RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 EP300Q09472 2414 aaPredicted RBP2.38□□□□□ -2.03
SUPT20H-221ENST00000493537 SMG1Q96Q15 3661 aaKnown RBP2.38□□□□□ -2.03
SUPT20H-221ENST00000493537 SPENQ96T58 3664 aaKnown RBP2.38□□□□□ -2.03
SUPT20H-221ENST00000493537 CSMD1Q96PZ7 3565 aa2.38□□□□□ -2.03
SUPT20H-221ENST00000493537 PTPRZ1P23471 2315 aaPredicted RBP2.37□□□□□ -2.03
SUPT20H-221ENST00000493537 CEP290O15078 2479 aa2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 DCHS2Q6V1P9 2916 aa2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 DEFB109BQ30KR1 87 aa2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 TP53AIP1Q9HCN2 124 aa2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 NOP10Q9NPE3 64 aaKnown RBP2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 C6orf48Q9UBA6 75 aa2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 FN1P02751 2386 aaKnown RBP2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 C2CD3Q4AC94 2353 aa2.36□□□□□ -2.03
SUPT20H-221ENST00000493537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.36□□□□□ -2.032e-7■■■■■ 28.7
SUPT20H-221ENST00000493537 SPRR1AP35321 89 aa2.35□□□□□ -2.03
SUPT20H-221ENST00000493537 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
SUPT20H-221ENST00000493537 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
SUPT20H-221ENST00000493537 H3BUX3 64 aa2.35□□□□□ -2.03
SUPT20H-221ENST00000493537 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
SUPT20H-221ENST00000493537 ANKHD1Q8IWZ3 2542 aaKnown RBP2.34□□□□□ -2.03
SUPT20H-221ENST00000493537 ABCA2Q9BZC7 2435 aa2.34□□□□□ -2.03
SUPT20H-221ENST00000493537 WFDC13Q8IUB5 93 aa2.34□□□□□ -2.03
SUPT20H-221ENST00000493537 CHD6Q8TD26 2715 aa2.34□□□□□ -2.04
SUPT20H-221ENST00000493537 MAP1AP78559 2803 aaPredicted RBP2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 IGKV2-24A0A0C4DH68 120 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 CLPSL2Q6UWE3 100 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 ZFHX4Q86UP3 3567 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 ALMS1Q8TCU4 4167 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 BOD1L1Q8NFC6 3051 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
SUPT20H-221ENST00000493537 KRTAP13-2Q52LG2 175 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 CREBBPQ92793 2442 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 ADGRG4Q8IZF6 3080 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 WFDC10BQ8IUB3 73 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 PRO0255Q9UI72 69 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 ZDBF2Q9HCK1 2354 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 SPTA1P02549 2419 aa2.32□□□□□ -2.04
SUPT20H-221ENST00000493537 HRNRQ86YZ3 2850 aaPredicted RBP2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 ITPR1Q14643 2758 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 DMXL1Q9Y485 3027 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 LOC400499M0QZD8 3231 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 MMP24-AS1A0A0U1RRL7 71 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 KRTAP10-2P60368 255 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 IGFL1Q6UW32 110 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 DEFB105AQ8NG35 78 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 NOTCH3Q9UM47 2321 aa2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 SPTAN1Q13813 2472 aaKnown RBP2.31□□□□□ -2.04
SUPT20H-221ENST00000493537 LRBAP50851 2863 aa2.3□□□□□ -2.04
SUPT20H-221ENST00000493537 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
SUPT20H-221ENST00000493537 UBE2DNLQ8IWF7 75 aa2.3□□□□□ -2.04
SUPT20H-221ENST00000493537 ACACAQ13085 2346 aa2.3□□□□□ -2.04
SUPT20H-221ENST00000493537 ATRXP46100 2492 aa2.29□□□□□ -2.04
SUPT20H-221ENST00000493537 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
SUPT20H-221ENST00000493537 PCOTHQ58A44 107 aa2.29□□□□□ -2.04
SUPT20H-221ENST00000493537 TRIOBPQ9H2D6 2365 aa2.28□□□□□ -2.04
SUPT20H-221ENST00000493537 OTOGQ6ZRI0 2925 aa2.28□□□□□ -2.04
SUPT20H-221ENST00000493537 LELP1Q5T871 98 aa2.28□□□□□ -2.04
SUPT20H-221ENST00000493537 MRPL34Q9BQ48 92 aaKnown RBP2.28□□□□□ -2.04
SUPT20H-221ENST00000493537 ATMQ13315 3056 aa2.28□□□□□ -2.04
SUPT20H-221ENST00000493537 COL12A1Q99715 3063 aa2.28□□□□□ -2.04
SUPT20H-221ENST00000493537 SPRR1BP22528 89 aa2.27□□□□□ -2.05
SUPT20H-221ENST00000493537 KRTAP13-3Q3SY46 172 aa2.27□□□□□ -2.05
SUPT20H-221ENST00000493537 CELSR1Q9NYQ6 3014 aa2.27□□□□□ -2.05
SUPT20H-221ENST00000493537 RPL37P61927 97 aaKnown RBP2.27□□□□□ -2.05
SUPT20H-221ENST00000493537 NCOR2Q9Y618 2525 aa2.27□□□□□ -2.05
SUPT20H-221ENST00000493537 SPG11Q96JI7 2443 aa2.27□□□□□ -2.05
SUPT20H-221ENST00000493537 CELSR2Q9HCU4 2923 aa2.26□□□□□ -2.05
SUPT20H-221ENST00000493537 TENM2Q9NT68 2774 aa2.26□□□□□ -2.05
SUPT20H-221ENST00000493537 DEFB136Q30KP8 78 aa2.26□□□□□ -2.05
SUPT20H-221ENST00000493537 ASPMQ8IZT6 3477 aa2.26□□□□□ -2.05
SUPT20H-221ENST00000493537 RELNP78509 3460 aa2.26□□□□□ -2.05
SUPT20H-221ENST00000493537 ASH1LQ9NR48 2969 aaKnown RBP2.26□□□□□ -2.05
SUPT20H-221ENST00000493537 APCP25054 2843 aa2.25□□□□□ -2.05
SUPT20H-221ENST00000493537 H0YAA0 97 aa2.25□□□□□ -2.05
SUPT20H-221ENST00000493537 EYSQ5T1H1 3165 aa2.25□□□□□ -2.05
SUPT20H-221ENST00000493537 DEFB130BP0DP73 79 aa2.24□□□□□ -2.05
SUPT20H-221ENST00000493537 DEFB130AP0DP74 79 aa2.24□□□□□ -2.05
SUPT20H-221ENST00000493537 GVINP1Q7Z2Y8 2422 aa2.24□□□□□ -2.05
SUPT20H-221ENST00000493537 A0A096LPF7 62 aa2.23□□□□□ -2.05
SUPT20H-221ENST00000493537 SPTBN4Q9H254 2564 aa2.23□□□□□ -2.05
SUPT20H-221ENST00000493537 IGF2RP11717 2491 aa2.23□□□□□ -2.05
SUPT20H-221ENST00000493537 ANKRD11Q6UB99 2663 aaPredicted RBP2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 CSPG4Q6UVK1 2322 aa2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 SETXQ7Z333 2677 aaKnown RBP2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 DEFB123Q8N688 67 aa2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 NBASA2RRP1 2371 aa2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 LAMA5O15230 3695 aa2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 RIF1Q5UIP0 2472 aaKnown RBP2.22□□□□□ -2.05
SUPT20H-221ENST00000493537 TLN1Q9Y490 2541 aaKnown RBP2.21□□□□□ -2.05
SUPT20H-221ENST00000493537 SVEP1Q4LDE5 3571 aa2.21□□□□□ -2.06
SUPT20H-221ENST00000493537 BSNQ9UPA5 3926 aa2.21□□□□□ -2.06
SUPT20H-221ENST00000493537 PTPN13Q12923 2485 aa2.21□□□□□ -2.06
SUPT20H-221ENST00000493537 TLN2Q9Y4G6 2542 aa2.21□□□□□ -2.06
SUPT20H-221ENST00000493537 H3BNG1 76 aa2.21□□□□□ -2.06
SUPT20H-221ENST00000493537 AKAP9Q99996 3911 aa2.2□□□□□ -2.06
SUPT20H-221ENST00000493537 NBPF19A0A087WUL8 3843 aa2.2□□□□□ -2.06
SUPT20H-221ENST00000493537 NF1P21359 2839 aa2.2□□□□□ -2.06
SUPT20H-221ENST00000493537 KRTAP1-4P0C5Y4 121 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms