RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 SSBP3-AS1Q7Z2R9 100 aa15.22■□□□□ 0.03
GTF3C4-202ENST00000483873 NAA38Q9BRA0 125 aaKnown RBP15.22■□□□□ 0.03
GTF3C4-202ENST00000483873 C4orf48Q5BLP8 95 aa15.21■□□□□ 0.03
GTF3C4-202ENST00000483873 IGLV5-48A0A075B6I7 105 aa15.2■□□□□ 0.02
GTF3C4-202ENST00000483873 TEX49A0A1B0GTD5 131 aa15.17■□□□□ 0.02
GTF3C4-202ENST00000483873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.17■□□□□ 0.02
GTF3C4-202ENST00000483873 A0A1B0GX51 115 aa15.16■□□□□ 0.02
GTF3C4-202ENST00000483873 SCGB1C2P0DMR2 95 aa15.16■□□□□ 0.02
GTF3C4-202ENST00000483873 LAMTOR3Q9UHA4 124 aa15.16■□□□□ 0.02
GTF3C4-202ENST00000483873 TAX1BP3O14907 124 aa15.15■□□□□ 0.02
GTF3C4-202ENST00000483873 Q8N377 158 aa15.15■□□□□ 0.02
GTF3C4-202ENST00000483873 SNCGO76070 127 aa15.13■□□□□ 0.01
GTF3C4-202ENST00000483873 SPINK1P00995 79 aa15.13■□□□□ 0.01
GTF3C4-202ENST00000483873 SMIM29Q86T20 159 aa15.12■□□□□ 0.01
GTF3C4-202ENST00000483873 RNF213Q63HN8 5207 aa15.1■□□□□ 0.01
GTF3C4-202ENST00000483873 H3BUT2 72 aa15.1■□□□□ 0.01
GTF3C4-202ENST00000483873 C9orf118A6NHY6 69 aa15.09■□□□□ 0.01
GTF3C4-202ENST00000483873 LST1O00453 97 aa15.08■□□□□ 0
GTF3C4-202ENST00000483873 COL5A1-AS1Q5SY13 56 aa15.06■□□□□ 0
GTF3C4-202ENST00000483873 TCL1BO95988 128 aa15.04■□□□□ -0
GTF3C4-202ENST00000483873 DNAL4O96015 105 aa15.04■□□□□ -0
GTF3C4-202ENST00000483873 OCIAD2Q56VL3 154 aa15.04■□□□□ -0
GTF3C4-202ENST00000483873 TRACP01848 142 aa15.03■□□□□ -0
GTF3C4-202ENST00000483873 RPS29P62273 56 aaKnown RBP15.03■□□□□ -0
GTF3C4-202ENST00000483873 PPDPFLQ8WWR9 84 aa15.02■□□□□ -0
GTF3C4-202ENST00000483873 IGLV7-46A0A075B6I9 117 aa15.01□□□□□ -0.01
GTF3C4-202ENST00000483873 HRCT1Q6UXD1 115 aa15.01□□□□□ -0.01
GTF3C4-202ENST00000483873 LYRM7Q5U5X0 104 aa15□□□□□ -0.01
GTF3C4-202ENST00000483873 A0A1W2PPM0 123 aa15□□□□□ -0.01
GTF3C4-202ENST00000483873 ATXN8Q156A1 80 aa14.99□□□□□ -0.01
GTF3C4-202ENST00000483873 ORMDL1Q9P0S3 153 aa14.99□□□□□ -0.01
GTF3C4-202ENST00000483873 A0A0G2JQZ4 141 aa14.97□□□□□ -0.01
GTF3C4-202ENST00000483873 GHRHP01286 108 aa14.94□□□□□ -0.02
GTF3C4-202ENST00000483873 FP248Q71RG6 208 aaPredicted RBP14.94□□□□□ -0.02
GTF3C4-202ENST00000483873 TRBV20-1A0A075B6N2 111 aa14.93□□□□□ -0.02
GTF3C4-202ENST00000483873 F8WEM9 126 aa14.93□□□□□ -0.02
GTF3C4-202ENST00000483873 FABP2P12104 132 aa14.93□□□□□ -0.02
GTF3C4-202ENST00000483873 TPRXLQ17RH7 258 aa14.92□□□□□ -0.02
GTF3C4-202ENST00000483873 NDUFV3P56181 108 aaKnown RBP14.9□□□□□ -0.02
GTF3C4-202ENST00000483873 CD164Q04900 197 aa14.89□□□□□ -0.03
GTF3C4-202ENST00000483873 IGLV8-61A0A075B6I0 122 aa14.88□□□□□ -0.03
GTF3C4-202ENST00000483873 H3BQ85 93 aa14.88□□□□□ -0.03
GTF3C4-202ENST00000483873 TMEM256-PLSCR3K7ERE1 68 aa14.88□□□□□ -0.03
GTF3C4-202ENST00000483873 LIMD2Q9BT23 127 aa14.87□□□□□ -0.03
GTF3C4-202ENST00000483873 BAALC-AS2P0C853 105 aa14.84□□□□□ -0.03
GTF3C4-202ENST00000483873 CDIP1Q9H305 208 aa14.84□□□□□ -0.03
GTF3C4-202ENST00000483873 SPCS1Q9Y6A9 102 aa14.84□□□□□ -0.03
GTF3C4-202ENST00000483873 UBE2V1Q13404 147 aa14.83□□□□□ -0.04
GTF3C4-202ENST00000483873 C9JAW5 83 aa14.82□□□□□ -0.04
GTF3C4-202ENST00000483873 H3BMG7 143 aa14.82□□□□□ -0.04
GTF3C4-202ENST00000483873 IGFL1Q6UW32 110 aa14.82□□□□□ -0.04
GTF3C4-202ENST00000483873 KRTAP13-3Q3SY46 172 aa14.81□□□□□ -0.04
GTF3C4-202ENST00000483873 Q6JHZ5 121 aa14.8□□□□□ -0.04
GTF3C4-202ENST00000483873 A0A1B0GV72 72 aa14.78□□□□□ -0.04
GTF3C4-202ENST00000483873 ANKRD29Q8N6D5 301 aa14.76□□□□□ -0.05
GTF3C4-202ENST00000483873 MTURNQ8N3F0 131 aa14.75□□□□□ -0.05
GTF3C4-202ENST00000483873 Q5XG85 94 aa14.75□□□□□ -0.05
GTF3C4-202ENST00000483873 MUC17Q685J3 4493 aa14.74□□□□□ -0.05
GTF3C4-202ENST00000483873 K7EP34 96 aa14.74□□□□□ -0.05
GTF3C4-202ENST00000483873 H3BT86 120 aa14.68□□□□□ -0.06
GTF3C4-202ENST00000483873 C1orf195Q5TG92 126 aa14.67□□□□□ -0.06
GTF3C4-202ENST00000483873 TRBV7-7A0A0K0K1E9 115 aa14.66□□□□□ -0.06
GTF3C4-202ENST00000483873 RBM3P98179 157 aaKnown RBP14.66□□□□□ -0.06
GTF3C4-202ENST00000483873 TRBV7-4A0A0J9YYF1 115 aa14.63□□□□□ -0.07
GTF3C4-202ENST00000483873 GTF2H5Q6ZYL4 71 aa14.63□□□□□ -0.07
GTF3C4-202ENST00000483873 A0A1W2PNM2 257 aa14.62□□□□□ -0.07
GTF3C4-202ENST00000483873 SMCPP49901 116 aaPredicted RBP14.62□□□□□ -0.07
GTF3C4-202ENST00000483873 Q6Q795 121 aa14.62□□□□□ -0.07
GTF3C4-202ENST00000483873 JMJD7-PLA2G4BH0Y9G9 81 aa14.61□□□□□ -0.07
GTF3C4-202ENST00000483873 TEN1Q86WV5 123 aa14.61□□□□□ -0.07
GTF3C4-202ENST00000483873 PRO0461Q9UI25 63 aa14.61□□□□□ -0.07
GTF3C4-202ENST00000483873 MUC2Q02817 5179 aa14.6□□□□□ -0.07
GTF3C4-202ENST00000483873 DSCR8Q96T75 97 aa14.59□□□□□ -0.07
GTF3C4-202ENST00000483873 OBSCN-AS1Q96MR7 158 aa14.58□□□□□ -0.08
GTF3C4-202ENST00000483873 C9orf92A6NGG3 77 aa14.57□□□□□ -0.08
GTF3C4-202ENST00000483873 XP32Q5T750 250 aa14.56□□□□□ -0.08
GTF3C4-202ENST00000483873 CCKP06307 115 aa14.55□□□□□ -0.08
GTF3C4-202ENST00000483873 ASB16-AS1Q495Z4 193 aa14.55□□□□□ -0.08
GTF3C4-202ENST00000483873 C14orf132Q9NPU4 83 aa14.53□□□□□ -0.08
GTF3C4-202ENST00000483873 A0A087WSZ3 146 aa14.51□□□□□ -0.09
GTF3C4-202ENST00000483873 LOC110117498A0A087WWA1 95 aa14.5□□□□□ -0.09
GTF3C4-202ENST00000483873 VPS25Q9BRG1 176 aa14.5□□□□□ -0.09
GTF3C4-202ENST00000483873 Q6ZQT0 140 aa14.49□□□□□ -0.09
GTF3C4-202ENST00000483873 A0A1B0GV90 55 aa14.49□□□□□ -0.09
GTF3C4-202ENST00000483873 F8W1H4 67 aa14.45□□□□□ -0.1
GTF3C4-202ENST00000483873 PDE6GP18545 87 aa14.44□□□□□ -0.1
GTF3C4-202ENST00000483873 SS18L2Q9UHA2 77 aa14.44□□□□□ -0.1
GTF3C4-202ENST00000483873 SEC61BP60468 96 aaKnown RBP14.42□□□□□ -0.1
GTF3C4-202ENST00000483873 A0A0U1RQV1 116 aa14.41□□□□□ -0.1
GTF3C4-202ENST00000483873 KRTAP4-1Q9BYQ7 146 aa14.35□□□□□ -0.11
GTF3C4-202ENST00000483873 Q96NJ1 140 aa14.34□□□□□ -0.11
GTF3C4-202ENST00000483873 ETDBQ3ZM63 59 aa14.33□□□□□ -0.11
GTF3C4-202ENST00000483873 C21orf62-AS1Q17RA5 79 aa14.32□□□□□ -0.12
GTF3C4-202ENST00000483873 A0A1B0GW54 56 aa14.3□□□□□ -0.12
GTF3C4-202ENST00000483873 PCOTHQ58A44 107 aa14.28□□□□□ -0.12
GTF3C4-202ENST00000483873 LINC00472Q9H8W2 130 aa14.26□□□□□ -0.13
GTF3C4-202ENST00000483873 RPL37P61927 97 aaKnown RBP14.24□□□□□ -0.13
GTF3C4-202ENST00000483873 DEFB116Q30KQ4 102 aa14.23□□□□□ -0.13
GTF3C4-202ENST00000483873 FAT4Q6V0I7 4981 aa14.21□□□□□ -0.14
GTF3C4-202ENST00000483873 SIGMAR1Q99720 223 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms