RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 F8WEM9 126 aa9.24□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 TRIAP1O43715 76 aa9.24□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 FAM218AQ96MZ4 157 aa9.24□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 LOC105371267A0A1B0GV96 52 aa9.23□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
MSH5-SAPCD1-206ENST00000491552 A0A1B0GX51 115 aa9.21□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 CD164Q04900 197 aa9.21□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 LIMD2Q9BT23 127 aa9.21□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 PSMB2P49721 201 aa9.2□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 OCIAD2Q56VL3 154 aa9.2□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 SNHG12Q9BXW3 62 aa9.18□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 M0R143 59 aa9.17□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 COX6CP09669 75 aa9.17□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 CLEC2BQ92478 149 aa9.17□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 Q6JHZ5 121 aa9.16□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 TSTD3H0UI37 97 aa9.15□□□□□ -0.94
MSH5-SAPCD1-206ENST00000491552 GHRHP01286 108 aa9.14□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 IGFL1Q6UW32 110 aa9.13□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 DNAL4O96015 105 aa9.12□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 Q5XG85 94 aa9.12□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 H3BUT2 72 aa9.1□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 FABP2P12104 132 aa9.1□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 NDUFV3P56181 108 aaKnown RBP9.1□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 ORMDL1Q9P0S3 153 aa9.09□□□□□ -0.95
MSH5-SAPCD1-206ENST00000491552 H3BQ85 93 aa9.07□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 TRBV7-7A0A0K0K1E9 115 aa9.06□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 TCL1BO95988 128 aa9.06□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 H3BMG7 143 aa9.05□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 LST1O00453 97 aa9.05□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 TRACP01848 142 aa9.05□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 TMEM256-PLSCR3K7ERE1 68 aa9.03□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 BATFQ16520 125 aa9.03□□□□□ -0.96
MSH5-SAPCD1-206ENST00000491552 NAA38Q9BRA0 125 aaKnown RBP9.02□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 Q6Q795 121 aa9.01□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 TEN1Q86WV5 123 aa8.99□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 UBE2V1Q13404 147 aa8.98□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 A0A1B0GV72 72 aa8.97□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 ATXN8Q156A1 80 aa8.97□□□□□ -0.97
MSH5-SAPCD1-206ENST00000491552 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 XP32Q5T750 250 aa8.95□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 SS18L2Q9UHA2 77 aa8.95□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 MUC17Q685J3 4493 aa8.95□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 A0A1W2PNM2 257 aa8.94□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 A0A087WSZ3 146 aa8.93□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 BAALC-AS2P0C853 105 aa8.93□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 SEC61BP60468 96 aaKnown RBP8.9□□□□□ -0.98
MSH5-SAPCD1-206ENST00000491552 TRBV20-1A0A075B6N2 111 aa8.89□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 C9orf118A6NHY6 69 aa8.89□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 CCKP06307 115 aa8.87□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 DSCR8Q96T75 97 aa8.86□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPM0 123 aa8.85□□□□□ -0.99
MSH5-SAPCD1-206ENST00000491552 C9JAW5 83 aa8.83□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 Q96NJ1 140 aa8.83□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 VPS25Q9BRG1 176 aa8.83□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 MUC2Q02817 5179 aa8.82□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 A0A0U1RQV1 116 aa8.81□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 JMJD7-PLA2G4BH0Y9G9 81 aa8.81□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 OBSCN-AS1Q96MR7 158 aa8.78□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 SIGMAR1Q99720 223 aa8.78□□□□□ -1
MSH5-SAPCD1-206ENST00000491552 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 PCOTHQ58A44 107 aa8.77□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 H3BT86 120 aa8.76□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 Q6ZQT0 140 aa8.76□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 IGKV4-1P06312 121 aa8.75□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 SPCS1Q9Y6A9 102 aa8.75□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 PDE6GP18545 87 aa8.74□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 LINC00472Q9H8W2 130 aa8.74□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 C14orf132Q9NPU4 83 aa8.74□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 PCP4L1A6NKN8 68 aa8.73□□□□□ -1.01
MSH5-SAPCD1-206ENST00000491552 DEFB116Q30KQ4 102 aa8.71□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 Q75L30 129 aa8.7□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 A0A1B0GW54 56 aa8.69□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 DSCR10P59022 87 aa8.69□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 J3KT08 172 aa8.65□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 LINC00313P59037 77 aa8.65□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 C20orf166-AS1Q96NR2 134 aa8.65□□□□□ -1.02
MSH5-SAPCD1-206ENST00000491552 K7EP34 96 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 816.8 ms