RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 BAGE2Q86Y30 109 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 LENEPQ9Y5L5 61 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 ARL2-SNX15V9GYD0 113 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 SVEP1Q4LDE5 3571 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 CSMD2Q7Z408 3487 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 CELSR1Q9NYQ6 3014 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 CSPG4Q6UVK1 2322 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 DCHS2Q6V1P9 2916 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 MED13LQ71F56 2210 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 TRRAPQ9Y4A5 3859 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
MCF2-207ENST00000483690 JMJD1CQ15652 2540 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 ADGRG4Q8IZF6 3080 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 CCDC168Q8NDH2 2452 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 AKAP6Q13023 2319 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 PDZD2O15018 2839 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.21
MCF2-207ENST00000483690 SAA2P0DJI9 122 aaPredicted RBP1.25□□□□□ -2.21
MCF2-207ENST00000483690 PROK2Q9HC23 129 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 NDUFA4L2Q9NRX3 87 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 PSENENQ9NZ42 101 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 UBE2D4Q9Y2X8 147 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 NBEAL2Q6ZNJ1 2754 aa1.25□□□□□ -2.21
MCF2-207ENST00000483690 CUBNO60494 3623 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 NBDYA0A0U1RRE5 68 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 CLPSL1A2RUU4 121 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 HMGN4O00479 90 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 TFF1P04155 84 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 ATXN8Q156A1 80 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 SFTA2Q6UW10 78 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 DEFB107AQ8IZN7 70 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 TOMM5Q8N4H5 51 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 AMELXQ99217 191 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 FAM103A1Q9BTL3 118 aaKnown RBP1.24□□□□□ -2.21
MCF2-207ENST00000483690 GNG13Q9P2W3 67 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 U3KQA8 63 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 PKDREJQ9NTG1 2253 aa1.24□□□□□ -2.21
MCF2-207ENST00000483690 APCP25054 2843 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 TRBV7-4A0A0J9YYF1 115 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 C10orf142B7Z368 130 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 H3BVH4 76 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 LEPROTL1O95214 131 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 ARMS2P0C7Q2 107 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 ESPL1Q14674 2120 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 C5orf56Q8N8D9 126 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 COL6A5A8TX70 2615 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 ACANP16112 2415 aa1.23□□□□□ -2.21
MCF2-207ENST00000483690 MYO7BQ6PIF6 2116 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 DNAH7Q8WXX0 4024 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 TLN2Q9Y4G6 2542 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 D6R8Y8 96 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 SSBP1Q04837 148 aaKnown RBP1.22□□□□□ -2.21
MCF2-207ENST00000483690 SPINK13Q1W4C9 94 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 DEFB133Q30KQ1 61 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 MUSTN1Q8IVN3 82 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 DEFB106AQ8N104 65 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 NMES1Q9C002 83 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 TENM3Q9P273 2699 aa1.22□□□□□ -2.21
MCF2-207ENST00000483690 ABCA4P78363 2273 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 PPP1R17O96001 155 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 SPAG11BQ08648 103 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 FAM74A4Q5TZK3 123 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 NCBP2-AS2Q69YL0 99 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 SPAG11AQ6PDA7 123 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 SMIM4Q8WVI0 70 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 PPP1R1CQ8WVI7 109 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 PKD1L1Q8TDX9 2849 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
MCF2-207ENST00000483690 PRKDCP78527 4128 aaKnown RBP1.2□□□□□ -2.22
MCF2-207ENST00000483690 LINC01549A6NIU2 74 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 LY6G6CO95867 125 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 CCL3L1P16619 93 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 CMC2Q9NRP2 79 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 LINC00846Q9NV44 126 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 PLAC8Q9NZF1 115 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 HECTD4Q9Y4D8 3996 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 DNAJC13O75165 2243 aa1.2□□□□□ -2.22
MCF2-207ENST00000483690 LYSTQ99698 3801 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 HRNRQ86YZ3 2850 aaPredicted RBP1.19□□□□□ -2.22
MCF2-207ENST00000483690 SPTY2D1-AS1A0A0U1RR47 76 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 PRH1P02810 166 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 S100A3P33764 101 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 CCL18P55774 89 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 FDCSPQ8NFU4 85 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 COX7B2Q8TF08 81 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 LINC01558Q9Y6Z2 57 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 R4GMQ9 66 aa1.19□□□□□ -2.22
MCF2-207ENST00000483690 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
MCF2-207ENST00000483690 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 CACNA1CQ13936 2221 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 A0A087WVE0 104 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 A0A1B0GUT8 65 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 F8VRH5 84 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 UQCR11O14957 56 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 NDUFB1O75438 58 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 IFI6P09912 130 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 SPINK7P58062 85 aa1.18□□□□□ -2.22
MCF2-207ENST00000483690 ABRACLQ9P1F3 81 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms