H0YGX0 51 aa3.93□□□□□ -1.78
TOP3A-207ENST00000493648 GHRHP01286 108 aa3.93□□□□□ -1.78
TOP3A-207ENST00000493648 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.93□□□□□ -1.78
TOP3A-207ENST00000493648 Q6ZQY7 126 aa3.93□□□□□ -1.78
TOP3A-207ENST00000493648 RNF213Q63HN8 5207 aa3.92□□□□□ -1.78
TOP3A-207ENST00000493648 PCP4L1A6NKN8 68 aa3.92□□□□□ -1.78
TOP3A-207ENST00000493648 FXYD2P54710 66 aa3.92□□□□□ -1.78
TOP3A-207ENST00000493648 PRO1854Q9UHT4 67 aa3.92□□□□□ -1.78
TOP3A-207ENST00000493648 KRTAP13-3Q3SY46 172 aa3.91□□□□□ -1.78
TOP3A-207ENST00000493648 PPDPFLQ8WWR9 84 aa3.91□□□□□ -1.78
TOP3A-207ENST00000493648 SNHG12Q9BXW3 62 aa3.91□□□□□ -1.78
TOP3A-207ENST00000493648 M0R143 59 aa3.9□□□□□ -1.79
TOP3A-207ENST00000493648 OCIAD2Q56VL3 154 aa3.9□□□□□ -1.79
TOP3A-207ENST00000493648 Q6JHZ5 121 aa3.9□□□□□ -1.79
TOP3A-207ENST00000493648 A0A0G2JQZ4 141 aa3.89□□□□□ -1.79
TOP3A-207ENST00000493648 A0A0U1RQV1 116 aa3.89□□□□□ -1.79
TOP3A-207ENST00000493648 Q5XG85 94 aa3.89□□□□□ -1.79
TOP3A-207ENST00000493648 IGLV8-61A0A075B6I0 122 aa3.88□□□□□ -1.79
TOP3A-207ENST00000493648 A0A1B0GX51 115 aa3.88□□□□□ -1.79
TOP3A-207ENST00000493648 TCL1BO95988 128 aa3.88□□□□□ -1.79
TOP3A-207ENST00000493648 K7ERJ3 54 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 PSMB2P49721 201 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
TOP3A-207ENST00000493648 BATFQ16520 125 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 CLEC2BQ92478 149 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
TOP3A-207ENST00000493648 TRIAP1O43715 76 aa3.86□□□□□ -1.79
TOP3A-207ENST00000493648 COX6CP09669 75 aa3.86□□□□□ -1.79
TOP3A-207ENST00000493648 NDUFV3P56181 108 aaKnown RBP3.86□□□□□ -1.79
TOP3A-207ENST00000493648 C1orf195Q5TG92 126 aa3.86□□□□□ -1.79
TOP3A-207ENST00000493648 IGFL1Q6UW32 110 aa3.86□□□□□ -1.79
TOP3A-207ENST00000493648 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
TOP3A-207ENST00000493648 H3BQ85 93 aa3.85□□□□□ -1.79
TOP3A-207ENST00000493648 FABP2P12104 132 aa3.85□□□□□ -1.79
TOP3A-207ENST00000493648 ASB16-AS1Q495Z4 193 aa3.85□□□□□ -1.79
TOP3A-207ENST00000493648 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
TOP3A-207ENST00000493648 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
TOP3A-207ENST00000493648 H3BUT2 72 aa3.84□□□□□ -1.79
TOP3A-207ENST00000493648 DNAL4O96015 105 aa3.84□□□□□ -1.79
TOP3A-207ENST00000493648 H3BMG7 143 aa3.83□□□□□ -1.8
TOP3A-207ENST00000493648 TAX1BP3O14907 124 aa3.83□□□□□ -1.8
TOP3A-207ENST00000493648 SCGB1C2P0DMR2 95 aa3.83□□□□□ -1.8
TOP3A-207ENST00000493648 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
TOP3A-207ENST00000493648 ORMDL1Q9P0S3 153 aa3.83□□□□□ -1.8
TOP3A-207ENST00000493648 C9orf118A6NHY6 69 aa3.82□□□□□ -1.8
TOP3A-207ENST00000493648 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
TOP3A-207ENST00000493648 Q6Q795 121 aa3.82□□□□□ -1.8
TOP3A-207ENST00000493648 TEN1Q86WV5 123 aa3.82□□□□□ -1.8
TOP3A-207ENST00000493648 NAA38Q9BRA0 125 aaKnown RBP3.82□□□□□ -1.8
TOP3A-207ENST00000493648 LST1O00453 97 aa3.81□□□□□ -1.8
TOP3A-207ENST00000493648 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
TOP3A-207ENST00000493648 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
TOP3A-207ENST00000493648 MUC2Q02817 5179 aa3.8□□□□□ -1.8
TOP3A-207ENST00000493648 TRACP01848 142 aa3.79□□□□□ -1.8
TOP3A-207ENST00000493648 ANKRD29Q8N6D5 301 aa3.79□□□□□ -1.8
TOP3A-207ENST00000493648 A0A087WSZ3 146 aa3.78□□□□□ -1.8
TOP3A-207ENST00000493648 A0A1W2PPM0 123 aa3.78□□□□□ -1.8
TOP3A-207ENST00000493648 UBE2V1Q13404 147 aa3.78□□□□□ -1.8
TOP3A-207ENST00000493648 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
TOP3A-207ENST00000493648 TRBV7-4A0A0J9YYF1 115 aa3.77□□□□□ -1.81
TOP3A-207ENST00000493648 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
TOP3A-207ENST00000493648 TRBV20-1A0A075B6N2 111 aa3.76□□□□□ -1.81
TOP3A-207ENST00000493648 A0A1B0GV72 72 aa3.76□□□□□ -1.81
TOP3A-207ENST00000493648 A0A1W2PNM2 257 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms