RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 SPTA1P02549 2419 aa0.6□□□□□ -2.31
SGIP1-211ENST00000484988 CHD9Q3L8U1 2897 aa0.6□□□□□ -2.31
SGIP1-211ENST00000484988 LYNX1G3V0Z9 82 aa0.6□□□□□ -2.31
SGIP1-211ENST00000484988 FANCD2Q9BXW9 1451 aa0.6□□□□□ -2.31
SGIP1-211ENST00000484988 CROCC2H7BZ55 1655 aa0.59□□□□□ -2.31
SGIP1-211ENST00000484988 KIAA0586Q9BVV6 1533 aa0.59□□□□□ -2.31
SGIP1-211ENST00000484988 KRTAP2-3P0C7H8 128 aa0.59□□□□□ -2.31
SGIP1-211ENST00000484988 KRTAP2-4Q9BYR9 128 aa0.59□□□□□ -2.31
SGIP1-211ENST00000484988 KRTAP2-1Q9BYU5 128 aa0.59□□□□□ -2.31
SGIP1-211ENST00000484988 H3BUA1 57 aa0.58□□□□□ -2.32
SGIP1-211ENST00000484988 SMR3AQ99954 134 aa0.58□□□□□ -2.32
SGIP1-211ENST00000484988 S4R3F8 94 aa0.58□□□□□ -2.32
SGIP1-211ENST00000484988 AGLP35573 1532 aa0.58□□□□□ -2.32
SGIP1-211ENST00000484988 ZFYVE26Q68DK2 2539 aa0.58□□□□□ -2.32
SGIP1-211ENST00000484988 FBN2P35556 2912 aa0.58□□□□□ -2.32
SGIP1-211ENST00000484988 RNF17Q9BXT8 1623 aaKnown RBP0.57□□□□□ -2.32
SGIP1-211ENST00000484988 C3P01024 1663 aa0.57□□□□□ -2.32
SGIP1-211ENST00000484988 SMIM2Q9BVW6 85 aa0.57□□□□□ -2.32
SGIP1-211ENST00000484988 SYCP2Q9BX26 1530 aa0.57□□□□□ -2.32
SGIP1-211ENST00000484988 ATRQ13535 2644 aa0.57□□□□□ -2.32
SGIP1-211ENST00000484988 CHD8Q9HCK8 2581 aa0.56□□□□□ -2.32
SGIP1-211ENST00000484988 TENM3Q9P273 2699 aa0.56□□□□□ -2.32
SGIP1-211ENST00000484988 DEPDC5O75140 1603 aa0.56□□□□□ -2.32
SGIP1-211ENST00000484988 LY75O60449 1722 aa0.55□□□□□ -2.32
SGIP1-211ENST00000484988 TOGARAM1Q9Y4F4 1720 aa0.55□□□□□ -2.32
SGIP1-211ENST00000484988 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
SGIP1-211ENST00000484988 MAST1Q9Y2H9 1570 aa0.55□□□□□ -2.32
SGIP1-211ENST00000484988 H3BNG1 76 aa0.55□□□□□ -2.32
SGIP1-211ENST00000484988 KIF1AQ12756 1690 aa0.55□□□□□ -2.32
SGIP1-211ENST00000484988 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
SGIP1-211ENST00000484988 A0A1B0GUL6 1792 aa0.54□□□□□ -2.32
SGIP1-211ENST00000484988 CHD6Q8TD26 2715 aa0.54□□□□□ -2.32
SGIP1-211ENST00000484988 ABCC8Q09428 1581 aa0.53□□□□□ -2.32
SGIP1-211ENST00000484988 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
SGIP1-211ENST00000484988 PRM1P04553 51 aa0.53□□□□□ -2.32
SGIP1-211ENST00000484988 UNC79Q9P2D8 2635 aa0.53□□□□□ -2.32
SGIP1-211ENST00000484988 AHNAK2Q8IVF2 5795 aa0.53□□□□□ -2.32
SGIP1-211ENST00000484988 WNK1Q9H4A3 2382 aa0.53□□□□□ -2.33
SGIP1-211ENST00000484988 NAV2Q8IVL1 2488 aa0.53□□□□□ -2.33
SGIP1-211ENST00000484988 NOP10Q9NPE3 64 aaKnown RBP0.52□□□□□ -2.33
SGIP1-211ENST00000484988 DDX60Q8IY21 1712 aaKnown RBP0.52□□□□□ -2.33
SGIP1-211ENST00000484988 PCNX1Q96RV3 2341 aa0.52□□□□□ -2.33
SGIP1-211ENST00000484988 PTPN13Q12923 2485 aa0.51□□□□□ -2.33
SGIP1-211ENST00000484988 CDC42BPAQ5VT25 1732 aa0.51□□□□□ -2.33
SGIP1-211ENST00000484988 ADCY10Q96PN6 1610 aa0.51□□□□□ -2.33
SGIP1-211ENST00000484988 DSPP15924 2871 aaKnown RBP0.51□□□□□ -2.33
SGIP1-211ENST00000484988 NBASA2RRP1 2371 aa0.5□□□□□ -2.33
SGIP1-211ENST00000484988 VWFP04275 2813 aa0.5□□□□□ -2.33
SGIP1-211ENST00000484988 UBR5O95071 2799 aaPredicted RBP0.5□□□□□ -2.33
SGIP1-211ENST00000484988 IGLV5-48A0A075B6I7 105 aa0.5□□□□□ -2.33
SGIP1-211ENST00000484988 ZNF469Q96JG9 3925 aaPredicted RBP0.5□□□□□ -2.33
SGIP1-211ENST00000484988 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
SGIP1-211ENST00000484988 APC2O95996 2303 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 OTOGQ6ZRI0 2925 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 LINC01546A6NGU7 62 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 PKD1L2Q7Z442 2459 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 LMO7Q8WWI1 1683 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 HECTD1Q9ULT8 2610 aa0.49□□□□□ -2.33
SGIP1-211ENST00000484988 TRANK1O15050 2925 aa0.48□□□□□ -2.33
SGIP1-211ENST00000484988 CREBBPQ92793 2442 aa0.47□□□□□ -2.33
SGIP1-211ENST00000484988 BPTFQ12830 3046 aa0.47□□□□□ -2.33
SGIP1-211ENST00000484988 ABCA5Q8WWZ7 1642 aa0.47□□□□□ -2.33
SGIP1-211ENST00000484988 NDUFA1O15239 70 aa0.47□□□□□ -2.33
SGIP1-211ENST00000484988 DEFB110Q30KQ9 67 aa0.47□□□□□ -2.33
SGIP1-211ENST00000484988 M0QY20 66 aa0.46□□□□□ -2.34
SGIP1-211ENST00000484988 EP300Q09472 2414 aaPredicted RBP0.46□□□□□ -2.34
SGIP1-211ENST00000484988 NCOR2Q9Y618 2525 aa0.45□□□□□ -2.34
SGIP1-211ENST00000484988 CEP290O15078 2479 aa0.44□□□□□ -2.34
SGIP1-211ENST00000484988 PKD1L1Q8TDX9 2849 aa0.44□□□□□ -2.34
SGIP1-211ENST00000484988 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
SGIP1-211ENST00000484988 NRXN3Q9Y4C0 1643 aa0.44□□□□□ -2.34
SGIP1-211ENST00000484988 ALMS1Q8TCU4 4167 aa0.44□□□□□ -2.34
SGIP1-211ENST00000484988 HIVEP3Q5T1R4 2406 aa0.44□□□□□ -2.34
SGIP1-211ENST00000484988 REV3LO60673 3130 aa0.43□□□□□ -2.34
SGIP1-211ENST00000484988 ACANP16112 2415 aa0.43□□□□□ -2.34
SGIP1-211ENST00000484988 POLR2KP53803 58 aaKnown RBP0.43□□□□□ -2.34
SGIP1-211ENST00000484988 DEFB131AP59861 70 aa0.43□□□□□ -2.34
SGIP1-211ENST00000484988 AKAP13Q12802 2813 aa0.43□□□□□ -2.34
SGIP1-211ENST00000484988 PRRC2CQ9Y520 2896 aaKnown RBP0.43□□□□□ -2.34
SGIP1-211ENST00000484988 IQGAP2Q13576 1575 aa0.42□□□□□ -2.34
SGIP1-211ENST00000484988 MMP24-AS1A0A0U1RRL7 71 aa0.42□□□□□ -2.34
SGIP1-211ENST00000484988 IQGAP1P46940 1657 aa0.41□□□□□ -2.34
SGIP1-211ENST00000484988 SPART-AS1P0CW21 52 aa0.41□□□□□ -2.34
SGIP1-211ENST00000484988 TOMM7Q9P0U1 55 aa0.41□□□□□ -2.34
SGIP1-211ENST00000484988 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
SGIP1-211ENST00000484988 ANK2Q01484 3957 aa0.41□□□□□ -2.34
SGIP1-211ENST00000484988 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
SGIP1-211ENST00000484988 TNRC18O15417 2968 aaPredicted RBP0.4□□□□□ -2.34
SGIP1-211ENST00000484988 C9orf92A6NGG3 77 aa0.4□□□□□ -2.35
SGIP1-211ENST00000484988 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
SGIP1-211ENST00000484988 DMBT1Q9UGM3 2413 aaPredicted RBP0.4□□□□□ -2.35
SGIP1-211ENST00000484988 BSNQ9UPA5 3926 aa0.4□□□□□ -2.35
SGIP1-211ENST00000484988 NFAT5O94916 1531 aa0.39□□□□□ -2.35
SGIP1-211ENST00000484988 CELSR1Q9NYQ6 3014 aa0.39□□□□□ -2.35
SGIP1-211ENST00000484988 ACACAQ13085 2346 aa0.39□□□□□ -2.35
SGIP1-211ENST00000484988 SRRM2Q9UQ35 2752 aaKnown RBP0.39□□□□□ -2.35
SGIP1-211ENST00000484988 FLNBO75369 2602 aaKnown RBP0.38□□□□□ -2.35
SGIP1-211ENST00000484988 SPTBN4Q9H254 2564 aa0.38□□□□□ -2.35
SGIP1-211ENST00000484988 FAM208AQ9UK61 1670 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms