RNA–Protein interactions for RNA: ENST00000488471.1

KIF3A-207, Transcript of kinesin family member 3A, humanhuman

TSL 2

Gene KIF3A, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-207ENST00000488471 H3BUA1 57 aa0.84□□□□□ -2.27
KIF3A-207ENST00000488471 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
KIF3A-207ENST00000488471 AKAP6Q13023 2319 aa0.84□□□□□ -2.28
KIF3A-207ENST00000488471 ALMS1Q8TCU4 4167 aa0.83□□□□□ -2.28
KIF3A-207ENST00000488471 SPINK1P00995 79 aa0.83□□□□□ -2.28
KIF3A-207ENST00000488471 TFF3Q07654 80 aa0.83□□□□□ -2.28
KIF3A-207ENST00000488471 BDP1A6H8Y1 2624 aa0.83□□□□□ -2.28
KIF3A-207ENST00000488471 REV3LO60673 3130 aa0.82□□□□□ -2.28
KIF3A-207ENST00000488471 FAM208AQ9UK61 1670 aaKnown RBP0.81□□□□□ -2.28
KIF3A-207ENST00000488471 KNL1Q8NG31 2342 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 S4R3F8 94 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 CHD9Q3L8U1 2897 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 LMO7Q8WWI1 1683 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 CELSR2Q9HCU4 2923 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 TOGARAM1Q9Y4F4 1720 aa0.81□□□□□ -2.28
KIF3A-207ENST00000488471 ATP7AQ04656 1500 aa0.8□□□□□ -2.28
KIF3A-207ENST00000488471 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
KIF3A-207ENST00000488471 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
KIF3A-207ENST00000488471 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
KIF3A-207ENST00000488471 TPRP12270 2363 aaKnown RBP0.79□□□□□ -2.28
KIF3A-207ENST00000488471 CDC42BPAQ5VT25 1732 aa0.79□□□□□ -2.28
KIF3A-207ENST00000488471 PIEZO1Q92508 2521 aa0.79□□□□□ -2.28
KIF3A-207ENST00000488471 CSMD3Q7Z407 3707 aa0.78□□□□□ -2.28
KIF3A-207ENST00000488471 NDUFA1O15239 70 aa0.78□□□□□ -2.28
KIF3A-207ENST00000488471 PRLHP81277 87 aa0.78□□□□□ -2.28
KIF3A-207ENST00000488471 SAMD9LQ8IVG5 1584 aa0.78□□□□□ -2.29
KIF3A-207ENST00000488471 PDE4DIPQ5VU43 2346 aa0.77□□□□□ -2.29
KIF3A-207ENST00000488471 ABCA2Q9BZC7 2435 aa0.77□□□□□ -2.29
KIF3A-207ENST00000488471 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
KIF3A-207ENST00000488471 WFDC10BQ8IUB3 73 aa0.77□□□□□ -2.29
KIF3A-207ENST00000488471 U3KQA8 63 aa0.77□□□□□ -2.29
KIF3A-207ENST00000488471 DEFB106AQ8N104 65 aa0.76□□□□□ -2.29
KIF3A-207ENST00000488471 KAAG1Q9UBP8 84 aa0.76□□□□□ -2.29
KIF3A-207ENST00000488471 IQGAP1P46940 1657 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 TRPM2O94759 1503 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 ANK2Q01484 3957 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 M0R2T5 61 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 DEFB135Q30KP9 77 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 KIF21BO75037 1637 aa0.75□□□□□ -2.29
KIF3A-207ENST00000488471 FRAS1Q86XX4 4008 aa0.74□□□□□ -2.29
KIF3A-207ENST00000488471 NFAT5O94916 1531 aa0.74□□□□□ -2.29
KIF3A-207ENST00000488471 H0YGG7 62 aa0.74□□□□□ -2.29
KIF3A-207ENST00000488471 SNRPGP62308 76 aaKnown RBP0.74□□□□□ -2.29
KIF3A-207ENST00000488471 DDX60Q8IY21 1712 aaKnown RBP0.74□□□□□ -2.29
KIF3A-207ENST00000488471 PCNX1Q96RV3 2341 aa0.73□□□□□ -2.29
KIF3A-207ENST00000488471 DSPP15924 2871 aaKnown RBP0.73□□□□□ -2.29
KIF3A-207ENST00000488471 IGLV5-48A0A075B6I7 105 aa0.73□□□□□ -2.29
KIF3A-207ENST00000488471 DEFB131AP59861 70 aa0.72□□□□□ -2.29
KIF3A-207ENST00000488471 NOP10Q9NPE3 64 aaKnown RBP0.72□□□□□ -2.29
KIF3A-207ENST00000488471 TRANK1O15050 2925 aa0.71□□□□□ -2.29
KIF3A-207ENST00000488471 SPTA1P02549 2419 aa0.71□□□□□ -2.3
KIF3A-207ENST00000488471 FBN2P35556 2912 aa0.71□□□□□ -2.3
KIF3A-207ENST00000488471 VWFP04275 2813 aa0.7□□□□□ -2.3
KIF3A-207ENST00000488471 APCP25054 2843 aa0.7□□□□□ -2.3
KIF3A-207ENST00000488471 ATRQ13535 2644 aa0.7□□□□□ -2.3
KIF3A-207ENST00000488471 CHD6Q8TD26 2715 aa0.7□□□□□ -2.3
KIF3A-207ENST00000488471 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
KIF3A-207ENST00000488471 CSPG4Q6UVK1 2322 aa0.69□□□□□ -2.3
KIF3A-207ENST00000488471 CHD8Q9HCK8 2581 aa0.69□□□□□ -2.3
KIF3A-207ENST00000488471 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
KIF3A-207ENST00000488471 MMP24-AS1A0A0U1RRL7 71 aa0.67□□□□□ -2.3
KIF3A-207ENST00000488471 PRM1P04553 51 aa0.67□□□□□ -2.3
KIF3A-207ENST00000488471 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
KIF3A-207ENST00000488471 IGF2RP11717 2491 aa0.66□□□□□ -2.3
KIF3A-207ENST00000488471 HECTD1Q9ULT8 2610 aa0.66□□□□□ -2.3
KIF3A-207ENST00000488471 EP300Q09472 2414 aaPredicted RBP0.65□□□□□ -2.31
KIF3A-207ENST00000488471 BSNQ9UPA5 3926 aa0.64□□□□□ -2.31
KIF3A-207ENST00000488471 PTPN13Q12923 2485 aa0.63□□□□□ -2.31
KIF3A-207ENST00000488471 PKD1L2Q7Z442 2459 aa0.62□□□□□ -2.31
KIF3A-207ENST00000488471 TNXBP22105 4242 aa0.62□□□□□ -2.31
KIF3A-207ENST00000488471 NCOR1O75376 2440 aa0.62□□□□□ -2.31
KIF3A-207ENST00000488471 A8MTW9 85 aa0.62□□□□□ -2.31
KIF3A-207ENST00000488471 PRRC2CQ9Y520 2896 aaKnown RBP0.62□□□□□ -2.31
KIF3A-207ENST00000488471 AKAP13Q12802 2813 aa0.61□□□□□ -2.31
KIF3A-207ENST00000488471 FAT2Q9NYQ8 4349 aa0.61□□□□□ -2.31
KIF3A-207ENST00000488471 C9orf92A6NGG3 77 aa0.61□□□□□ -2.31
KIF3A-207ENST00000488471 M0QY20 66 aa0.61□□□□□ -2.31
KIF3A-207ENST00000488471 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
KIF3A-207ENST00000488471 ZFYVE26Q68DK2 2539 aa0.61□□□□□ -2.31
KIF3A-207ENST00000488471 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
KIF3A-207ENST00000488471 OTOGQ6ZRI0 2925 aa0.6□□□□□ -2.31
KIF3A-207ENST00000488471 PRKDCP78527 4128 aaKnown RBP0.59□□□□□ -2.31
KIF3A-207ENST00000488471 POLR2KP53803 58 aaKnown RBP0.59□□□□□ -2.31
KIF3A-207ENST00000488471 CLTCL1P53675 1640 aa0.59□□□□□ -2.32
KIF3A-207ENST00000488471 M0QZ58 72 aa0.58□□□□□ -2.32
KIF3A-207ENST00000488471 CREBBPQ92793 2442 aa0.57□□□□□ -2.32
KIF3A-207ENST00000488471 CELSR1Q9NYQ6 3014 aa0.57□□□□□ -2.32
KIF3A-207ENST00000488471 DUOX1Q9NRD9 1551 aa0.57□□□□□ -2.32
KIF3A-207ENST00000488471 HUWE1Q7Z6Z7 4374 aaKnown RBP0.56□□□□□ -2.32
KIF3A-207ENST00000488471 CEP290O15078 2479 aa0.56□□□□□ -2.32
KIF3A-207ENST00000488471 MAP1BP46821 2468 aaKnown RBP0.56□□□□□ -2.32
KIF3A-207ENST00000488471 SPRR2DP22532 72 aa0.56□□□□□ -2.32
KIF3A-207ENST00000488471 CLPSL2Q6UWE3 100 aa0.56□□□□□ -2.32
KIF3A-207ENST00000488471 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
KIF3A-207ENST00000488471 H3BNG1 76 aa0.55□□□□□ -2.32
KIF3A-207ENST00000488471 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
KIF3A-207ENST00000488471 TNRC18O15417 2968 aaPredicted RBP0.54□□□□□ -2.32
KIF3A-207ENST00000488471 MROH2BQ7Z745 1585 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms