RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 EYSQ5T1H1 3165 aa0.63□□□□□ -2.31
LAPTM4A-202ENST00000483117 USF3Q68DE3 2245 aa0.63□□□□□ -2.31
LAPTM4A-202ENST00000483117 LELP1Q5T871 98 aa0.63□□□□□ -2.31
LAPTM4A-202ENST00000483117 ANKRD11Q6UB99 2663 aaPredicted RBP0.63□□□□□ -2.31
LAPTM4A-202ENST00000483117 MYO18BQ8IUG5 2567 aa0.63□□□□□ -2.31
LAPTM4A-202ENST00000483117 CFAP47Q6ZTR5 3102 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 EPG5Q9HCE0 2579 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 GOLGB1Q14789 3259 aaKnown RBP0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 EP400Q96L91 3159 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 RYR1P21817 5038 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 MUC3AQ02505 3323 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 KLK9Q2XQG4 91 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 NRXN3Q9Y4C0 1643 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 UNC80Q8N2C7 3258 aa0.62□□□□□ -2.31
LAPTM4A-202ENST00000483117 KIAA1109Q2LD37 5005 aa0.61□□□□□ -2.31
LAPTM4A-202ENST00000483117 IAPPP10997 89 aa0.61□□□□□ -2.31
LAPTM4A-202ENST00000483117 BIRC6Q9NR09 4857 aa0.61□□□□□ -2.31
LAPTM4A-202ENST00000483117 POLQO75417 2590 aa0.61□□□□□ -2.31
LAPTM4A-202ENST00000483117 ABCA12Q86UK0 2595 aa0.61□□□□□ -2.31
LAPTM4A-202ENST00000483117 DOPEY1Q5JWR5 2465 aa0.61□□□□□ -2.31
LAPTM4A-202ENST00000483117 REV3LO60673 3130 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 AGLP35573 1532 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 ITPR3Q14573 2671 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 SMR3AQ99954 134 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 C6orf48Q9UBA6 75 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 MKI67P46013 3256 aaKnown RBP0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 RYR3Q15413 4870 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 ZNF292O60281 2723 aa0.6□□□□□ -2.31
LAPTM4A-202ENST00000483117 IQGAP2Q13576 1575 aa0.59□□□□□ -2.31
LAPTM4A-202ENST00000483117 TPRP12270 2363 aaKnown RBP0.59□□□□□ -2.31
LAPTM4A-202ENST00000483117 PRH1P02810 166 aa0.59□□□□□ -2.31
LAPTM4A-202ENST00000483117 U3KQA8 63 aa0.59□□□□□ -2.31
LAPTM4A-202ENST00000483117 HECTD1Q9ULT8 2610 aa0.59□□□□□ -2.32
LAPTM4A-202ENST00000483117 GCN1Q92616 2671 aaKnown RBP0.59□□□□□ -2.32
LAPTM4A-202ENST00000483117 BPTFQ12830 3046 aa0.59□□□□□ -2.32
LAPTM4A-202ENST00000483117 RANBP2P49792 3224 aaKnown RBP0.59□□□□□ -2.32
LAPTM4A-202ENST00000483117 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 SPTBN4Q9H254 2564 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 ABCA2Q9BZC7 2435 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 ANKRD36CQ5JPF3 1778 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 KIF21BO75037 1637 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 DEFB130BP0DP73 79 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 DEFB130AP0DP74 79 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 HYDINQ4G0P3 5121 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 KALRNO60229 2985 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 WDFY4Q6ZS81 3184 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 MYO9AB2RTY4 2548 aa0.58□□□□□ -2.32
LAPTM4A-202ENST00000483117 BRCA2P51587 3418 aa0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 EPPK1P58107 5090 aaKnown RBP0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 DCHS1Q96JQ0 3298 aa0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 DNAH12Q6ZR08 3092 aa0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 LINC01546A6NGU7 62 aa0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 SPTBN1Q01082 2364 aaKnown RBP0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 CELSR3Q9NYQ7 3312 aa0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
LAPTM4A-202ENST00000483117 CFAP54Q96N23 3096 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 CELSR2Q9HCU4 2923 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 CDC42BPAQ5VT25 1732 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 CENPFP49454 3210 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 UBR5O95071 2799 aaPredicted RBP0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 ZFYVE26Q68DK2 2539 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 A0A1B0GUL6 1792 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 SMIM27A0A1W2PRY6 76 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 H3BUA1 57 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 TOMM5Q8N4H5 51 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 LINC00308Q8TCZ7 52 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 KRTAP2-1Q9BYU5 128 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 ABRACLQ9P1F3 81 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 ACACBO00763 2458 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 LAMA3Q16787 3333 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 NCOR2Q9Y618 2525 aa0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 SMG1Q96Q15 3661 aaKnown RBP0.56□□□□□ -2.32
LAPTM4A-202ENST00000483117 RELNP78509 3460 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 FBN2P35556 2912 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 RYR2Q92736 4967 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 USP34Q70CQ2 3546 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 SPEGQ15772 3267 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 HERC2O95714 4834 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 KMT2CQ8NEZ4 4911 aaKnown RBP0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 C5orf42Q9H799 3197 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 LOC730098B7Z3J9 87 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 WT1-ASQ06250 92 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 MUC2Q02817 5179 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 BSNQ9UPA5 3926 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 CSMD3Q7Z407 3707 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 TOGARAM1Q9Y4F4 1720 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 NBEAL2Q6ZNJ1 2754 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
LAPTM4A-202ENST00000483117 PRUNE2Q8WUY3 3088 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 ASPMQ8IZT6 3477 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 F8P00451 2351 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 RPS27P42677 84 aaKnown RBP0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 RPS27LQ71UM5 84 aaKnown RBP0.54□□□□□ -2.32
LAPTM4A-202ENST00000483117 CFAP46Q8IYW2 2715 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms