RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 H3BSH0 61 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 M0QY20 66 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 SPINK1P00995 79 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 ESPL1Q14674 2120 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 TOMM7Q9P0U1 55 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 ANKRD36CQ5JPF3 1778 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 DDX60Q8IY21 1712 aaKnown RBP0.24□□□□□ -2.37
CCDC39-206ENST00000489868 CLTCL1P53675 1640 aa0.24□□□□□ -2.37
CCDC39-206ENST00000489868 F5P12259 2224 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 H0YGG7 62 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 PRCDQ00LT1 54 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 DEFB135Q30KP9 77 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 LINC01590Q5TEZ4 76 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 CLPSL2Q6UWE3 100 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 DEFB104AQ8WTQ1 72 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 NINQ8N4C6 2090 aa0.23□□□□□ -2.37
CCDC39-206ENST00000489868 MED13LQ71F56 2210 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 GCC2Q8IWJ2 1684 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 M0R2T5 61 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 SPINK6Q6UWN8 80 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 CACNA1EQ15878 2313 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 ANKRD36A6QL64 1941 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 ASXL3Q9C0F0 2248 aa0.22□□□□□ -2.37
CCDC39-206ENST00000489868 ABCA1O95477 2261 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 M0QZ58 72 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 SMR3AQ99954 134 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 FRAS1Q86XX4 4008 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.21□□□□□ -2.38
CCDC39-206ENST00000489868 JMJD1CQ15652 2540 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 TNCP24821 2201 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 FAM208BQ5VWN6 2430 aa0.21□□□□□ -2.38
CCDC39-206ENST00000489868 ANKRD17O75179 2603 aaKnown RBP0.2□□□□□ -2.38
CCDC39-206ENST00000489868 SYNE2Q8WXH0 6885 aaKnown RBP0.2□□□□□ -2.38
CCDC39-206ENST00000489868 MYO7AQ13402 2215 aa0.2□□□□□ -2.38
CCDC39-206ENST00000489868 ASCC3Q8N3C0 2202 aaKnown RBP0.2□□□□□ -2.38
CCDC39-206ENST00000489868 H3BNG1 76 aa0.2□□□□□ -2.38
CCDC39-206ENST00000489868 K7EIM0 57 aa0.2□□□□□ -2.38
CCDC39-206ENST00000489868 TNP1P09430 55 aa0.2□□□□□ -2.38
CCDC39-206ENST00000489868 U3KQA8 63 aa0.2□□□□□ -2.38
CCDC39-206ENST00000489868 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
CCDC39-206ENST00000489868 CADP27708 2225 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 DEFB108AA8MXU0 73 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 KRTAP2-3P0C7H8 128 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 SPART-AS1P0CW21 52 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 RPL39P5Q59GN2 51 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 TMEM167AQ8TBQ9 72 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 KRTAP2-4Q9BYR9 128 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 KRTAP2-1Q9BYU5 128 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 GOLGA4Q13439 2230 aaKnown RBP0.19□□□□□ -2.38
CCDC39-206ENST00000489868 CACNA1CQ13936 2221 aa0.19□□□□□ -2.38
CCDC39-206ENST00000489868 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
CCDC39-206ENST00000489868 PRM1P04553 51 aa0.18□□□□□ -2.38
CCDC39-206ENST00000489868 DEFB110Q30KQ9 67 aa0.18□□□□□ -2.38
CCDC39-206ENST00000489868 URB1O60287 2271 aaKnown RBP0.17□□□□□ -2.38
CCDC39-206ENST00000489868 KNTC1P50748 2209 aa0.17□□□□□ -2.38
CCDC39-206ENST00000489868 TTC28Q96AY4 2481 aa0.17□□□□□ -2.38
CCDC39-206ENST00000489868 PIEZO2Q9H5I5 2752 aa0.17□□□□□ -2.38
CCDC39-206ENST00000489868 PLCE1Q9P212 2302 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 PTPRQQ9UMZ3 2332 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 A0A096LNI7 61 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 H3BUX3 64 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 APELAP0DMC3 54 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 HTN1P15515 57 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 RHPN1-AS1Q9BWJ2 59 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 MEGF8Q7Z7M0 2845 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 CNOT1A5YKK6 2376 aaKnown RBP0.16□□□□□ -2.38
CCDC39-206ENST00000489868 NAV3Q8IVL0 2385 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 ZDBF2Q9HCK1 2354 aa0.16□□□□□ -2.38
CCDC39-206ENST00000489868 NAV2Q8IVL1 2488 aa0.15□□□□□ -2.38
CCDC39-206ENST00000489868 PTPRZ1P23471 2315 aaPredicted RBP0.15□□□□□ -2.38
CCDC39-206ENST00000489868 SPTBN2O15020 2390 aa0.15□□□□□ -2.39
CCDC39-206ENST00000489868 DEFB1P60022 68 aa0.15□□□□□ -2.39
CCDC39-206ENST00000489868 DEFB136Q30KP8 78 aa0.15□□□□□ -2.39
CCDC39-206ENST00000489868 USF3Q68DE3 2245 aa0.15□□□□□ -2.39
CCDC39-206ENST00000489868 REV3LO60673 3130 aa0.15□□□□□ -2.39
CCDC39-206ENST00000489868 CELSR2Q9HCU4 2923 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 TENM4Q6N022 2769 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 ABCA2Q9BZC7 2435 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 MAST4O15021 2626 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 AHCTF1Q8WYP5 2266 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 SPRR2DP22532 72 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 SPRR2BP35325 72 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 DEFB124Q8NES8 71 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 CACNA1HO95180 2353 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 TPRP12270 2363 aaKnown RBP0.14□□□□□ -2.39
CCDC39-206ENST00000489868 C2CD3Q4AC94 2353 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 BPTFQ12830 3046 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 ASH1LQ9NR48 2969 aaKnown RBP0.14□□□□□ -2.39
CCDC39-206ENST00000489868 PIEZO1Q92508 2521 aa0.14□□□□□ -2.39
CCDC39-206ENST00000489868 DOPEY2Q9Y3R5 2298 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 SPTBN1Q01082 2364 aaKnown RBP0.13□□□□□ -2.39
CCDC39-206ENST00000489868 CSMD3Q7Z407 3707 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 EP300Q09472 2414 aaPredicted RBP0.13□□□□□ -2.39
CCDC39-206ENST00000489868 STATHP02808 62 aa0.13□□□□□ -2.39
CCDC39-206ENST00000489868 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
CCDC39-206ENST00000489868 MT1AP04731 61 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms