RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 Q8N9P0 234 aaPredicted RBP4.21□□□□□ -1.73
UBP1-212ENST00000492136 USP24Q9UPU5 2620 aa4.21□□□□□ -1.73
UBP1-212ENST00000492136 USP34Q70CQ2 3546 aa4.21□□□□□ -1.74
UBP1-212ENST00000492136 OXTP01178 125 aa4.21□□□□□ -1.74
UBP1-212ENST00000492136 ROMO1P60602 79 aa4.21□□□□□ -1.74
UBP1-212ENST00000492136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.21□□□□□ -1.74
UBP1-212ENST00000492136 ZCCHC13Q8WW36 166 aaKnown RBP4.21□□□□□ -1.74
UBP1-212ENST00000492136 MKI67P46013 3256 aaKnown RBP4.21□□□□□ -1.74
UBP1-212ENST00000492136 RANBP2P49792 3224 aaKnown RBP4.21□□□□□ -1.74
UBP1-212ENST00000492136 Q5VV11 94 aa4.2□□□□□ -1.74
UBP1-212ENST00000492136 Q5XG85 94 aa4.2□□□□□ -1.74
UBP1-212ENST00000492136 ATRQ13535 2644 aa4.18□□□□□ -1.74
UBP1-212ENST00000492136 MAST4O15021 2626 aa4.17□□□□□ -1.74
UBP1-212ENST00000492136 Q5W150 140 aa4.17□□□□□ -1.74
UBP1-212ENST00000492136 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
UBP1-212ENST00000492136 FP248Q71RG6 208 aaPredicted RBP4.16□□□□□ -1.74
UBP1-212ENST00000492136 LAMA2P24043 3122 aaKnown RBP4.15□□□□□ -1.74
UBP1-212ENST00000492136 MMP24-AS1A0A0U1RRL7 71 aa4.15□□□□□ -1.75
UBP1-212ENST00000492136 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
UBP1-212ENST00000492136 LCE6AA0A183 80 aa4.14□□□□□ -1.75
UBP1-212ENST00000492136 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
UBP1-212ENST00000492136 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
UBP1-212ENST00000492136 BRCA2P51587 3418 aa4.12□□□□□ -1.75
UBP1-212ENST00000492136 FREM2Q5SZK8 3169 aa4.11□□□□□ -1.75
UBP1-212ENST00000492136 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
UBP1-212ENST00000492136 MGAM2Q2M2H8 2515 aa4.11□□□□□ -1.75
UBP1-212ENST00000492136 A0A096LNT2 108 aa4.1□□□□□ -1.75
UBP1-212ENST00000492136 A0A0C4DFX4 3053 aa4.1□□□□□ -1.75
UBP1-212ENST00000492136 CENPEQ02224 2701 aa4.1□□□□□ -1.75
UBP1-212ENST00000492136 TRIOO75962 3097 aa4.09□□□□□ -1.75
UBP1-212ENST00000492136 KRTAP10-2P60368 255 aa4.09□□□□□ -1.75
UBP1-212ENST00000492136 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
UBP1-212ENST00000492136 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
UBP1-212ENST00000492136 HECTD1Q9ULT8 2610 aa4.08□□□□□ -1.76
UBP1-212ENST00000492136 Q6ZR54 194 aa4.08□□□□□ -1.76
UBP1-212ENST00000492136 Q8NDZ9 215 aa4.08□□□□□ -1.76
UBP1-212ENST00000492136 UNC80Q8N2C7 3258 aa4.07□□□□□ -1.76
UBP1-212ENST00000492136 CDH23Q9H251 3354 aa4.07□□□□□ -1.76
UBP1-212ENST00000492136 SZT2Q5T011 3432 aa4.06□□□□□ -1.76
UBP1-212ENST00000492136 HTTP42858 3142 aa4.05□□□□□ -1.76
UBP1-212ENST00000492136 SPRR1BP22528 89 aa4.05□□□□□ -1.76
UBP1-212ENST00000492136 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
UBP1-212ENST00000492136 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
UBP1-212ENST00000492136 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
UBP1-212ENST00000492136 COL6A3P12111 3177 aa4.02□□□□□ -1.77
UBP1-212ENST00000492136 KRTAP1-3Q8IUG1 177 aa4.02□□□□□ -1.77
UBP1-212ENST00000492136 A8MUU9 505 aa4.01□□□□□ -1.77
UBP1-212ENST00000492136 KRTAP10-10P60014 251 aa4□□□□□ -1.77
UBP1-212ENST00000492136 LAMA3Q16787 3333 aa4□□□□□ -1.77
UBP1-212ENST00000492136 NDUFAF8A1L188 74 aa4□□□□□ -1.77
UBP1-212ENST00000492136 SETXQ7Z333 2677 aaKnown RBP4□□□□□ -1.77
UBP1-212ENST00000492136 A8MU10 97 aa4□□□□□ -1.77
UBP1-212ENST00000492136 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
UBP1-212ENST00000492136 AKAP13Q12802 2813 aa3.99□□□□□ -1.77
UBP1-212ENST00000492136 SPRR1AP35321 89 aa3.97□□□□□ -1.77
UBP1-212ENST00000492136 SPEGQ15772 3267 aa3.97□□□□□ -1.77
UBP1-212ENST00000492136 CHD9Q3L8U1 2897 aa3.97□□□□□ -1.77
UBP1-212ENST00000492136 WDFY4Q6ZS81 3184 aa3.97□□□□□ -1.77
UBP1-212ENST00000492136 KRTAP1-1Q07627 177 aa3.96□□□□□ -1.78
UBP1-212ENST00000492136 DCHS1Q96JQ0 3298 aa3.96□□□□□ -1.78
UBP1-212ENST00000492136 PANO1I0J062 215 aa3.95□□□□□ -1.78
UBP1-212ENST00000492136 CFAP46Q8IYW2 2715 aa3.94□□□□□ -1.78
UBP1-212ENST00000492136 HELZ2Q9BYK8 2649 aaKnown RBP3.94□□□□□ -1.78
UBP1-212ENST00000492136 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
UBP1-212ENST00000492136 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
UBP1-212ENST00000492136 PRUNE2Q8WUY3 3088 aa3.92□□□□□ -1.78
UBP1-212ENST00000492136 STAB1Q9NY15 2570 aa3.92□□□□□ -1.78
UBP1-212ENST00000492136 MAP1AP78559 2803 aaPredicted RBP3.92□□□□□ -1.78
UBP1-212ENST00000492136 KRTAP1-5Q9BYS1 174 aa3.92□□□□□ -1.78
UBP1-212ENST00000492136 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
UBP1-212ENST00000492136 TEP1Q99973 2627 aaKnown RBP3.91□□□□□ -1.78
UBP1-212ENST00000492136 A0A087X002 238 aa3.91□□□□□ -1.78
UBP1-212ENST00000492136 TNP1P09430 55 aa3.9□□□□□ -1.78
UBP1-212ENST00000492136 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.78
UBP1-212ENST00000492136 ITPR3Q14573 2671 aa3.9□□□□□ -1.78
UBP1-212ENST00000492136 WDFY3Q8IZQ1 3526 aa3.89□□□□□ -1.79
UBP1-212ENST00000492136 A6NN06 94 aa3.88□□□□□ -1.79
UBP1-212ENST00000492136 FLNAP21333 2647 aaKnown RBP3.88□□□□□ -1.79
UBP1-212ENST00000492136 ASH1LQ9NR48 2969 aaKnown RBP3.88□□□□□ -1.79
UBP1-212ENST00000492136 CFAP47Q6ZTR5 3102 aa3.88□□□□□ -1.79
UBP1-212ENST00000492136 MYO15AQ9UKN7 3530 aa3.86□□□□□ -1.79
UBP1-212ENST00000492136 BAHCC1Q9P281 2608 aa3.85□□□□□ -1.79
UBP1-212ENST00000492136 LAMA1P25391 3075 aa3.85□□□□□ -1.79
UBP1-212ENST00000492136 TEX15Q9BXT5 2789 aa3.84□□□□□ -1.79
UBP1-212ENST00000492136 ASPMQ8IZT6 3477 aa3.84□□□□□ -1.79
UBP1-212ENST00000492136 TRANK1O15050 2925 aa3.84□□□□□ -1.79
UBP1-212ENST00000492136 CHD6Q8TD26 2715 aa3.84□□□□□ -1.79
UBP1-212ENST00000492136 VCANP13611 3396 aa3.84□□□□□ -1.8
UBP1-212ENST00000492136 KALRNO60229 2985 aa3.84□□□□□ -1.8
UBP1-212ENST00000492136 FRYQ5TBA9 3013 aa3.83□□□□□ -1.8
UBP1-212ENST00000492136 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
UBP1-212ENST00000492136 DSPP15924 2871 aaKnown RBP3.83□□□□□ -1.8
UBP1-212ENST00000492136 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
UBP1-212ENST00000492136 KMT2BQ9UMN6 2715 aaPredicted RBP3.82□□□□□ -1.8
UBP1-212ENST00000492136 CHD7Q9P2D1 2997 aa3.82□□□□□ -1.8
UBP1-212ENST00000492136 NOTCH1P46531 2555 aa3.82□□□□□ -1.8
UBP1-212ENST00000492136 NBEAL1Q6ZS30 2694 aa3.81□□□□□ -1.8
UBP1-212ENST00000492136 LOC400499M0QZD8 3231 aa3.81□□□□□ -1.8
UBP1-212ENST00000492136 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
UBP1-212ENST00000492136 MGAQ8IWI9 3026 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms